Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 12:28:15 (17976): vboxwrapper version 26210
2025-10-11 12:28:15 (17976): BOINC client version: 8.2.5
2025-10-11 12:28:15 (17976): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-11 12:28:16 (17976): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 12:28:16 (17976): Create VM. (boinc_1433b851b472a4ea, slot#3)
2025-10-11 12:28:16 (17976): Setting Memory Size for VM. (4096MB)
2025-10-11 12:28:17 (17976): Setting CPU Count for VM. (1)
2025-10-11 12:28:17 (17976): Setting Chipset Options for VM.
2025-10-11 12:28:17 (17976): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 12:28:17 (17976): Setting Boot Options for VM.
2025-10-11 12:28:18 (17976): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 12:28:18 (17976): Enabling VM Network Access.
2025-10-11 12:28:18 (17976): Disabling USB Support for VM.
2025-10-11 12:28:19 (17976): Disabling COM Port Support for VM.
2025-10-11 12:28:19 (17976): Disabling LPT Port Support for VM.
2025-10-11 12:28:19 (17976): Disabling Audio Support for VM.
2025-10-11 12:28:20 (17976): Disabling Clipboard Support for VM.
2025-10-11 12:28:20 (17976): Disabling Drag and Drop Support for VM.
2025-10-11 12:28:20 (17976): Adding storage controller(s) to VM.
2025-10-11 12:28:20 (17976): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 12:28:21 (17976): Adding VirtualBox Guest Additions to VM.
2025-10-11 12:28:21 (17976): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 12:28:21 (17976): forwarding host port 55811 to guest port 80
2025-10-11 12:28:22 (17976): Enabling remote desktop for VM.
2025-10-11 12:28:22 (17976): Enabling shared directory for VM.
2025-10-11 12:28:23 (17976): Starting VM using VBoxManage interface. (boinc_1433b851b472a4ea, slot#3)
2025-10-11 12:28:32 (17976): Successfully started VM. (PID = '16032')
2025-10-11 12:28:32 (17976): Reporting VM Process ID to BOINC.
2025-10-11 12:28:32 (17976): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-11 12:28:32 (17976): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 12:28:32 (17976): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 12:28:32 (17976): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 12:28:32 (17976): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 12:28:32 (17976): Detected: Web Application Enabled (http://localhost:55811)
2025-10-11 12:28:32 (17976): Detected: Remote Desktop Enabled (localhost:55812)
2025-10-11 12:28:32 (17976): Preference change detected
2025-10-11 12:28:32 (17976): Setting CPU throttle for VM. (100%)
2025-10-11 12:28:32 (17976): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 12:28:34 (17976): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 12:28:34 (17976): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 12:28:39 (17976): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 12:28:39 (17976): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 12:28:39 (17976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 12:28:49 (17976): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 12:28:49 (17976): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-11 12:29:10 (17976): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.000334 main     Log opened 2025-10-11T12:29:08.869410000Z
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.000524 main     OS Product: Linux
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.000570 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.000606 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.000645 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.000646 main     Process ID: 1266
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.000647 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 12:29:10 (17976): Guest Log: 00:00:00.012922 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 12:29:10 (17976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 12:29:10 (17976): Guest Log: [INFO] Mounting shared directory
2025-10-11 12:29:10 (17976): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 12:29:14 (17976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 12:29:14 (17976): Guest Log: [INFO] Detected branch: prod
2025-10-11 12:29:14 (17976): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 12:29:14 (17976): Guest Log: Copying input files
2025-10-11 12:29:17 (17976): Guest Log: Copied input files into RunAtlas.
2025-10-11 12:29:17 (17976): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-10-11 12:29:20 (17976): Guest Log: 00:00:10.051315 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 491 823 000ns (GuestNow=1 760 178 560 427 225 000 ns GuestLast=1 760 185 748 919 048 000 ns fSetTimeLastLoop=true )
2025-10-11 12:29:25 (17976): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 12:29:26 (17976): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 12:29:26 (17976): Guest Log: 2.6.3.0 1535 0 31556 151581 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-10-11 12:29:27 (17976): Guest Log: copied the webapp to /var/www
2025-10-11 12:29:27 (17976): Guest Log: core_number=1
2025-10-11 12:29:27 (17976): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 12:29:27 (17976): Guest Log:  *** Starting ATLAS job. (PandaID=6837508483 taskID=46676269) ***
2025-10-11 14:09:44 (17976): Status Report: Elapsed Time: '6000.000000'
2025-10-11 14:09:44 (17976): Status Report: CPU Time: '5914.671875'
2025-10-11 15:50:37 (17976): Status Report: Elapsed Time: '12000.000000'
2025-10-11 15:50:37 (17976): Status Report: CPU Time: '11936.593750'
2025-10-11 17:31:39 (17976): Status Report: Elapsed Time: '18000.000000'
2025-10-11 17:31:39 (17976): Status Report: CPU Time: '17963.218750'
2025-10-11 19:12:41 (17976): Status Report: Elapsed Time: '24000.000000'
2025-10-11 19:12:41 (17976): Status Report: CPU Time: '23990.031250'
2025-10-11 20:53:45 (17976): Status Report: Elapsed Time: '30000.000000'
2025-10-11 20:53:45 (17976): Status Report: CPU Time: '30017.421875'
2025-10-11 22:34:53 (17976): Status Report: Elapsed Time: '36000.018616'
2025-10-11 22:34:53 (17976): Status Report: CPU Time: '36046.812500'
2025-10-12 00:16:02 (17976): Status Report: Elapsed Time: '42000.018616'
2025-10-12 00:16:02 (17976): Status Report: CPU Time: '42081.500000'
2025-10-12 01:56:51 (17976): Status Report: Elapsed Time: '48000.018616'
2025-10-12 01:56:51 (17976): Status Report: CPU Time: '48102.984375'
2025-10-12 03:36:59 (17976): Status Report: Elapsed Time: '54000.018616'
2025-10-12 03:36:59 (17976): Status Report: CPU Time: '54091.562500'
2025-10-12 04:46:10 (17976): Guest Log:  *** Job finished ***
2025-10-12 04:46:10 (17976): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:45:35,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:45:35,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:04,515 | INFO     | [monitor] cgroup control has ended
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:04,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629262714688)>', '<ExcThread(monitor, started 140628813924096)>']
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:05,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:05,133 | INFO     | [monitor] control thread has ended
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,760 | INFO     | all workflow threads have been joined
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,761 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,761 | INFO     | traces error code: 0
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,873 [wrapper] ==== pilot stdout END ====
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,878 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,883 [wrapper] pilotpid: 5859
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,888 [wrapper] Pilot exit status: 0
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,938 [wrapper] pandaids: 6837508483
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,971 [wrapper] cleanup supervisor_pilot 22198 5860
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,978 [wrapper] Test setup, not cleaning
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,983 [wrapper] apfmon messages muted
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,988 [wrapper] ==== wrapper stdout END ====
2025-10-12 04:46:10 (17976): Guest Log: 2025-10-12 02:46:09,994 [wrapper] ==== wrapper stderr END ====
2025-10-12 04:46:10 (17976): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 04:46:10 (17976): Guest Log:     "exeErrorCode": 0,
2025-10-12 04:46:10 (17976): Guest Log:     "exeErrorDiag": "",
2025-10-12 04:46:10 (17976): Guest Log:     "pilotErrorCode": 0,
2025-10-12 04:46:10 (17976): Guest Log:     "pilotErrorDiag": "",
2025-10-12 04:46:10 (17976): Guest Log:  *** Listing of results directory ***
2025-10-12 04:46:10 (17976): Guest Log: total 223652
2025-10-12 04:46:10 (17976): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 06:56 pilot3.tar.gz
2025-10-12 04:46:10 (17976): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 07:07 queuedata.json
2025-10-12 04:46:10 (17976): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 07:07 runpilot2-wrapper.sh
2025-10-12 04:46:10 (17976): Guest Log: -rwxr-xr-x. 1 atlas atlas      9440 Oct 11 10:29 init_data.xml
2025-10-12 04:46:10 (17976): Guest Log: -rwxr-xr-x. 1 atlas atlas    569679 Oct 11 10:29 input.tar.gz
2025-10-12 04:46:10 (17976): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 11 10:29 start_atlas.sh
2025-10-12 04:46:10 (17976): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 10:29 EVNT.46676267._001397.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 04:46:10 (17976): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 11 10:29 pandaJob.out
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas    975517 Oct 11 10:29 agis_schedconf.cvmfs.json
2025-10-12 04:46:10 (17976): Guest Log: drwx------. 5 atlas atlas      4096 Oct 11 10:30 pilot3
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas 207388542 Oct 12 02:43 HITS.46676269._034354.pool.root.1
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas      1021 Oct 12 02:44 memory_monitor_summary.json
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 02:44 agis_ddmendpoints.agis.ALL.json
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas    973902 Oct 12 02:44 log.46676269._034354.job.log.tgz.1
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas      7808 Oct 12 02:45 heartbeat.json
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 02:45 pilot_heartbeat.json
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 12 02:46 pilotlog.txt
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas   7923306 Oct 12 02:46 log.46676269._034354.job.log.1
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 02:46 output.list
2025-10-12 04:46:10 (17976): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 02:46 runtime_log
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas   8919040 Oct 12 02:46 result.tar.gz
2025-10-12 04:46:10 (17976): Guest Log: -rw-r--r--. 1 atlas atlas      8513 Oct 12 02:46 runtime_log.err
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas       656 Oct 12 02:46 5i0LDmEPMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhhcNDmpTKiMo.diag
2025-10-12 04:46:10 (17976): Guest Log: Looking for outputfile HITS.46676269._034354.pool.root.1
2025-10-12 04:46:10 (17976): Guest Log: HITS file was successfully produced
2025-10-12 04:46:10 (17976): Guest Log: -rw-------. 1 atlas atlas 207388542 Oct 12 02:43 /home/atlas/RunAtlas/HITS.46676269._034354.pool.root.1
2025-10-12 04:46:12 (17976): Guest Log: Successfully finished the ATLAS job!
2025-10-12 04:46:12 (17976): Guest Log: Copying the results back to the shared directory!
2025-10-12 04:46:12 (17976): Guest Log:  *** Contents of shared directory: ***
2025-10-12 04:46:12 (17976): Guest Log: total 430004
2025-10-12 04:46:12 (17976): Guest Log: -rwxrwxrwx. 1 root root 223409073 Oct 11 10:28 ATLAS.root_0
2025-10-12 04:46:12 (17976): Guest Log: -rwxrwxrwx. 1 root root 207388542 Oct 12 02:46 HITS.pool.root.1
2025-10-12 04:46:12 (17976): Guest Log: -rwxrwxrwx. 1 root root      9440 Oct 11 10:28 init_data.xml
2025-10-12 04:46:12 (17976): Guest Log: -rwxrwxrwx. 1 root root    569679 Oct 10 14:47 input.tar.gz
2025-10-12 04:46:12 (17976): Guest Log: -rwxrwxrwx. 1 root root   8919040 Oct 12 02:46 result.tar.gz
2025-10-12 04:46:12 (17976): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 14:47 start_atlas.sh
2025-10-12 04:46:12 (17976): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 04:46:12 (17976): VM Completion File Detected.
2025-10-12 04:46:12 (17976): Powering off VM.
2025-10-12 04:46:14 (17976): Successfully stopped VM.
2025-10-12 04:46:14 (17976): Deregistering VM. (boinc_1433b851b472a4ea, slot#3)
2025-10-12 04:46:14 (17976): Removing network bandwidth throttle group from VM.
2025-10-12 04:46:14 (17976): Removing VM from VirtualBox.
2025-10-12 04:46:19 (17976): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN