Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:43:16 (437184): wrapper (7.7.26015): starting
10:43:16 (437184): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 10:43:16] Arguments: --nthreads 8
[2025-10-10 10:43:16] Threads: 8
[2025-10-10 10:43:16] Checking for CVMFS
[2025-10-10 10:43:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:43:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:43:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:43:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:43:16] 2.13.2.0 9460 31484 229176 151548 3 195 28038793 32935937 3513 16776704 0 92096482 99.669 79484058 30079 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 10:43:16] CVMFS is ok
[2025-10-10 10:43:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:43:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:43:16] Further information can be found at the LHC@home message board.
[2025-10-10 10:43:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:43:16] Checking for apptainer binary...
[2025-10-10 10:43:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:43:16] Running /usr/bin/apptainer --version
[2025-10-10 10:43:16] apptainer version 1.4.3-1.el9
[2025-10-10 10:43:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:43:16] c-4-11.aglt2.org
[2025-10-10 10:43:16] apptainer works
[2025-10-10 10:43:16] Set ATHENA_PROC_NUMBER=8
[2025-10-10 10:43:16] Set ATHENA_CORE_NUMBER=8
[2025-10-10 10:43:16] Starting ATLAS job with PandaID=6837454899
[2025-10-10 10:43:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:32:43]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:32:43] 2025-10-10 16:32:10,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:32:43] 2025-10-10 16:32:10,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:32:43] 2025-10-10 16:32:10,960 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:32:43] 2025-10-10 16:32:10,961 | INFO     | sum of square deviations: 379832238.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,961 | INFO     | sum of deviations: 2647461122.000003
[2025-10-10 12:32:43] 2025-10-10 16:32:10,962 | INFO     | mean x: 1760110664.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,962 | INFO     | mean y: 2086786.7663551401
[2025-10-10 12:32:43] 2025-10-10 16:32:10,962 | INFO     | -- intersect: -12266025519.587193
[2025-10-10 12:32:43] 2025-10-10 16:32:10,962 | INFO     | intersect: -12266025519.587193
[2025-10-10 12:32:43] 2025-10-10 16:32:10,962 | INFO     | chi2: 2.2688507897320385
[2025-10-10 12:32:43] 2025-10-10 16:32:10,963 | INFO     | sum of square deviations: 329031285.5
[2025-10-10 12:32:43] 2025-10-10 16:32:10,963 | INFO     | sum of deviations: 9221906677.999996
[2025-10-10 12:32:43] 2025-10-10 16:32:10,963 | INFO     | mean x: 1760110511.5
[2025-10-10 12:32:43] 2025-10-10 16:32:10,963 | INFO     | mean y: 2105819.156862745
[2025-10-10 12:32:43] 2025-10-10 16:32:10,964 | INFO     | -- intersect: -49329296984.54352
[2025-10-10 12:32:43] 2025-10-10 16:32:10,964 | INFO     | intersect: -49329296984.54352
[2025-10-10 12:32:43] 2025-10-10 16:32:10,964 | INFO     | chi2: 1.4828375763127462
[2025-10-10 12:32:43] 2025-10-10 16:32:10,964 | INFO     | current chi2=1.4828375763127462 (change=34.64367145589702 %)
[2025-10-10 12:32:43] 2025-10-10 16:32:10,964 | INFO     | sum of square deviations: 282974608.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,965 | INFO     | sum of deviations: 8508163917.000003
[2025-10-10 12:32:43] 2025-10-10 16:32:10,965 | INFO     | mean x: 1760110359.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,965 | INFO     | mean y: 2103453.711340206
[2025-10-10 12:32:43] 2025-10-10 16:32:10,965 | INFO     | -- intersect: -52918925582.15792
[2025-10-10 12:32:43] 2025-10-10 16:32:10,965 | INFO     | intersect: -52918925582.15792
[2025-10-10 12:32:43] 2025-10-10 16:32:10,966 | INFO     | chi2: 1.4842831331977964
[2025-10-10 12:32:43] 2025-10-10 16:32:10,966 | INFO     | current chi2=1.4842831331977964 (change=-0.09748585469790733 %)
[2025-10-10 12:32:43] 2025-10-10 16:32:10,966 | INFO     | right removable region: 96
[2025-10-10 12:32:43] 2025-10-10 16:32:10,966 | INFO     | sum of square deviations: 329031285.5
[2025-10-10 12:32:43] 2025-10-10 16:32:10,967 | INFO     | sum of deviations: -11467384357.5
[2025-10-10 12:32:43] 2025-10-10 16:32:10,967 | INFO     | mean x: 1760110816.5
[2025-10-10 12:32:43] 2025-10-10 16:32:10,967 | INFO     | mean y: 2128455.068627451
[2025-10-10 12:32:43] 2025-10-10 16:32:10,967 | INFO     | -- intersect: 61345435715.12749
[2025-10-10 12:32:43] 2025-10-10 16:32:10,967 | INFO     | intersect: 61345435715.12749
[2025-10-10 12:32:43] 2025-10-10 16:32:10,968 | INFO     | chi2: 0.8648374960981873
[2025-10-10 12:32:43] 2025-10-10 16:32:10,968 | INFO     | current chi2=0.8648374960981873 (change=61.88213433813651 %)
[2025-10-10 12:32:43] 2025-10-10 16:32:10,968 | INFO     | sum of square deviations: 282974608.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,968 | INFO     | sum of deviations: -11555149602.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,969 | INFO     | mean x: 1760110969.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,969 | INFO     | mean y: 2128712.494845361
[2025-10-10 12:32:43] 2025-10-10 16:32:10,969 | INFO     | -- intersect: 71875522960.3497
[2025-10-10 12:32:43] 2025-10-10 16:32:10,969 | INFO     | intersect: 71875522960.3497
[2025-10-10 12:32:43] 2025-10-10 16:32:10,969 | INFO     | chi2: 0.8543657767133477
[2025-10-10 12:32:43] 2025-10-10 16:32:10,969 | INFO     | current chi2=0.8543657767133477 (change=1.2108308707802273 %)
[2025-10-10 12:32:43] 2025-10-10 16:32:10,970 | INFO     | left removable region: 20
[2025-10-10 12:32:43] 2025-10-10 16:32:10,970 | INFO     | sum of square deviations: 136095575.0
[2025-10-10 12:32:43] 2025-10-10 16:32:10,970 | INFO     | sum of deviations: -3700690995.5
[2025-10-10 12:32:43] 2025-10-10 16:32:10,970 | INFO     | mean x: 1760110938.5
[2025-10-10 12:32:43] 2025-10-10 16:32:10,970 | INFO     | mean y: 2144963.2236842103
[2025-10-10 12:32:43] 2025-10-10 16:32:10,971 | INFO     | -- intersect: 47862824498.08736
[2025-10-10 12:32:43] 2025-10-10 16:32:10,971 | INFO     | intersect: 47862824498.08736
[2025-10-10 12:32:43] 2025-10-10 16:32:10,971 | INFO     | chi2: 0.027580218676055392
[2025-10-10 12:32:43] 2025-10-10 16:32:10,971 | INFO     | -- intersect: 47862824498.08736
[2025-10-10 12:32:43] 2025-10-10 16:32:10,971 | INFO     | current memory leak: -27.19 B/s (using 76 data points, chi2=0.03)
[2025-10-10 12:32:43] 2025-10-10 16:32:10,972 | INFO     | could have reported an average CPU frequency of 2740 MHz (7 samples)
[2025-10-10 12:32:43] 2025-10-10 16:32:10,972 | INFO     | ..............................
[2025-10-10 12:32:43] 2025-10-10 16:32:10,972 | INFO     | . Timing measurements:
[2025-10-10 12:32:43] 2025-10-10 16:32:10,972 | INFO     | . get job = 0 s
[2025-10-10 12:32:43] 2025-10-10 16:32:10,972 | INFO     | . initial setup = 2 s
[2025-10-10 12:32:43] 2025-10-10 16:32:10,972 | INFO     | . payload setup = 4 s
[2025-10-10 12:32:43] 2025-10-10 16:32:10,972 | INFO     | . stage-in = 0 s
[2025-10-10 12:32:43] 2025-10-10 16:32:10,973 | INFO     | . payload execution = 6493 s
[2025-10-10 12:32:43] 2025-10-10 16:32:10,973 | INFO     | . stage-out = 0 s
[2025-10-10 12:32:43] 2025-10-10 16:32:10,973 | INFO     | . log creation = 0 s
[2025-10-10 12:32:43] 2025-10-10 16:32:10,973 | INFO     | ..............................
[2025-10-10 12:32:43] 2025-10-10 16:32:11,077 | INFO     | 
[2025-10-10 12:32:43] 2025-10-10 16:32:11,077 | INFO     | job summary report
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | --------------------------------------------------
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | PanDA job id: 6837454899
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | task id: 46676269
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | errors: (none)
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | pilot state: finished 
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | transexitcode: 0
[2025-10-10 12:32:43] 2025-10-10 16:32:11,078 | INFO     | exeerrorcode: 0
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | exeerrordiag: 
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | exitcode: 0
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | exitmsg: OK
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | cpuconsumptiontime: 45062 s
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | nevents: 400
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | neventsw: 0
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | pid: 448771
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | pgrp: 448771
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | corecount: 8
[2025-10-10 12:32:43] 2025-10-10 16:32:11,079 | INFO     | event service: False
[2025-10-10 12:32:43] 2025-10-10 16:32:11,080 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 6501: 2376341, 6502: 2376340, 6503: 2385522, 6504: 2385578, 6509: 2385772}
[2025-10-10 12:32:43] 2025-10-10 16:32:11,080 | INFO     | --------------------------------------------------
[2025-10-10 12:32:43] 2025-10-10 16:32:11,080 | INFO     | 
[2025-10-10 12:32:43] 2025-10-10 16:32:11,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 12:32:43] 2025-10-10 16:32:11,098 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,098 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:32:43] 2025-10-10 16:32:11,101 | INFO     | job 6837454899 has completed (purged errors)
[2025-10-10 12:32:43] 2025-10-10 16:32:11,101 | INFO     | overall cleanup function is called
[2025-10-10 12:32:43] 2025-10-10 16:32:12,109 | INFO     | --- collectZombieJob: --- 10, [448771]
[2025-10-10 12:32:43] 2025-10-10 16:32:12,109 | INFO     | zombie collector waiting for pid 448771
[2025-10-10 12:32:43] 2025-10-10 16:32:12,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:32:43] 2025-10-10 16:32:12,110 | INFO     | collected zombie processes
[2025-10-10 12:32:43] 2025-10-10 16:32:12,110 | INFO     | will attempt to kill all subprocesses of pid=448771
[2025-10-10 12:32:43] 2025-10-10 16:32:12,375 | INFO     | process IDs to be killed: [448771] (in reverse order)
[2025-10-10 12:32:43] 2025-10-10 16:32:12,449 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:32:43] 2025-10-10 16:32:12,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:32:43] 2025-10-10 16:32:12,459 | INFO     | did not find any defunct processes belonging to 448771
[2025-10-10 12:32:43] 2025-10-10 16:32:12,468 | INFO     | did not find any defunct processes belonging to 448771
[2025-10-10 12:32:43] 2025-10-10 16:32:12,469 | INFO     | ready for new job
[2025-10-10 12:32:43] 2025-10-10 16:32:12,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:32:43] 2025-10-10 16:32:12,471 | INFO     | ***************************************
[2025-10-10 12:32:43] 2025-10-10 16:32:12,471 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:32:43] 2025-10-10 16:32:12,471 | INFO     | ***************************************
[2025-10-10 12:32:43] 2025-10-10 16:32:12,471 | INFO     | 
[2025-10-10 12:32:43] 2025-10-10 16:32:12,486 | INFO     | architecture information:
[2025-10-10 12:32:43] 2025-10-10 16:32:12,486 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:32:43] 2025-10-10 16:32:12,500 | INFO     | cat /etc/os-release:
[2025-10-10 12:32:43] NAME="CentOS Linux"
[2025-10-10 12:32:43] VERSION="7 (Core)"
[2025-10-10 12:32:43] ID="centos"
[2025-10-10 12:32:43] ID_LIKE="rhel fedora"
[2025-10-10 12:32:43] VERSION_ID="7"
[2025-10-10 12:32:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:32:43] ANSI_COLOR="0;31"
[2025-10-10 12:32:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:32:43] HOME_URL="https://www.centos.org/"
[2025-10-10 12:32:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:32:43] 
[2025-10-10 12:32:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:32:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:32:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:32:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:32:43] 
[2025-10-10 12:32:43] 2025-10-10 16:32:12,501 | INFO     | ***************************************
[2025-10-10 12:32:43] 2025-10-10 16:32:13,004 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 12:32:43] 2025-10-10 16:32:13,020 | INFO     | sufficient remaining disk space (74313629696 B)
[2025-10-10 12:32:43] 2025-10-10 16:32:13,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:32:43] 2025-10-10 16:32:13,020 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:32:43] 2025-10-10 16:32:13,021 | INFO     | update_server=False
[2025-10-10 12:32:43] 2025-10-10 16:32:13,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:32:43] 2025-10-10 16:32:13,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:32:43] 2025-10-10 16:32:13,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:32:43] 2025-10-10 16:32:13,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:32:43] 2025-10-10 16:32:13,022 | INFO     | aborting loop
[2025-10-10 12:32:43] 2025-10-10 16:32:13,872 | INFO     | all data control threads have been joined
[2025-10-10 12:32:43] 2025-10-10 16:32:14,026 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:14,027 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:14,027 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:14,109 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:14,417 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:14,472 | INFO     | all payload control threads have been joined
[2025-10-10 12:32:43] 2025-10-10 16:32:14,497 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:14,637 | INFO     | all job control threads have been joined
[2025-10-10 12:32:43] 2025-10-10 16:32:14,876 | INFO     | [job] validate thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:14,880 | INFO     | [data] control thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:15,027 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:15,100 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:15,238 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:15,387 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:15,478 | INFO     | [payload] control thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:15,642 | INFO     | [job] control thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:16,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:32:43] 2025-10-10 16:32:20,498 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:23,788 | INFO     | job.realtimelogging is not enabled
[2025-10-10 12:32:43] 2025-10-10 16:32:24,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:32:43] 2025-10-10 16:32:37,359 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:32:43] 2025-10-10 16:32:38,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037620025152)>', '<ExcThread(monitor, started 140036972459776)>']
[2025-10-10 12:32:43] 2025-10-10 16:32:43,168 | INFO     | PID=441176 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:32:43] 2025-10-10 16:32:43,168 | INFO     | .. there are 6 such processes running
[2025-10-10 12:32:43] 2025-10-10 16:32:43,170 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:32:43] 2025-10-10 16:32:43,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:32:43] 2025-10-10 16:32:43,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:32:43] 2025-10-10 16:32:43,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:32:43] 2025-10-10 16:32:43,170 | INFO     | [monitor] control thread has ended
[2025-10-10 12:32:43] 2025-10-10 16:32:43,212 | INFO     | all workflow threads have been joined
[2025-10-10 12:32:43] 2025-10-10 16:32:43,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:32:43] 2025-10-10 16:32:43,212 | INFO     | traces error code: 0
[2025-10-10 12:32:43] 2025-10-10 16:32:43,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:32:43] 2025-10-10 16:32:43,355 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:32:43] 2025-10-10 16:32:43,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:32:43] 2025-10-10 16:32:43,360 [wrapper] pilotpid: 441176
[2025-10-10 12:32:43] 2025-10-10 16:32:43,363 [wrapper] Pilot exit status: 0
[2025-10-10 12:32:43] 2025-10-10 16:32:43,372 [wrapper] pandaids: 6837454899
[2025-10-10 12:32:43] 2025-10-10 16:32:43,419 [wrapper] cleanup supervisor_pilot  739420 441177
[2025-10-10 12:32:43] 2025-10-10 16:32:43,421 [wrapper] Test setup, not cleaning
[2025-10-10 12:32:43] 2025-10-10 16:32:43,424 [wrapper] apfmon messages muted
[2025-10-10 12:32:43] 2025-10-10 16:32:43,426 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:32:43] 2025-10-10 16:32:43,428 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:32:43]  *** Error codes and diagnostics ***
[2025-10-10 12:32:43]     "exeErrorCode": 0,
[2025-10-10 12:32:43]     "exeErrorDiag": "",
[2025-10-10 12:32:43]     "pilotErrorCode": 0,
[2025-10-10 12:32:43]     "pilotErrorDiag": "",
[2025-10-10 12:32:43]  *** Listing of results directory ***
[2025-10-10 12:32:43] total 408004
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 02:32 pilot3.tar.gz
[2025-10-10 12:32:43] -rwx------. 1 boincer umatlas     36292 Oct 10 02:34 runpilot2-wrapper.sh
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 02:34 queuedata.json
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas       100 Oct 10 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:32:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 10:43 run_atlas
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas       105 Oct 10 10:43 job.xml
[2025-10-10 12:32:43] -rw-r--r--. 2 boincer umatlas 220589232 Oct 10 10:43 EVNT.46676267._001374.pool.root.1
[2025-10-10 12:32:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:43 start_atlas.sh
[2025-10-10 12:32:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 10:43 shared
[2025-10-10 12:32:43] -rw-r--r--. 2 boincer umatlas    569673 Oct 10 10:43 input.tar.gz
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas         0 Oct 10 10:43 boinc_lockfile
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 10:43 pandaJob.out
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas    975525 Oct 10 10:43 agis_schedconf.cvmfs.json
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas   1560580 Oct 10 10:43 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:32:43] drwx------. 5 boincer umatlas      4096 Oct 10 10:43 pilot3
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas      6660 Oct 10 12:29 init_data.xml
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas       529 Oct 10 12:31 boinc_task_state.xml
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas 190676874 Oct 10 12:31 HITS.46676269._033771.pool.root.1
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas      1033 Oct 10 12:32 memory_monitor_summary.json
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas    365618 Oct 10 12:32 log.46676269._033771.job.log.tgz.1
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas      7815 Oct 10 12:32 heartbeat.json
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 12:32 boinc_mmap_file
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas        27 Oct 10 12:32 wrapper_checkpoint.txt
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas        95 Oct 10 12:32 pilot_heartbeat.json
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas      4894 Oct 10 12:32 pilotlog.txt
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas    946423 Oct 10 12:32 log.46676269._033771.job.log.1
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas       357 Oct 10 12:32 output.list
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas       620 Oct 10 12:32 runtime_log
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas   1331200 Oct 10 12:32 result.tar.gz
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas      8693 Oct 10 12:32 runtime_log.err
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas       650 Oct 10 12:32 oUvNDmEtLR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0acNDmDPKoNn.diag
[2025-10-10 12:32:43] -rw-r--r--. 1 boincer umatlas     20880 Oct 10 12:32 stderr.txt
[2025-10-10 12:32:43] HITS file was successfully produced:
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas 190676874 Oct 10 12:31 shared/HITS.pool.root.1
[2025-10-10 12:32:43]  *** Contents of shared directory: ***
[2025-10-10 12:32:43] total 403512
[2025-10-10 12:32:43] -rw-r--r--. 2 boincer umatlas 220589232 Oct 10 10:43 ATLAS.root_0
[2025-10-10 12:32:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:43 start_atlas.sh
[2025-10-10 12:32:43] -rw-r--r--. 2 boincer umatlas    569673 Oct 10 10:43 input.tar.gz
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas 190676874 Oct 10 12:31 HITS.pool.root.1
[2025-10-10 12:32:43] -rw-------. 1 boincer umatlas   1331200 Oct 10 12:32 result.tar.gz
12:32:45 (437184): run_atlas exited; CPU time 45224.315279
12:32:45 (437184): called boinc_finish(0)

</stderr_txt>
]]>

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