Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:22:14 (954643): wrapper (7.7.26015): starting
12:22:14 (954643): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 12:22:14] Arguments: --nthreads 9
[2025-10-10 12:22:14] Threads: 9
[2025-10-10 12:22:14] Checking for CVMFS
[2025-10-10 12:22:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:22:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:22:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:22:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:22:15] 2.13.2.0 1602499 121162 199720 151555 1 220 25114419 40960000 24891 16776704 0 294421583 99.730 198981706 35315 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 12:22:15] CVMFS is ok
[2025-10-10 12:22:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:22:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:22:15] Further information can be found at the LHC@home message board.
[2025-10-10 12:22:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:22:15] Checking for apptainer binary...
[2025-10-10 12:22:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:22:15] Running /usr/bin/apptainer --version
[2025-10-10 12:22:15] apptainer version 1.4.3-1.el9
[2025-10-10 12:22:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:22:15] c-212-17.aglt2.org
[2025-10-10 12:22:15] apptainer works
[2025-10-10 12:22:15] Set ATHENA_PROC_NUMBER=9
[2025-10-10 12:22:15] Set ATHENA_CORE_NUMBER=9
[2025-10-10 12:22:15] Starting ATLAS job with PandaID=6837451317
[2025-10-10 12:22:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:46:30 (3022679): wrapper (7.7.26015): starting
02:46:30 (3022679): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 02:46:30] Arguments: --nthreads 9
[2025-10-12 02:46:30] Threads: 9
[2025-10-12 02:46:30] This job has been restarted, cleaning up previous attempt
[2025-10-12 02:46:30] Checking for CVMFS
[2025-10-12 02:46:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:46:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:46:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:46:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:46:32] 2.13.2.0 1602499 123467 164908 151611 1 64 37298463 40960001 22760 16776704 0 302005669 99.733 201995107 35291 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 02:46:32] CVMFS is ok
[2025-10-12 02:46:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:46:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:46:32] Further information can be found at the LHC@home message board.
[2025-10-12 02:46:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:46:32] Checking for apptainer binary...
[2025-10-12 02:46:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:46:32] Running /usr/bin/apptainer --version
[2025-10-12 02:46:32] apptainer version 1.4.3-1.el9
[2025-10-12 02:46:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:46:32] c-212-17.aglt2.org
[2025-10-12 02:46:32] apptainer works
[2025-10-12 02:46:32] Set ATHENA_PROC_NUMBER=9
[2025-10-12 02:46:32] Set ATHENA_CORE_NUMBER=9
[2025-10-12 02:46:32] Starting ATLAS job with PandaID=6837451317
[2025-10-12 02:46:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:02:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:02:31] 2025-10-12 11:01:31,333 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:02:31] 2025-10-12 11:01:31,333 | INFO     | sum of square deviations: 4844918158.383978
[2025-10-12 07:02:31] 2025-10-12 11:01:31,334 | INFO     | sum of deviations: 78678997764.52007
[2025-10-12 07:02:31] 2025-10-12 11:01:31,334 | INFO     | mean x: 1760259263.592
[2025-10-12 07:02:31] 2025-10-12 11:01:31,335 | INFO     | mean y: 2487973.76
[2025-10-12 07:02:31] 2025-10-12 11:01:31,335 | INFO     | -- intersect: -28583223928.40469
[2025-10-12 07:02:31] 2025-10-12 11:01:31,335 | INFO     | intersect: -28583223928.40469
[2025-10-12 07:02:31] 2025-10-12 11:01:31,335 | INFO     | chi2: 2.5696591265299817
[2025-10-12 07:02:31] 2025-10-12 11:01:31,335 | INFO     | sum of square deviations: 4559998900.840798
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | sum of deviations: 93080112182.26115
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | mean x: 1760259111.0938776
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | mean y: 2495540.6408163267
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | -- intersect: -35928459508.54894
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | intersect: -35928459508.54894
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | chi2: 1.8405691508321114
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | current chi2=1.8405691508321114 (change=28.373023027471326 %)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,337 | INFO     | sum of square deviations: 4286475205.79583
[2025-10-12 07:02:31] 2025-10-12 11:01:31,339 | INFO     | sum of deviations: 90962610838.25836
[2025-10-12 07:02:31] 2025-10-12 11:01:31,339 | INFO     | mean x: 1760258958.5958333
[2025-10-12 07:02:31] 2025-10-12 11:01:31,339 | INFO     | mean y: 2494359.8583333334
[2025-10-12 07:02:31] 2025-10-12 11:01:31,339 | INFO     | -- intersect: -37351681959.37297
[2025-10-12 07:02:31] 2025-10-12 11:01:31,339 | INFO     | intersect: -37351681959.37297
[2025-10-12 07:02:31] 2025-10-12 11:01:31,339 | INFO     | chi2: 1.8376809358192223
[2025-10-12 07:02:31] 2025-10-12 11:01:31,340 | INFO     | current chi2=1.8376809358192223 (change=0.15691966865701862 %)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,340 | INFO     | right removable region: 239
[2025-10-12 07:02:31] 2025-10-12 11:01:31,340 | INFO     | sum of square deviations: 4559984870.840798
[2025-10-12 07:02:31] 2025-10-12 11:01:31,341 | INFO     | sum of deviations: 32493770772.828594
[2025-10-12 07:02:31] 2025-10-12 11:01:31,341 | INFO     | mean x: 1760259416.0938776
[2025-10-12 07:02:31] 2025-10-12 11:01:31,341 | INFO     | mean y: 2512529.4857142856
[2025-10-12 07:02:31] 2025-10-12 11:01:31,341 | INFO     | -- intersect: -12540833026.992228
[2025-10-12 07:02:31] 2025-10-12 11:01:31,341 | INFO     | intersect: -12540833026.992228
[2025-10-12 07:02:31] 2025-10-12 11:01:31,342 | INFO     | chi2: 0.9252840089386736
[2025-10-12 07:02:31] 2025-10-12 11:01:31,342 | INFO     | current chi2=0.9252840089386736 (change=63.99195522138537 %)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,342 | INFO     | sum of square deviations: 4286447145.79583
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | sum of deviations: 21840314282.775013
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | mean x: 1760259568.5958333
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | mean y: 2518469.575
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | -- intersect: -8966359692.168262
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | intersect: -8966359692.168262
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | chi2: 0.880956484082137
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | current chi2=0.880956484082137 (change=4.790693930545873 %)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | left removable region: 20
[2025-10-12 07:02:31] 2025-10-12 11:01:31,344 | INFO     | sum of square deviations: 3256852970.1735144
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | sum of deviations: 14985923256.214613
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | mean x: 1760259538.091324
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | mean y: 2539890.6392694064
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | -- intersect: -8097031870.947184
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | intersect: -8097031870.947184
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | chi2: 0.03294112706821846
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | -- intersect: -8097031870.947184
[2025-10-12 07:02:31] 2025-10-12 11:01:31,346 | INFO     | current memory leak: 4.60 B/s (using 219 data points, chi2=0.03)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | could have reported an average CPU frequency of 3119 MHz (12 samples)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | ..............................
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . Timing measurements:
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . get job = 0 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . initial setup = 2 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . payload setup = 14 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . stage-in = 0 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . payload execution = 15218 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . stage-out = 3 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | . log creation = 0 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,347 | INFO     | ..............................
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | 
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | job summary report
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | --------------------------------------------------
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | PanDA job id: 6837451317
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | task id: 46676269
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | errors: (none)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | pilot state: finished 
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | transexitcode: 0
[2025-10-12 07:02:31] 2025-10-12 11:01:31,475 | INFO     | exeerrorcode: 0
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | exeerrordiag: 
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | exitcode: 0
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | exitmsg: OK
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | cpuconsumptiontime: 36680 s
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | nevents: 400
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | neventsw: 0
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | pid: 3057561
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | pgrp: 3057561
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | corecount: 9
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | event service: False
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2349175, 15238: 2380363, 15242: 2389417, 15253: 2389555}
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | --------------------------------------------------
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | 
[2025-10-12 07:02:31] 2025-10-12 11:01:31,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 07:02:31] 2025-10-12 11:01:31,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | job 6837451317 has completed (purged errors)
[2025-10-12 07:02:31] 2025-10-12 11:01:31,667 | INFO     | overall cleanup function is called
[2025-10-12 07:02:31] 2025-10-12 11:01:32,580 | INFO     | PID=3037213 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 07:02:31] 2025-10-12 11:01:32,580 | INFO     | .. there are 24 such processes running
[2025-10-12 07:02:31] 2025-10-12 11:01:32,761 | INFO     | --- collectZombieJob: --- 10, [3057561]
[2025-10-12 07:02:31] 2025-10-12 11:01:32,762 | INFO     | zombie collector waiting for pid 3057561
[2025-10-12 07:02:31] 2025-10-12 11:01:32,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:02:31] 2025-10-12 11:01:32,762 | INFO     | collected zombie processes
[2025-10-12 07:02:31] 2025-10-12 11:01:32,762 | INFO     | will attempt to kill all subprocesses of pid=3057561
[2025-10-12 07:02:31] 2025-10-12 11:01:33,169 | INFO     | process IDs to be killed: [3057561] (in reverse order)
[2025-10-12 07:02:31] 2025-10-12 11:01:33,308 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:02:31] 2025-10-12 11:01:33,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:02:31] 2025-10-12 11:01:33,329 | INFO     | did not find any defunct processes belonging to 3057561
[2025-10-12 07:02:31] 2025-10-12 11:01:33,350 | INFO     | did not find any defunct processes belonging to 3057561
[2025-10-12 07:02:31] 2025-10-12 11:01:33,351 | INFO     | ready for new job
[2025-10-12 07:02:31] 2025-10-12 11:01:33,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:02:31] 2025-10-12 11:01:33,353 | INFO     | ***************************************
[2025-10-12 07:02:31] 2025-10-12 11:01:33,354 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:02:31] 2025-10-12 11:01:33,354 | INFO     | ***************************************
[2025-10-12 07:02:31] 2025-10-12 11:01:33,354 | INFO     | 
[2025-10-12 07:02:31] 2025-10-12 11:01:33,394 | INFO     | architecture information:
[2025-10-12 07:02:31] 2025-10-12 11:01:33,398 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:02:31] 2025-10-12 11:01:33,464 | INFO     | cat /etc/os-release:
[2025-10-12 07:02:31] NAME="CentOS Linux"
[2025-10-12 07:02:31] VERSION="7 (Core)"
[2025-10-12 07:02:31] ID="centos"
[2025-10-12 07:02:31] ID_LIKE="rhel fedora"
[2025-10-12 07:02:31] VERSION_ID="7"
[2025-10-12 07:02:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:02:31] ANSI_COLOR="0;31"
[2025-10-12 07:02:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:02:31] HOME_URL="https://www.centos.org/"
[2025-10-12 07:02:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:02:31] 
[2025-10-12 07:02:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:02:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:02:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:02:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:02:31] 
[2025-10-12 07:02:31] 2025-10-12 11:01:33,465 | INFO     | ***************************************
[2025-10-12 07:02:31] 2025-10-12 11:01:33,967 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 07:02:31] 2025-10-12 11:01:34,075 | INFO     | sufficient remaining disk space (127274057728 B)
[2025-10-12 07:02:31] 2025-10-12 11:01:34,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:02:31] 2025-10-12 11:01:34,076 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:02:31] 2025-10-12 11:01:34,076 | INFO     | update_server=False
[2025-10-12 07:02:31] 2025-10-12 11:01:34,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:02:31] 2025-10-12 11:01:34,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:02:31] 2025-10-12 11:01:34,093 | INFO     | aborting loop
[2025-10-12 07:02:31] 2025-10-12 11:01:34,344 | INFO     | all data control threads have been joined
[2025-10-12 07:02:31] 2025-10-12 11:01:34,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:02:31] 2025-10-12 11:01:34,853 | INFO     | all payload control threads have been joined
[2025-10-12 07:02:31] 2025-10-12 11:01:35,090 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:35,106 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:35,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:02:31] 2025-10-12 11:01:35,305 | INFO     | all job control threads have been joined
[2025-10-12 07:02:31] 2025-10-12 11:01:35,356 | INFO     | [data] control thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:35,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:35,859 | INFO     | [payload] control thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:35,893 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,115 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,149 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,198 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,198 | INFO     | [job] validate thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,198 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,312 | INFO     | [job] control thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,342 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:36,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:02:31] 2025-10-12 11:01:37,202 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:37,451 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:38,741 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:02:31] 2025-10-12 11:01:55,763 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-10-12 07:02:31] 2025-10-12 11:02:05,311 | INFO     | PID=3037213 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:02:31] 2025-10-12 11:02:05,313 | INFO     | .. there are 24 such processes running
[2025-10-12 07:02:31] 2025-10-12 11:02:05,313 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:02:31] 2025-10-12 11:02:05,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:02:31] 2025-10-12 11:02:05,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:02:31] 2025-10-12 11:02:24,061 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:02:31] 2025-10-12 11:02:24,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572443395904)>', '<ExcThread(monitor, started 140571553277696)>']
[2025-10-12 07:02:31] 2025-10-12 11:02:25,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:02:31] 2025-10-12 11:02:25,439 | INFO     | [monitor] control thread has ended
[2025-10-12 07:02:31] 2025-10-12 11:02:29,999 | INFO     | all workflow threads have been joined
[2025-10-12 07:02:31] 2025-10-12 11:02:29,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:02:31] 2025-10-12 11:02:29,999 | INFO     | traces error code: 0
[2025-10-12 07:02:31] 2025-10-12 11:02:29,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:02:31] 2025-10-12 11:02:30,743 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:02:31] 2025-10-12 11:02:30,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:02:31] 2025-10-12 11:02:30,750 [wrapper] pilotpid: 3037213
[2025-10-12 07:02:31] 2025-10-12 11:02:30,754 [wrapper] Pilot exit status: 0
[2025-10-12 07:02:31] 2025-10-12 11:02:30,821 [wrapper] pandaids: 6837451317
[2025-10-12 07:02:31] 2025-10-12 11:02:31,044 [wrapper] cleanup supervisor_pilot 3763996 3037214
[2025-10-12 07:02:31] 2025-10-12 11:02:31,056 [wrapper] Test setup, not cleaning
[2025-10-12 07:02:31] 2025-10-12 11:02:31,061 [wrapper] apfmon messages muted
[2025-10-12 07:02:31] 2025-10-12 11:02:31,064 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:02:31] 2025-10-12 11:02:31,070 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:02:31]  *** Error codes and diagnostics ***
[2025-10-12 07:02:31]     "exeErrorCode": 0,
[2025-10-12 07:02:31]     "exeErrorDiag": "",
[2025-10-12 07:02:31]     "pilotErrorCode": 0,
[2025-10-12 07:02:31]     "pilotErrorDiag": "",
[2025-10-12 07:02:31]  *** Listing of results directory ***
[2025-10-12 07:02:31] total 627980
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 01:42 pilot3.tar.gz
[2025-10-12 07:02:31] -rwx------. 1 boincer umatlas     36292 Oct 10 01:55 runpilot2-wrapper.sh
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 01:55 queuedata.json
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas       100 Oct 10 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:02:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 12:22 run_atlas
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas       105 Oct 10 12:22 job.xml
[2025-10-12 07:02:31] -rw-r--r--. 3 boincer umatlas 220413476 Oct 10 12:22 EVNT.46676267._001360.pool.root.1
[2025-10-12 07:02:31] -rw-r--r--. 3 boincer umatlas 220413476 Oct 10 12:22 ATLAS.root_0
[2025-10-12 07:02:31] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 12:22 input.tar.gz
[2025-10-12 07:02:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:22 start_atlas.sh
[2025-10-12 07:02:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 12:22 shared
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas         0 Oct 10 12:22 boinc_lockfile
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 02:46 pandaJob.out
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas    975528 Oct 12 02:46 agis_schedconf.cvmfs.json
[2025-10-12 07:02:31] drwx------. 5 boincer umatlas      4096 Oct 12 02:46 pilot3
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas 193280145 Oct 12 07:00 HITS.46676269._033414.pool.root.1
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas       531 Oct 12 07:00 boinc_task_state.xml
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas      1063 Oct 12 07:01 memory_monitor_summary.json
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas    493460 Oct 12 07:01 log.46676269._033414.job.log.tgz.1
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas        95 Oct 12 07:01 pilot_heartbeat.json
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas      6950 Oct 12 07:01 init_data.xml
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas      7803 Oct 12 07:01 heartbeat.json
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas        29 Oct 12 07:02 wrapper_checkpoint.txt
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:02 boinc_mmap_file
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas      4825 Oct 12 07:02 pilotlog.txt
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas   2031185 Oct 12 07:02 log.46676269._033414.job.log.1
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas       357 Oct 12 07:02 output.list
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:02 runtime_log
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas   2539520 Oct 12 07:02 result.tar.gz
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas      8789 Oct 12 07:02 runtime_log.err
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas       785 Oct 12 07:02 B32LDm2GLR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDQPMDmMgXZUo.diag
[2025-10-12 07:02:31] -rw-r--r--. 1 boincer umatlas     23222 Oct 12 07:02 stderr.txt
[2025-10-12 07:02:31] HITS file was successfully produced:
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas 193280145 Oct 12 07:00 shared/HITS.pool.root.1
[2025-10-12 07:02:31]  *** Contents of shared directory: ***
[2025-10-12 07:02:31] total 407060
[2025-10-12 07:02:31] -rw-r--r--. 3 boincer umatlas 220413476 Oct 10 12:22 ATLAS.root_0
[2025-10-12 07:02:31] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 12:22 input.tar.gz
[2025-10-12 07:02:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:22 start_atlas.sh
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas 193280145 Oct 12 07:00 HITS.pool.root.1
[2025-10-12 07:02:31] -rw-------. 1 boincer umatlas   2539520 Oct 12 07:02 result.tar.gz
07:02:32 (3022679): run_atlas exited; CPU time 37147.384703
07:02:32 (3022679): called boinc_finish(0)

</stderr_txt>
]]>

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