Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:44:06 (599561): wrapper (7.7.26015): starting
10:44:06 (599561): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 10:44:06] Arguments: --nthreads 8
[2025-10-10 10:44:06] Threads: 8
[2025-10-10 10:44:06] Checking for CVMFS
[2025-10-10 10:44:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:44:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:44:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:44:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:44:08] 2.13.2.0 8406 33761 114376 151548 2 459 29706828 40960000 26462 16776704 0 213796418 99.845 80752732 49370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 10:44:08] CVMFS is ok
[2025-10-10 10:44:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:44:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:44:08] Further information can be found at the LHC@home message board.
[2025-10-10 10:44:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:44:08] Checking for apptainer binary...
[2025-10-10 10:44:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:44:08] Running /usr/bin/apptainer --version
[2025-10-10 10:44:08] apptainer version 1.4.3-1.el9
[2025-10-10 10:44:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:44:08] c-208-37.aglt2.org
[2025-10-10 10:44:08] apptainer works
[2025-10-10 10:44:08] Set ATHENA_PROC_NUMBER=8
[2025-10-10 10:44:08] Set ATHENA_CORE_NUMBER=8
[2025-10-10 10:44:09] Starting ATLAS job with PandaID=6837451516
[2025-10-10 10:44:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:37:32]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:37:32] 2025-10-10 16:36:30,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:37:32] 2025-10-10 16:36:30,890 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 12:37:32] 2025-10-10 16:36:30,931 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3721.4659453124996
[2025-10-10 12:37:32] 2025-10-10 16:36:30,991 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6837451516/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:37:32] 2025-10-10 16:36:30,992 | INFO     | extracted standard info from prmon json
[2025-10-10 12:37:32] 2025-10-10 16:36:30,992 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:37:32] 2025-10-10 16:36:30,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:37:32] 2025-10-10 16:36:30,992 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:37:32] 2025-10-10 16:36:30,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:37:32] 2025-10-10 16:36:30,997 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:37:32] 2025-10-10 16:36:30,997 | INFO     | sum of square deviations: 390612411.8796308
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | sum of deviations: 18537787216.388893
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | mean x: 1760110862.601852
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | mean y: 2415090.0555555555
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | -- intersect: -83529392030.8674
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | intersect: -83529392030.8674
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | chi2: 4.718577513275568
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | sum of square deviations: 338831707.0291265
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | sum of deviations: 24873362468.5631
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | mean x: 1760110710.0970874
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | mean y: 2432953.5436893203
[2025-10-10 12:37:32] 2025-10-10 16:36:30,998 | INFO     | -- intersect: -129205875386.03401
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | intersect: -129205875386.03401
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | chi2: 3.989170938091525
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | current chi2=3.989170938091525 (change=15.458187835886566 %)
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | right removable region: 102
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | sum of square deviations: 338831341.825242
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | sum of deviations: -13588338943.029129
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | mean x: 1760111015.106796
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | mean y: 2509301.1844660193
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | -- intersect: 70589205684.6784
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | intersect: 70589205684.6784
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | chi2: 0.931486141419686
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | current chi2=0.931486141419686 (change=80.2591747449527 %)
[2025-10-10 12:37:32] 2025-10-10 16:36:30,999 | INFO     | sum of square deviations: 291841059.26530594
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | sum of deviations: -14975919754.510202
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | mean x: 1760111167.6122448
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | mean y: 2513523.5918367347
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | -- intersect: 90323195855.05098
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | intersect: 90323195855.05098
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | chi2: 0.8729818682082159
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | current chi2=0.8729818682082159 (change=6.280745424972533 %)
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | left removable region: 20
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | sum of square deviations: 170960225.28048798
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | sum of deviations: -4543888252.646343
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | mean x: 1760111289.621951
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | mean y: 2525577.9146341463
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | -- intersect: 46783869011.112526
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | intersect: 46783869011.112526
[2025-10-10 12:37:32] 2025-10-10 16:36:31,000 | INFO     | chi2: 0.0304013020755467
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | -- intersect: 46783869011.112526
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | current memory leak: -26.58 B/s (using 82 data points, chi2=0.03)
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | could have reported an average CPU frequency of 3712 MHz (7 samples)
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | ..............................
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | . Timing measurements:
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | . get job = 0 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | . initial setup = 4 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,001 | INFO     | . payload setup = 13 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,005 | INFO     | . stage-in = 0 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,005 | INFO     | . payload execution = 6585 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,005 | INFO     | . stage-out = 2 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,005 | INFO     | . log creation = 0 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,005 | INFO     | ..............................
[2025-10-10 12:37:32] 2025-10-10 16:36:31,258 | INFO     | 
[2025-10-10 12:37:32] 2025-10-10 16:36:31,258 | INFO     | job summary report
[2025-10-10 12:37:32] 2025-10-10 16:36:31,258 | INFO     | --------------------------------------------------
[2025-10-10 12:37:32] 2025-10-10 16:36:31,258 | INFO     | PanDA job id: 6837451516
[2025-10-10 12:37:32] 2025-10-10 16:36:31,258 | INFO     | task id: 46676269
[2025-10-10 12:37:32] 2025-10-10 16:36:31,258 | INFO     | errors: (none)
[2025-10-10 12:37:32] 2025-10-10 16:36:31,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | pilot state: finished 
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | transexitcode: 0
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | exeerrorcode: 0
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | exeerrordiag: 
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | exitcode: 0
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | exitmsg: OK
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | cpuconsumptiontime: 23939 s
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | nevents: 400
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | neventsw: 0
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | pid: 620688
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | pgrp: 620688
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | corecount: 8
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | event service: False
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | sizes: {0: 2348856, 1: 2348884, 11: 2348884, 22: 2349202, 6603: 2376412, 6606: 2385410, 6607: 2385594, 6639: 2385788}
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | --------------------------------------------------
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | 
[2025-10-10 12:37:32] 2025-10-10 16:36:31,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-10 12:37:32] 2025-10-10 16:36:31,284 | INFO     | PID=607597 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:37:32] 2025-10-10 16:36:31,284 | INFO     | .. there are 23 such processes running
[2025-10-10 12:37:32] 2025-10-10 16:36:31,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | job 6837451516 has completed (purged errors)
[2025-10-10 12:37:32] 2025-10-10 16:36:31,419 | INFO     | overall cleanup function is called
[2025-10-10 12:37:32] 2025-10-10 16:36:32,439 | INFO     | --- collectZombieJob: --- 10, [620688]
[2025-10-10 12:37:32] 2025-10-10 16:36:32,439 | INFO     | zombie collector waiting for pid 620688
[2025-10-10 12:37:32] 2025-10-10 16:36:32,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:37:32] 2025-10-10 16:36:32,439 | INFO     | collected zombie processes
[2025-10-10 12:37:32] 2025-10-10 16:36:32,440 | INFO     | will attempt to kill all subprocesses of pid=620688
[2025-10-10 12:37:32] 2025-10-10 16:36:33,583 | INFO     | process IDs to be killed: [620688] (in reverse order)
[2025-10-10 12:37:32] 2025-10-10 16:36:34,150 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:37:32] 2025-10-10 16:36:34,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:37:32] 2025-10-10 16:36:34,196 | INFO     | did not find any defunct processes belonging to 620688
[2025-10-10 12:37:32] 2025-10-10 16:36:34,231 | INFO     | did not find any defunct processes belonging to 620688
[2025-10-10 12:37:32] 2025-10-10 16:36:34,231 | INFO     | ready for new job
[2025-10-10 12:37:32] 2025-10-10 16:36:34,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:37:32] 2025-10-10 16:36:34,233 | INFO     | ***************************************
[2025-10-10 12:37:32] 2025-10-10 16:36:34,233 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:37:32] 2025-10-10 16:36:34,233 | INFO     | ***************************************
[2025-10-10 12:37:32] 2025-10-10 16:36:34,233 | INFO     | 
[2025-10-10 12:37:32] 2025-10-10 16:36:34,246 | INFO     | architecture information:
[2025-10-10 12:37:32] 2025-10-10 16:36:34,249 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:37:32] 2025-10-10 16:36:34,335 | INFO     | cat /etc/os-release:
[2025-10-10 12:37:32] NAME="CentOS Linux"
[2025-10-10 12:37:32] VERSION="7 (Core)"
[2025-10-10 12:37:32] ID="centos"
[2025-10-10 12:37:32] ID_LIKE="rhel fedora"
[2025-10-10 12:37:32] VERSION_ID="7"
[2025-10-10 12:37:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:37:32] ANSI_COLOR="0;31"
[2025-10-10 12:37:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:37:32] HOME_URL="https://www.centos.org/"
[2025-10-10 12:37:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:37:32] 
[2025-10-10 12:37:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:37:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:37:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:37:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:37:32] 
[2025-10-10 12:37:32] 2025-10-10 16:36:34,336 | INFO     | ***************************************
[2025-10-10 12:37:32] 2025-10-10 16:36:34,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-10 12:37:32] 2025-10-10 16:36:34,901 | INFO     | sufficient remaining disk space (170318102528 B)
[2025-10-10 12:37:32] 2025-10-10 16:36:34,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:37:32] 2025-10-10 16:36:34,901 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:37:32] 2025-10-10 16:36:34,901 | INFO     | update_server=False
[2025-10-10 12:37:32] 2025-10-10 16:36:34,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:37:32] 2025-10-10 16:36:34,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:37:32] 2025-10-10 16:36:34,903 | INFO     | aborting loop
[2025-10-10 12:37:32] 2025-10-10 16:36:35,015 | INFO     | all job control threads have been joined
[2025-10-10 12:37:32] 2025-10-10 16:36:35,109 | INFO     | all payload control threads have been joined
[2025-10-10 12:37:32] 2025-10-10 16:36:35,317 | INFO     | all data control threads have been joined
[2025-10-10 12:37:32] 2025-10-10 16:36:35,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:37:32] 2025-10-10 16:36:35,908 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:35,909 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:35,989 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,021 | INFO     | [job] control thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,077 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,115 | INFO     | [payload] control thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,172 | INFO     | [job] validate thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:37:32] 2025-10-10 16:36:36,323 | INFO     | [data] control thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,411 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,524 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,525 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,604 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,965 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:36,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:37:32] 2025-10-10 16:36:37,301 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:37,836 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:36:41,011 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:37:32] 2025-10-10 16:37:04,147 | INFO     | PID=607597 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:37:32] 2025-10-10 16:37:04,147 | INFO     | .. there are 23 such processes running
[2025-10-10 12:37:32] 2025-10-10 16:37:04,147 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:37:32] 2025-10-10 16:37:04,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:37:32] 2025-10-10 16:37:04,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:37:32] 2025-10-10 16:37:23,196 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:37:32] 2025-10-10 16:37:25,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925642794816)>', '<ExcThread(monitor, started 139924917442304)>']
[2025-10-10 12:37:32] 2025-10-10 16:37:25,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:37:32] 2025-10-10 16:37:25,307 | INFO     | [monitor] control thread has ended
[2025-10-10 12:37:32] 2025-10-10 16:37:30,315 | INFO     | all workflow threads have been joined
[2025-10-10 12:37:32] 2025-10-10 16:37:30,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:37:32] 2025-10-10 16:37:30,316 | INFO     | traces error code: 0
[2025-10-10 12:37:32] 2025-10-10 16:37:30,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:37:32] 2025-10-10 16:37:31,465 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:37:32] 2025-10-10 16:37:31,495 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:37:32] 2025-10-10 16:37:31,523 [wrapper] pilotpid: 607597
[2025-10-10 12:37:32] 2025-10-10 16:37:31,543 [wrapper] Pilot exit status: 0
[2025-10-10 12:37:32] 2025-10-10 16:37:31,653 [wrapper] pandaids: 6837451516
[2025-10-10 12:37:32] 2025-10-10 16:37:31,831 [wrapper] cleanup supervisor_pilot  999758 607598
[2025-10-10 12:37:32] 2025-10-10 16:37:31,852 [wrapper] Test setup, not cleaning
[2025-10-10 12:37:32] 2025-10-10 16:37:31,863 [wrapper] apfmon messages muted
[2025-10-10 12:37:32] 2025-10-10 16:37:31,931 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:37:32] 2025-10-10 16:37:31,954 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:37:32]  *** Error codes and diagnostics ***
[2025-10-10 12:37:32]     "exeErrorCode": 0,
[2025-10-10 12:37:32]     "exeErrorDiag": "",
[2025-10-10 12:37:32]     "pilotErrorCode": 0,
[2025-10-10 12:37:32]     "pilotErrorDiag": "",
[2025-10-10 12:37:32]  *** Listing of results directory ***
[2025-10-10 12:37:32] total 406604
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 02:01 pilot3.tar.gz
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 02:19 queuedata.json
[2025-10-10 12:37:32] -rwx------. 1 boincer umatlas     36292 Oct 10 02:20 runpilot2-wrapper.sh
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas       100 Oct 10 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:37:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 10:44 run_atlas
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas       105 Oct 10 10:44 job.xml
[2025-10-10 12:37:32] -rw-r--r--. 2 boincer umatlas 218786628 Oct 10 10:44 EVNT.46676267._001368.pool.root.1
[2025-10-10 12:37:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:44 start_atlas.sh
[2025-10-10 12:37:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 10:44 shared
[2025-10-10 12:37:32] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 10:44 input.tar.gz
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas         0 Oct 10 10:44 boinc_lockfile
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 10:44 pandaJob.out
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas    975525 Oct 10 10:45 agis_schedconf.cvmfs.json
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas   1560580 Oct 10 10:45 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:37:32] drwx------. 5 boincer umatlas      4096 Oct 10 10:45 pilot3
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas 191171802 Oct 10 12:35 HITS.46676269._033613.pool.root.1
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas       529 Oct 10 12:35 boinc_task_state.xml
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas      1045 Oct 10 12:35 memory_monitor_summary.json
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas    352704 Oct 10 12:35 log.46676269._033613.job.log.tgz.1
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas        95 Oct 10 12:36 pilot_heartbeat.json
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas      7800 Oct 10 12:36 heartbeat.json
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas      7173 Oct 10 12:36 init_data.xml
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas        27 Oct 10 12:37 wrapper_checkpoint.txt
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 12:37 boinc_mmap_file
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas      4824 Oct 10 12:37 pilotlog.txt
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas    894708 Oct 10 12:37 log.46676269._033613.job.log.1
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas       357 Oct 10 12:37 output.list
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas       620 Oct 10 12:37 runtime_log
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas   1269760 Oct 10 12:37 result.tar.gz
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas      8703 Oct 10 12:37 runtime_log.err
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas       656 Oct 10 12:37 9QQLDm3fLR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBZcNDmavzVYo.diag
[2025-10-10 12:37:32] -rw-r--r--. 1 boincer umatlas     21265 Oct 10 12:37 stderr.txt
[2025-10-10 12:37:32] HITS file was successfully produced:
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas 191171802 Oct 10 12:35 shared/HITS.pool.root.1
[2025-10-10 12:37:32]  *** Contents of shared directory: ***
[2025-10-10 12:37:32] total 402176
[2025-10-10 12:37:32] -rw-r--r--. 2 boincer umatlas 218786628 Oct 10 10:44 ATLAS.root_0
[2025-10-10 12:37:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:44 start_atlas.sh
[2025-10-10 12:37:32] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 10:44 input.tar.gz
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas 191171802 Oct 10 12:35 HITS.pool.root.1
[2025-10-10 12:37:32] -rw-------. 1 boincer umatlas   1269760 Oct 10 12:37 result.tar.gz
12:37:34 (599561): run_atlas exited; CPU time 24092.664010
12:37:34 (599561): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN