Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:48:29 (1744958): wrapper (7.7.26015): starting
15:48:29 (1744958): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 15:48:29] Arguments: --nthreads 4
[2025-10-11 15:48:29] Threads: 4
[2025-10-11 15:48:29] Checking for CVMFS
[2025-10-11 15:48:29] No cvmfs_config command found, will try listing directly
[2025-10-11 15:48:29] CVMFS is ok
[2025-10-11 15:48:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:48:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:48:29] Further information can be found at the LHC@home message board.
[2025-10-11 15:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:48:29] Checking for apptainer binary...
[2025-10-11 15:48:29] which: no apptainer in ((null))
[2025-10-11 15:48:29] apptainer is not installed, using version from CVMFS
[2025-10-11 15:48:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:48:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-10-11 15:48:29] apptainer works
[2025-10-11 15:48:29] Set ATHENA_PROC_NUMBER=4
[2025-10-11 15:48:29] Set ATHENA_CORE_NUMBER=4
[2025-10-11 15:48:29] Starting ATLAS job with PandaID=6837555363
[2025-10-11 15:48:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:20:41]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:20:41] 2025-10-11 17:19:19,810 | INFO     | sum of square deviations: 2555770710.5
[2025-10-11 19:20:41] 2025-10-11 17:19:19,811 | INFO     | sum of deviations: -284526143.00000006
[2025-10-11 19:20:41] 2025-10-11 17:19:19,811 | INFO     | mean x: 1760196979.5
[2025-10-11 19:20:41] 2025-10-11 17:19:19,812 | INFO     | mean y: 2345824.5643564356
[2025-10-11 19:20:41] 2025-10-11 17:19:19,812 | INFO     | -- intersect: 198303175.2921948
[2025-10-11 19:20:41] 2025-10-11 17:19:19,812 | INFO     | intersect: 198303175.2921948
[2025-10-11 19:20:41] 2025-10-11 17:19:19,812 | INFO     | chi2: 0.02047726122701646
[2025-10-11 19:20:41] 2025-10-11 17:19:19,812 | INFO     | current chi2=0.02047726122701646 (change=98.51061692477086 %)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,813 | INFO     | sum of square deviations: 2370641658.0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,814 | INFO     | sum of deviations: 2044972905.9999995
[2025-10-11 19:20:41] 2025-10-11 17:19:19,814 | INFO     | mean x: 1760197132.0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,815 | INFO     | time since job start (12640s) is within the limit (172800.0s)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,815 | INFO     | mean y: 2343901.4822335024
[2025-10-11 19:20:41] 2025-10-11 17:19:19,816 | INFO     | -- intersect: -1516044772.745183
[2025-10-11 19:20:41] 2025-10-11 17:19:19,816 | INFO     | intersect: -1516044772.745183
[2025-10-11 19:20:41] 2025-10-11 17:19:19,816 | INFO     | chi2: 0.01478773828608423
[2025-10-11 19:20:41] 2025-10-11 17:19:19,816 | INFO     | current chi2=0.01478773828608423 (change=27.78458934452533 %)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,817 | INFO     | sum of square deviations: 2194675568.0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,818 | INFO     | sum of deviations: 5004511186.999999
[2025-10-11 19:20:41] 2025-10-11 17:19:19,818 | INFO     | mean x: 1760197284.5
[2025-10-11 19:20:41] 2025-10-11 17:19:19,818 | INFO     | mean y: 2341334.6770833335
[2025-10-11 19:20:41] 2025-10-11 17:19:19,818 | INFO     | -- intersect: -4011430509.347595
[2025-10-11 19:20:41] 2025-10-11 17:19:19,819 | INFO     | intersect: -4011430509.347595
[2025-10-11 19:20:41] 2025-10-11 17:19:19,819 | INFO     | chi2: 0.003927016572714218
[2025-10-11 19:20:41] 2025-10-11 17:19:19,819 | INFO     | current chi2=0.003927016572714218 (change=73.44410283207625 %)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,820 | INFO     | sum of square deviations: 2027639878.0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,821 | INFO     | sum of deviations: 4898111692.999996
[2025-10-11 19:20:41] 2025-10-11 17:19:19,821 | INFO     | mean x: 1760197437.0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,821 | INFO     | mean y: 2341446.1764705884
[2025-10-11 19:20:41] 2025-10-11 17:19:19,821 | INFO     | -- intersect: -4249717186.9682083
[2025-10-11 19:20:41] 2025-10-11 17:19:19,821 | INFO     | intersect: -4249717186.9682083
[2025-10-11 19:20:41] 2025-10-11 17:19:19,822 | INFO     | chi2: 0.001088449579094582
[2025-10-11 19:20:41] 2025-10-11 17:19:19,822 | INFO     | current chi2=0.001088449579094582 (change=72.28304085454155 %)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,822 | INFO     | sum of square deviations: 1869302025.5
[2025-10-11 19:20:41] 2025-10-11 17:19:19,824 | INFO     | sum of deviations: 4290920316.0000005
[2025-10-11 19:20:41] 2025-10-11 17:19:19,824 | INFO     | mean x: 1760197589.5
[2025-10-11 19:20:41] 2025-10-11 17:19:19,824 | INFO     | mean y: 2342031.263736264
[2025-10-11 19:20:41] 2025-10-11 17:19:19,824 | INFO     | -- intersect: -4038132698.8374853
[2025-10-11 19:20:41] 2025-10-11 17:19:19,824 | INFO     | intersect: -4038132698.8374853
[2025-10-11 19:20:41] 2025-10-11 17:19:19,825 | INFO     | chi2: 0.0010192421780535238
[2025-10-11 19:20:41] 2025-10-11 17:19:19,825 | INFO     | current chi2=0.0010192421780535238 (change=6.358346989175906 %)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,825 | INFO     | left removable region: 50
[2025-10-11 19:20:41] 2025-10-11 17:19:19,825 | INFO     | sum of square deviations: 1067554900.0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,826 | INFO     | sum of deviations: 2902151799.000001
[2025-10-11 19:20:41] 2025-10-11 17:19:19,826 | INFO     | mean x: 1760198169.0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,826 | INFO     | mean y: 2342992.178807947
[2025-10-11 19:20:41] 2025-10-11 17:19:19,827 | INFO     | -- intersect: -4782762001.259804
[2025-10-11 19:20:41] 2025-10-11 17:19:19,827 | INFO     | intersect: -4782762001.259804
[2025-10-11 19:20:41] 2025-10-11 17:19:19,827 | INFO     | chi2: 0.0007250094612333299
[2025-10-11 19:20:41] 2025-10-11 17:19:19,827 | INFO     | -- intersect: -4782762001.259804
[2025-10-11 19:20:41] 2025-10-11 17:19:19,827 | INFO     | current memory leak: 2.72 B/s (using 151 data points, chi2=0.00)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,828 | INFO     | could have reported an average CPU frequency of 2606 MHz (10 samples)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,828 | INFO     | ..............................
[2025-10-11 19:20:41] 2025-10-11 17:19:19,828 | INFO     | . Timing measurements:
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | . get job = 0 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | . initial setup = 1 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | . payload setup = 5 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | . stage-in = 0 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | . payload execution = 12606 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | . stage-out = 1 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | . log creation = 0 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,829 | INFO     | ..............................
[2025-10-11 19:20:41] 2025-10-11 17:19:19,941 | INFO     | 
[2025-10-11 19:20:41] 2025-10-11 17:19:19,941 | INFO     | job summary report
[2025-10-11 19:20:41] 2025-10-11 17:19:19,941 | INFO     | --------------------------------------------------
[2025-10-11 19:20:41] 2025-10-11 17:19:19,941 | INFO     | PanDA job id: 6837555363
[2025-10-11 19:20:41] 2025-10-11 17:19:19,941 | INFO     | task id: 46676269
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | errors: (none)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | pilot state: finished 
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | transexitcode: 0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | exeerrorcode: 0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | exeerrordiag: 
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | exitcode: 0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | exitmsg: OK
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | cpuconsumptiontime: 48563 s
[2025-10-11 19:20:41] 2025-10-11 17:19:19,942 | INFO     | nevents: 400
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | neventsw: 0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | pid: 1764297
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | pgrp: 1764297
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | corecount: 4
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | event service: False
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | sizes: {0: 2348691, 1: 2348890, 5: 2349152, 12: 2349208, 12615: 2379181, 12617: 2388201, 12620: 2388385, 12626: 2388579}
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | --------------------------------------------------
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | 
[2025-10-11 19:20:41] 2025-10-11 17:19:19,943 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-11 19:20:41] 2025-10-11 17:19:19,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,964 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,964 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,965 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:20:41] 2025-10-11 17:19:19,965 | INFO     | job 6837555363 has completed (purged errors)
[2025-10-11 19:20:41] 2025-10-11 17:19:19,965 | INFO     | overall cleanup function is called
[2025-10-11 19:20:41] 2025-10-11 17:19:20,973 | INFO     | --- collectZombieJob: --- 10, [1764297]
[2025-10-11 19:20:41] 2025-10-11 17:19:20,973 | INFO     | zombie collector waiting for pid 1764297
[2025-10-11 19:20:41] 2025-10-11 17:19:20,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:20:41] 2025-10-11 17:19:20,974 | INFO     | collected zombie processes
[2025-10-11 19:20:41] 2025-10-11 17:19:20,974 | INFO     | will attempt to kill all subprocesses of pid=1764297
[2025-10-11 19:20:41] 2025-10-11 17:19:21,307 | INFO     | process IDs to be killed: [1764297] (in reverse order)
[2025-10-11 19:20:41] 2025-10-11 17:19:21,386 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:20:41] 2025-10-11 17:19:21,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:20:41] 2025-10-11 17:19:21,395 | INFO     | did not find any defunct processes belonging to 1764297
[2025-10-11 19:20:41] 2025-10-11 17:19:21,403 | INFO     | did not find any defunct processes belonging to 1764297
[2025-10-11 19:20:41] 2025-10-11 17:19:21,403 | INFO     | ready for new job
[2025-10-11 19:20:41] 2025-10-11 17:19:21,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:20:41] 2025-10-11 17:19:21,405 | INFO     | ***************************************
[2025-10-11 19:20:41] 2025-10-11 17:19:21,406 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:20:41] 2025-10-11 17:19:21,406 | INFO     | ***************************************
[2025-10-11 19:20:41] 2025-10-11 17:19:21,406 | INFO     | 
[2025-10-11 19:20:41] 2025-10-11 17:19:21,408 | INFO     | architecture information:
[2025-10-11 19:20:41] 2025-10-11 17:19:21,409 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:20:41] 2025-10-11 17:19:21,422 | INFO     | cat /etc/os-release:
[2025-10-11 19:20:41] NAME="CentOS Linux"
[2025-10-11 19:20:41] VERSION="7 (Core)"
[2025-10-11 19:20:41] ID="centos"
[2025-10-11 19:20:41] ID_LIKE="rhel fedora"
[2025-10-11 19:20:41] VERSION_ID="7"
[2025-10-11 19:20:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:20:41] ANSI_COLOR="0;31"
[2025-10-11 19:20:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:20:41] HOME_URL="https://www.centos.org/"
[2025-10-11 19:20:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:20:41] 
[2025-10-11 19:20:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:20:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:20:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:20:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:20:41] 
[2025-10-11 19:20:41] 2025-10-11 17:19:21,422 | INFO     | ***************************************
[2025-10-11 19:20:41] 2025-10-11 17:19:21,925 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-11 19:20:41] 2025-10-11 17:19:21,938 | INFO     | sufficient remaining disk space (1674801315840 B)
[2025-10-11 19:20:41] 2025-10-11 17:19:21,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:20:41] 2025-10-11 17:19:21,938 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:20:41] 2025-10-11 17:19:21,938 | INFO     | update_server=False
[2025-10-11 19:20:41] 2025-10-11 17:19:21,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:20:41] 2025-10-11 17:19:21,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:20:41] 2025-10-11 17:19:21,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:20:41] 2025-10-11 17:19:22,039 | INFO     | all job control threads have been joined
[2025-10-11 19:20:41] 2025-10-11 17:19:22,363 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 19:20:41] 2025-10-11 17:19:22,364 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 19:20:41] 2025-10-11 17:19:22,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:20:41] 2025-10-11 17:19:22,364 | INFO     | will abort loop
[2025-10-11 19:20:41] 2025-10-11 17:19:22,715 | INFO     | all data control threads have been joined
[2025-10-11 19:20:41] 2025-10-11 17:19:22,944 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:22,945 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,029 | INFO     | all payload control threads have been joined
[2025-10-11 19:20:41] 2025-10-11 17:19:23,044 | INFO     | [job] control thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,315 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,369 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,720 | INFO     | [data] control thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,721 | INFO     | [job] validate thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,876 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,886 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:23,945 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:24,034 | INFO     | [payload] control thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:24,186 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:24,309 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:24,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:20:41] 2025-10-11 17:19:24,510 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:28,397 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:32,005 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:20:41] 2025-10-11 17:19:33,010 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:20:41] 2025-10-11 17:19:53,302 | INFO     | PID=1750303 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:20:41] 2025-10-11 17:19:53,302 | INFO     | .. there are 3 such processes running
[2025-10-11 19:20:41] 2025-10-11 17:19:53,303 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:20:41] 2025-10-11 17:19:53,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:20:41] 2025-10-11 17:19:53,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:20:41] 2025-10-11 17:19:59,105 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:20:41] 2025-10-11 17:20:00,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23219365488448)>', '<ExcThread(monitor, started 23218924541696)>']
[2025-10-11 19:20:41] 2025-10-11 17:20:01,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:20:41] 2025-10-11 17:20:01,342 | INFO     | [monitor] control thread has ended
[2025-10-11 19:20:41] 2025-10-11 17:20:05,906 | INFO     | all workflow threads have been joined
[2025-10-11 19:20:41] 2025-10-11 17:20:05,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:20:41] 2025-10-11 17:20:05,907 | INFO     | traces error code: 0
[2025-10-11 19:20:41] 2025-10-11 17:20:05,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:20:41] 2025-10-11 17:20:06,028 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:20:41] 2025-10-11 17:20:06,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:20:41] 2025-10-11 17:20:06,033 [wrapper] pilotpid: 1750303
[2025-10-11 19:20:41] 2025-10-11 17:20:06,035 [wrapper] Pilot exit status: 0
[2025-10-11 19:20:41] 2025-10-11 17:20:06,044 [wrapper] pandaids: 6837555363
[2025-10-11 19:20:41] 2025-10-11 17:20:06,093 [wrapper] cleanup supervisor_pilot 1925959 1750304
[2025-10-11 19:20:41] 2025-10-11 17:20:06,096 [wrapper] Test setup, not cleaning
[2025-10-11 19:20:41] 2025-10-11 17:20:06,098 [wrapper] apfmon messages muted
[2025-10-11 19:20:41] 2025-10-11 17:20:06,101 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:20:41] 2025-10-11 17:20:06,103 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:20:41]  *** Error codes and diagnostics ***
[2025-10-11 19:20:41]     "exeErrorCode": 0,
[2025-10-11 19:20:41]     "exeErrorDiag": "",
[2025-10-11 19:20:41]     "pilotErrorCode": 0,
[2025-10-11 19:20:41]     "pilotErrorDiag": "",
[2025-10-11 19:20:41]  *** Listing of results directory ***
[2025-10-11 19:20:41] total 416904
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc    557409 Oct 10 11:06 pilot3.tar.gz
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc      5112 Oct 10 11:17 queuedata.json
[2025-10-11 19:20:41] -rwx------ 1 boinc boinc     36292 Oct 10 11:18 runpilot2-wrapper.sh
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc       100 Oct 11 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:20:41] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 15:48 run_atlas
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc       105 Oct 11 15:48 job.xml
[2025-10-11 19:20:41] -rw-r--r-- 2 boinc boinc 222554028 Oct 11 15:48 EVNT.46676267._001460.pool.root.1
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc      6420 Oct 11 15:48 init_data.xml
[2025-10-11 19:20:41] -rw-r--r-- 2 boinc boinc     15120 Oct 11 15:48 start_atlas.sh
[2025-10-11 19:20:41] drwxrwx--x 2 boinc boinc      4096 Oct 11 15:48 shared
[2025-10-11 19:20:41] -rw-r--r-- 2 boinc boinc    569680 Oct 11 15:48 input.tar.gz
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc         0 Oct 11 15:48 boinc_lockfile
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc      2547 Oct 11 15:48 pandaJob.out
[2025-10-11 19:20:41] -rw------- 1 boinc boinc    975520 Oct 11 15:48 agis_schedconf.cvmfs.json
[2025-10-11 19:20:41] drwx------ 5 boinc boinc      4096 Oct 11 15:48 pilot3
[2025-10-11 19:20:41] -rw------- 1 boinc boinc 196110129 Oct 11 19:18 HITS.46676269._035911.pool.root.1
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc       528 Oct 11 19:18 boinc_task_state.xml
[2025-10-11 19:20:41] -rw------- 1 boinc boinc      1034 Oct 11 19:19 memory_monitor_summary.json
[2025-10-11 19:20:41] -rw------- 1 boinc boinc   1560580 Oct 11 19:19 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:20:41] -rw------- 1 boinc boinc    367686 Oct 11 19:19 log.46676269._035911.job.log.tgz.1
[2025-10-11 19:20:41] -rw------- 1 boinc boinc        95 Oct 11 19:19 pilot_heartbeat.json
[2025-10-11 19:20:41] -rw------- 1 boinc boinc      7828 Oct 11 19:19 heartbeat.json
[2025-10-11 19:20:41] -rw------- 1 boinc boinc      5092 Oct 11 19:20 pilotlog.txt
[2025-10-11 19:20:41] -rw------- 1 boinc boinc   1804369 Oct 11 19:20 log.46676269._035911.job.log.1
[2025-10-11 19:20:41] -rw------- 1 boinc boinc       357 Oct 11 19:20 output.list
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc       620 Oct 11 19:20 runtime_log
[2025-10-11 19:20:41] -rw------- 1 boinc boinc   2191360 Oct 11 19:20 result.tar.gz
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc      9070 Oct 11 19:20 runtime_log.err
[2025-10-11 19:20:41] -rw------- 1 boinc boinc       665 Oct 11 19:20 lYOODmSROR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxtcNDmwQzF0m.diag
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc        26 Oct 11 19:20 wrapper_checkpoint.txt
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc      8192 Oct 11 19:20 boinc_mmap_file
[2025-10-11 19:20:41] -rw-r--r-- 1 boinc boinc     20804 Oct 11 19:20 stderr.txt
[2025-10-11 19:20:41] HITS file was successfully produced:
[2025-10-11 19:20:41] -rw------- 1 boinc boinc 196110129 Oct 11 19:18 shared/HITS.pool.root.1
[2025-10-11 19:20:41]  *** Contents of shared directory: ***
[2025-10-11 19:20:41] total 411576
[2025-10-11 19:20:41] -rw-r--r-- 2 boinc boinc 222554028 Oct 11 15:48 ATLAS.root_0
[2025-10-11 19:20:41] -rw-r--r-- 2 boinc boinc     15120 Oct 11 15:48 start_atlas.sh
[2025-10-11 19:20:41] -rw-r--r-- 2 boinc boinc    569680 Oct 11 15:48 input.tar.gz
[2025-10-11 19:20:41] -rw------- 1 boinc boinc 196110129 Oct 11 19:18 HITS.pool.root.1
[2025-10-11 19:20:41] -rw------- 1 boinc boinc   2191360 Oct 11 19:20 result.tar.gz
19:20:42 (1744958): run_atlas exited; CPU time 49035.749952
19:20:42 (1744958): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN