Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:33:04 (31142): wrapper (7.7.26015): starting
10:33:04 (31142): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 10:33:04] Arguments: --nthreads 8
[2025-10-10 10:33:04] Threads: 8
[2025-10-10 10:33:04] Checking for CVMFS
[2025-10-10 10:33:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:33:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:33:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:33:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:33:04] 2.11.2.0 2817 220126 82828 151548 2 59 20171682 20275200 1 130560 1 75456080 99.972 13516202 12103 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 10:33:04] CVMFS is ok
[2025-10-10 10:33:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:33:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:33:04] Further information can be found at the LHC@home message board.
[2025-10-10 10:33:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:33:04] Checking for apptainer binary...
[2025-10-10 10:33:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:33:04] Running /usr/bin/apptainer --version
[2025-10-10 10:33:04] apptainer version 1.3.2-1.el7
[2025-10-10 10:33:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:33:06] c-204-21.aglt2.org
[2025-10-10 10:33:06] apptainer works
[2025-10-10 10:33:06] Set ATHENA_PROC_NUMBER=8
[2025-10-10 10:33:06] Set ATHENA_CORE_NUMBER=8
[2025-10-10 10:33:06] Starting ATLAS job with PandaID=6837365073
[2025-10-10 10:33:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:53:44]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:53:44] 2025-10-10 16:52:47,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:53:44] 2025-10-10 16:52:47,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:53:44] 2025-10-10 16:52:47,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:53:44] 2025-10-10 16:52:47,301 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:53:44] 2025-10-10 16:52:47,301 | INFO     | sum of square deviations: 797291228.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,302 | INFO     | sum of deviations: 32953119941.000008
[2025-10-10 12:53:44] 2025-10-10 16:52:47,302 | INFO     | mean x: 1760110984.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,302 | INFO     | mean y: 2417818.5474452553
[2025-10-10 12:53:44] 2025-10-10 16:52:47,302 | INFO     | -- intersect: -72745338996.38586
[2025-10-10 12:53:44] 2025-10-10 16:52:47,302 | INFO     | intersect: -72745338996.38586
[2025-10-10 12:53:44] 2025-10-10 16:52:47,303 | INFO     | chi2: 3.52367607777234
[2025-10-10 12:53:44] 2025-10-10 16:52:47,303 | INFO     | sum of square deviations: 713140813.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,304 | INFO     | sum of deviations: 40538502148.99999
[2025-10-10 12:53:44] 2025-10-10 16:52:47,304 | INFO     | mean x: 1760110831.5
[2025-10-10 12:53:44] 2025-10-10 16:52:47,304 | INFO     | mean y: 2431079.878787879
[2025-10-10 12:53:44] 2025-10-10 16:52:47,304 | INFO     | -- intersect: -100051100318.89268
[2025-10-10 12:53:44] 2025-10-10 16:52:47,304 | INFO     | intersect: -100051100318.89268
[2025-10-10 12:53:44] 2025-10-10 16:52:47,304 | INFO     | chi2: 2.7629954351088895
[2025-10-10 12:53:44] 2025-10-10 16:52:47,304 | INFO     | current chi2=2.7629954351088895 (change=21.587700624977742 %)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,305 | INFO     | right removable region: 131
[2025-10-10 12:53:44] 2025-10-10 16:52:47,305 | INFO     | sum of square deviations: 713140813.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,305 | INFO     | sum of deviations: 510429791.5000019
[2025-10-10 12:53:44] 2025-10-10 16:52:47,306 | INFO     | mean x: 1760111136.5
[2025-10-10 12:53:44] 2025-10-10 16:52:47,306 | INFO     | mean y: 2476388.492424242
[2025-10-10 12:53:44] 2025-10-10 16:52:47,306 | INFO     | -- intersect: -1257321317.7153208
[2025-10-10 12:53:44] 2025-10-10 16:52:47,306 | INFO     | intersect: -1257321317.7153208
[2025-10-10 12:53:44] 2025-10-10 16:52:47,306 | INFO     | chi2: 1.1889322351857028
[2025-10-10 12:53:44] 2025-10-10 16:52:47,306 | INFO     | current chi2=1.1889322351857028 (change=66.25875338866724 %)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,307 | INFO     | sum of square deviations: 635130048.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,307 | INFO     | sum of deviations: -8861696249.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,307 | INFO     | mean x: 1760111289.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,307 | INFO     | mean y: 2494359.503937008
[2025-10-10 12:53:44] 2025-10-10 16:52:47,308 | INFO     | -- intersect: 24560569759.447628
[2025-10-10 12:53:44] 2025-10-10 16:52:47,308 | INFO     | intersect: 24560569759.447628
[2025-10-10 12:53:44] 2025-10-10 16:52:47,308 | INFO     | chi2: 0.8309768282898461
[2025-10-10 12:53:44] 2025-10-10 16:52:47,308 | INFO     | current chi2=0.8309768282898461 (change=30.10730101366514 %)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,308 | INFO     | sum of square deviations: 563026370.5
[2025-10-10 12:53:44] 2025-10-10 16:52:47,309 | INFO     | sum of deviations: -10613517398.5
[2025-10-10 12:53:44] 2025-10-10 16:52:47,309 | INFO     | mean x: 1760111441.5
[2025-10-10 12:53:44] 2025-10-10 16:52:47,309 | INFO     | mean y: 2497960.5163934426
[2025-10-10 12:53:44] 2025-10-10 16:52:47,309 | INFO     | -- intersect: 33182068912.174267
[2025-10-10 12:53:44] 2025-10-10 16:52:47,309 | INFO     | intersect: 33182068912.174267
[2025-10-10 12:53:44] 2025-10-10 16:52:47,310 | INFO     | chi2: 0.8037901517673635
[2025-10-10 12:53:44] 2025-10-10 16:52:47,310 | INFO     | current chi2=0.8037901517673635 (change=3.27165278223617 %)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,310 | INFO     | left removable region: 30
[2025-10-10 12:53:44] 2025-10-10 16:52:47,310 | INFO     | sum of square deviations: 319447850.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,311 | INFO     | sum of deviations: -1201044249.9999998
[2025-10-10 12:53:44] 2025-10-10 16:52:47,311 | INFO     | mean x: 1760111716.0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,311 | INFO     | mean y: 2513163.782178218
[2025-10-10 12:53:44] 2025-10-10 16:52:47,311 | INFO     | -- intersect: 6620094267.738372
[2025-10-10 12:53:44] 2025-10-10 16:52:47,311 | INFO     | intersect: 6620094267.738372
[2025-10-10 12:53:44] 2025-10-10 16:52:47,311 | INFO     | chi2: 0.0031913255954907306
[2025-10-10 12:53:44] 2025-10-10 16:52:47,311 | INFO     | -- intersect: 6620094267.738372
[2025-10-10 12:53:44] 2025-10-10 16:52:47,312 | INFO     | current memory leak: -3.76 B/s (using 101 data points, chi2=0.00)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,312 | INFO     | could have reported an average CPU frequency of 2005 MHz (8 samples)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,312 | INFO     | ..............................
[2025-10-10 12:53:44] 2025-10-10 16:52:47,312 | INFO     | . Timing measurements:
[2025-10-10 12:53:44] 2025-10-10 16:52:47,312 | INFO     | . get job = 0 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,312 | INFO     | . initial setup = 2 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,313 | INFO     | . payload setup = 8 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,313 | INFO     | . stage-in = 0 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,313 | INFO     | . payload execution = 8321 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,313 | INFO     | . stage-out = 0 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,313 | INFO     | . log creation = 0 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,313 | INFO     | ..............................
[2025-10-10 12:53:44] 2025-10-10 16:52:47,619 | INFO     | 
[2025-10-10 12:53:44] 2025-10-10 16:52:47,619 | INFO     | job summary report
[2025-10-10 12:53:44] 2025-10-10 16:52:47,620 | INFO     | --------------------------------------------------
[2025-10-10 12:53:44] 2025-10-10 16:52:47,620 | INFO     | PanDA job id: 6837365073
[2025-10-10 12:53:44] 2025-10-10 16:52:47,620 | INFO     | task id: 46676269
[2025-10-10 12:53:44] 2025-10-10 16:52:47,620 | INFO     | errors: (none)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:53:44] 2025-10-10 16:52:47,620 | INFO     | pilot state: finished 
[2025-10-10 12:53:44] 2025-10-10 16:52:47,621 | INFO     | transexitcode: 0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,621 | INFO     | exeerrorcode: 0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,621 | INFO     | exeerrordiag: 
[2025-10-10 12:53:44] 2025-10-10 16:52:47,621 | INFO     | exitcode: 0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,621 | INFO     | exitmsg: OK
[2025-10-10 12:53:44] 2025-10-10 16:52:47,621 | INFO     | cpuconsumptiontime: 59716 s
[2025-10-10 12:53:44] 2025-10-10 16:52:47,622 | INFO     | nevents: 400
[2025-10-10 12:53:44] 2025-10-10 16:52:47,622 | INFO     | neventsw: 0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,622 | INFO     | pid: 8949
[2025-10-10 12:53:44] 2025-10-10 16:52:47,622 | INFO     | pgrp: 8949
[2025-10-10 12:53:44] 2025-10-10 16:52:47,622 | INFO     | corecount: 8
[2025-10-10 12:53:44] 2025-10-10 16:52:47,622 | INFO     | event service: False
[2025-10-10 12:53:44] 2025-10-10 16:52:47,623 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 8334: 2377004, 8335: 2386002, 8338: 2386186, 8345: 2386380}
[2025-10-10 12:53:44] 2025-10-10 16:52:47,623 | INFO     | --------------------------------------------------
[2025-10-10 12:53:44] 2025-10-10 16:52:47,623 | INFO     | 
[2025-10-10 12:53:44] 2025-10-10 16:52:47,623 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 12:53:44] 2025-10-10 16:52:47,650 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,651 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,651 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,651 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,654 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,654 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:53:44] 2025-10-10 16:52:47,654 | INFO     | job 6837365073 has completed (purged errors)
[2025-10-10 12:53:44] 2025-10-10 16:52:47,655 | INFO     | overall cleanup function is called
[2025-10-10 12:53:44] 2025-10-10 16:52:48,662 | INFO     | --- collectZombieJob: --- 10, [8949]
[2025-10-10 12:53:44] 2025-10-10 16:52:48,662 | INFO     | zombie collector waiting for pid 8949
[2025-10-10 12:53:44] 2025-10-10 16:52:48,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:53:44] 2025-10-10 16:52:48,663 | INFO     | collected zombie processes
[2025-10-10 12:53:44] 2025-10-10 16:52:48,663 | INFO     | will attempt to kill all subprocesses of pid=8949
[2025-10-10 12:53:44] 2025-10-10 16:52:48,753 | INFO     | process IDs to be killed: [8949] (in reverse order)
[2025-10-10 12:53:44] 2025-10-10 16:52:48,808 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:53:44] 2025-10-10 16:52:48,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:53:44] 2025-10-10 16:52:48,813 | INFO     | did not find any defunct processes belonging to 8949
[2025-10-10 12:53:44] 2025-10-10 16:52:48,817 | INFO     | did not find any defunct processes belonging to 8949
[2025-10-10 12:53:44] 2025-10-10 16:52:48,817 | INFO     | ready for new job
[2025-10-10 12:53:44] 2025-10-10 16:52:48,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:53:44] 2025-10-10 16:52:48,819 | INFO     | ***************************************
[2025-10-10 12:53:44] 2025-10-10 16:52:48,819 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:53:44] 2025-10-10 16:52:48,819 | INFO     | ***************************************
[2025-10-10 12:53:44] 2025-10-10 16:52:48,819 | INFO     | 
[2025-10-10 12:53:44] 2025-10-10 16:52:48,820 | INFO     | architecture information:
[2025-10-10 12:53:44] 2025-10-10 16:52:48,820 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:53:44] 2025-10-10 16:52:48,839 | INFO     | cat /etc/os-release:
[2025-10-10 12:53:44] NAME="CentOS Linux"
[2025-10-10 12:53:44] VERSION="7 (Core)"
[2025-10-10 12:53:44] ID="centos"
[2025-10-10 12:53:44] ID_LIKE="rhel fedora"
[2025-10-10 12:53:44] VERSION_ID="7"
[2025-10-10 12:53:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:53:44] ANSI_COLOR="0;31"
[2025-10-10 12:53:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:53:44] HOME_URL="https://www.centos.org/"
[2025-10-10 12:53:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:53:44] 
[2025-10-10 12:53:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:53:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:53:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:53:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:53:44] 
[2025-10-10 12:53:44] 2025-10-10 16:52:48,840 | INFO     | ***************************************
[2025-10-10 12:53:44] 2025-10-10 16:52:49,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 12:53:44] 2025-10-10 16:52:49,361 | INFO     | sufficient remaining disk space (18540920832 B)
[2025-10-10 12:53:44] 2025-10-10 16:52:49,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:53:44] 2025-10-10 16:52:49,362 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:53:44] 2025-10-10 16:52:49,362 | INFO     | update_server=False
[2025-10-10 12:53:44] 2025-10-10 16:52:49,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:53:44] 2025-10-10 16:52:49,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:53:44] 2025-10-10 16:52:49,363 | INFO     | aborting loop
[2025-10-10 12:53:44] 2025-10-10 16:52:49,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:53:44] 2025-10-10 16:52:49,562 | INFO     | all data control threads have been joined
[2025-10-10 12:53:44] 2025-10-10 16:52:50,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:53:44] 2025-10-10 16:52:50,069 | INFO     | all payload control threads have been joined
[2025-10-10 12:53:44] 2025-10-10 16:52:50,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:53:44] 2025-10-10 16:52:50,365 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:50,368 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:50,368 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:50,440 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:50,485 | INFO     | all job control threads have been joined
[2025-10-10 12:53:44] 2025-10-10 16:52:50,573 | INFO     | [data] control thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:50,672 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:51,074 | INFO     | [payload] control thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:51,117 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:51,429 | INFO     | [job] validate thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:51,491 | INFO     | [job] control thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:51,623 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:51,841 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:51,842 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:52,038 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:54,176 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:52:59,787 | INFO     | job.realtimelogging is not enabled
[2025-10-10 12:53:44] 2025-10-10 16:53:00,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:53:44] 2025-10-10 16:53:20,391 | INFO     | PID=2433 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-10 12:53:44] 2025-10-10 16:53:20,391 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:53:44] 2025-10-10 16:53:20,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:53:44] 2025-10-10 16:53:20,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:53:44] 2025-10-10 16:53:37,698 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:53:44] 2025-10-10 16:53:39,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719433238336)>', '<ExcThread(monitor, started 140718605584128)>']
[2025-10-10 12:53:44] 2025-10-10 16:53:39,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:53:44] 2025-10-10 16:53:39,483 | INFO     | [monitor] control thread has ended
[2025-10-10 12:53:44] 2025-10-10 16:53:44,012 | INFO     | all workflow threads have been joined
[2025-10-10 12:53:44] 2025-10-10 16:53:44,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:53:44] 2025-10-10 16:53:44,013 | INFO     | traces error code: 0
[2025-10-10 12:53:44] 2025-10-10 16:53:44,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:53:44] 2025-10-10 16:53:44,132 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:53:44] 2025-10-10 16:53:44,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:53:44] 2025-10-10 16:53:44,141 [wrapper] pilotpid: 2433
[2025-10-10 12:53:44] 2025-10-10 16:53:44,146 [wrapper] Pilot exit status: 0
[2025-10-10 12:53:44] 2025-10-10 16:53:44,165 [wrapper] pandaids: 6837365073
[2025-10-10 12:53:44] 2025-10-10 16:53:44,221 [wrapper] cleanup supervisor_pilot 11911 2434
[2025-10-10 12:53:44] 2025-10-10 16:53:44,226 [wrapper] Test setup, not cleaning
[2025-10-10 12:53:44] 2025-10-10 16:53:44,231 [wrapper] apfmon messages muted
[2025-10-10 12:53:44] 2025-10-10 16:53:44,236 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:53:44] 2025-10-10 16:53:44,241 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:53:44]  *** Error codes and diagnostics ***
[2025-10-10 12:53:44]     "exeErrorCode": 0,
[2025-10-10 12:53:44]     "exeErrorDiag": "",
[2025-10-10 12:53:44]     "pilotErrorCode": 0,
[2025-10-10 12:53:44]     "pilotErrorDiag": "",
[2025-10-10 12:53:44]  *** Listing of results directory ***
[2025-10-10 12:53:44] total 422072
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 18:24 pilot3.tar.gz
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 18:35 queuedata.json
[2025-10-10 12:53:44] -rwx------ 1 boincer umatlas     36292 Oct  9 18:38 runpilot2-wrapper.sh
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas       100 Oct 10 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:53:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 10:33 run_atlas
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas       105 Oct 10 10:33 job.xml
[2025-10-10 12:53:44] -rw-r--r-- 2 boincer umatlas 222880963 Oct 10 10:33 EVNT.46676267._001153.pool.root.1
[2025-10-10 12:53:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:33 start_atlas.sh
[2025-10-10 12:53:44] drwxrwx--x 2 boincer umatlas      4096 Oct 10 10:33 shared
[2025-10-10 12:53:44] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 10:33 input.tar.gz
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas         0 Oct 10 10:33 boinc_lockfile
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 10:33 pandaJob.out
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas    975525 Oct 10 10:33 agis_schedconf.cvmfs.json
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas   1560580 Oct 10 10:33 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:53:44] drwx------ 5 boincer umatlas      4096 Oct 10 10:33 pilot3
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas      5910 Oct 10 12:49 init_data.xml
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas 202304648 Oct 10 12:52 HITS.46676269._027449.pool.root.1
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas        95 Oct 10 12:52 pilot_heartbeat.json
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas      1050 Oct 10 12:52 memory_monitor_summary.json
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas       529 Oct 10 12:52 boinc_task_state.xml
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas    385673 Oct 10 12:52 log.46676269._027449.job.log.tgz.1
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas      7847 Oct 10 12:52 heartbeat.json
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 12:53 boinc_mmap_file
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas        27 Oct 10 12:53 wrapper_checkpoint.txt
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas      4817 Oct 10 12:53 pilotlog.txt
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas   1170428 Oct 10 12:53 log.46676269._027449.job.log.1
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas       357 Oct 10 12:53 output.list
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas       620 Oct 10 12:53 runtime_log
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas   1576960 Oct 10 12:53 result.tar.gz
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 12:53 runtime_log.err
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas       661 Oct 10 12:53 GI1NDmFSER8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcWbNDmpJkKWm.diag
[2025-10-10 12:53:44] -rw-r--r-- 1 boincer umatlas     20849 Oct 10 12:53 stderr.txt
[2025-10-10 12:53:44] HITS file was successfully produced:
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas 202304648 Oct 10 12:52 shared/HITS.pool.root.1
[2025-10-10 12:53:44]  *** Contents of shared directory: ***
[2025-10-10 12:53:44] total 417344
[2025-10-10 12:53:44] -rw-r--r-- 2 boincer umatlas 222880963 Oct 10 10:33 ATLAS.root_0
[2025-10-10 12:53:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:33 start_atlas.sh
[2025-10-10 12:53:44] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 10:33 input.tar.gz
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas 202304648 Oct 10 12:52 HITS.pool.root.1
[2025-10-10 12:53:44] -rw------- 1 boincer umatlas   1576960 Oct 10 12:53 result.tar.gz
12:53:46 (31142): run_atlas exited; CPU time 59656.719797
12:53:46 (31142): called boinc_finish(0)

</stderr_txt>
]]>

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