Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:27:31 (43851): wrapper (7.7.26015): starting
10:27:31 (43851): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 10:27:31] Arguments: --nthreads 8
[2025-10-10 10:27:31] Threads: 8
[2025-10-10 10:27:31] Checking for CVMFS
[2025-10-10 10:27:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:27:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:27:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:27:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:27:32] 2.11.2.0 5808 102811 98784 151548 3 59 14383740 18432001 2749 130560 0 59176862 99.976 3846032 3999 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-10 10:27:32] CVMFS is ok
[2025-10-10 10:27:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:27:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:27:32] Further information can be found at the LHC@home message board.
[2025-10-10 10:27:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:27:32] Checking for apptainer binary...
[2025-10-10 10:27:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:27:32] Running /usr/bin/apptainer --version
[2025-10-10 10:27:32] apptainer version 1.3.2-1.el7
[2025-10-10 10:27:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:27:33] c-9-34.aglt2.org
[2025-10-10 10:27:33] apptainer works
[2025-10-10 10:27:33] Set ATHENA_PROC_NUMBER=8
[2025-10-10 10:27:33] Set ATHENA_CORE_NUMBER=8
[2025-10-10 10:27:33] Starting ATLAS job with PandaID=6826883321
[2025-10-10 10:27:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:53:04]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:53:04] 2025-10-10 16:52:20,640 | INFO     | extracted standard info from prmon json
[2025-10-10 12:53:04] 2025-10-10 16:52:20,640 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:53:04] 2025-10-10 16:52:20,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:53:04] 2025-10-10 16:52:20,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:53:04] 2025-10-10 16:52:20,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:53:04] 2025-10-10 16:52:20,646 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:53:04] 2025-10-10 16:52:20,646 | INFO     | sum of square deviations: 887813855.5
[2025-10-10 12:53:04] 2025-10-10 16:52:20,647 | INFO     | sum of deviations: 9244166615.000002
[2025-10-10 12:53:04] 2025-10-10 16:52:20,647 | INFO     | mean x: 1760110789.5
[2025-10-10 12:53:04] 2025-10-10 16:52:20,648 | INFO     | mean y: 2469664.3098591547
[2025-10-10 12:53:04] 2025-10-10 16:52:20,648 | INFO     | -- intersect: -18324297031.433823
[2025-10-10 12:53:04] 2025-10-10 16:52:20,648 | INFO     | intersect: -18324297031.433823
[2025-10-10 12:53:04] 2025-10-10 16:52:20,649 | INFO     | chi2: 1.3431615291070353
[2025-10-10 12:53:04] 2025-10-10 16:52:20,649 | INFO     | sum of square deviations: 797291228.0
[2025-10-10 12:53:04] 2025-10-10 16:52:20,650 | INFO     | sum of deviations: 8898567577.0
[2025-10-10 12:53:04] 2025-10-10 16:52:20,650 | INFO     | mean x: 1760110637.0
[2025-10-10 12:53:04] 2025-10-10 16:52:20,651 | INFO     | mean y: 2469081.9343065694
[2025-10-10 12:53:04] 2025-10-10 16:52:20,651 | INFO     | -- intersect: -19642126137.845306
[2025-10-10 12:53:04] 2025-10-10 16:52:20,651 | INFO     | intersect: -19642126137.845306
[2025-10-10 12:53:04] 2025-10-10 16:52:20,651 | INFO     | chi2: 1.3446386356323985
[2025-10-10 12:53:04] 2025-10-10 16:52:20,652 | INFO     | current chi2=1.3446386356323985 (change=-0.10997236693826111 %)
[2025-10-10 12:53:04] 2025-10-10 16:52:20,652 | INFO     | right removable region: 136
[2025-10-10 12:53:04] 2025-10-10 16:52:20,652 | INFO     | sum of square deviations: 797291228.0
[2025-10-10 12:53:04] 2025-10-10 16:52:20,653 | INFO     | sum of deviations: -8977277768.000004
[2025-10-10 12:53:04] 2025-10-10 16:52:20,653 | INFO     | mean x: 1760110942.0
[2025-10-10 12:53:04] 2025-10-10 16:52:20,654 | INFO     | mean y: 2499788.2116788323
[2025-10-10 12:53:04] 2025-10-10 16:52:20,654 | INFO     | -- intersect: 19820860098.617783
[2025-10-10 12:53:04] 2025-10-10 16:52:20,654 | INFO     | intersect: 19820860098.617783
[2025-10-10 12:53:04] 2025-10-10 16:52:20,654 | INFO     | chi2: 0.06322653202358008
[2025-10-10 12:53:04] 2025-10-10 16:52:20,655 | INFO     | current chi2=0.06322653202358008 (change=95.2927082369896 %)
[2025-10-10 12:53:04] 2025-10-10 16:52:20,655 | INFO     | sum of square deviations: 713140813.0
[2025-10-10 12:53:04] 2025-10-10 16:52:20,656 | INFO     | sum of deviations: -5504689470.999999
[2025-10-10 12:53:04] 2025-10-10 16:52:20,656 | INFO     | mean x: 1760111094.5
[2025-10-10 12:53:04] 2025-10-10 16:52:20,656 | INFO     | mean y: 2493495.212121212
[2025-10-10 12:53:04] 2025-10-10 16:52:20,656 | INFO     | -- intersect: 13588681290.194532
[2025-10-10 12:53:04] 2025-10-10 16:52:20,657 | INFO     | intersect: 13588681290.194532
[2025-10-10 12:53:04] 2025-10-10 16:52:20,657 | INFO     | chi2: 0.048588380105690894
[2025-10-10 12:53:04] 2025-10-10 16:52:20,657 | INFO     | current chi2=0.048588380105690894 (change=23.151913365151753 %)
[2025-10-10 12:53:04] 2025-10-10 16:52:20,657 | INFO     | left removable region: 20
[2025-10-10 12:53:04] 2025-10-10 16:52:20,658 | INFO     | sum of square deviations: 483971865.0
[2025-10-10 12:53:04] 2025-10-10 16:52:20,658 | INFO     | sum of deviations: 712568205.9999999
[2025-10-10 12:53:04] 2025-10-10 16:52:20,659 | INFO     | mean x: 1760111216.5
[2025-10-10 12:53:04] 2025-10-10 16:52:20,659 | INFO     | mean y: 2480417.793103448
[2025-10-10 12:53:04] 2025-10-10 16:52:20,659 | INFO     | -- intersect: -2588991075.9101152
[2025-10-10 12:53:04] 2025-10-10 16:52:20,659 | INFO     | intersect: -2588991075.9101152
[2025-10-10 12:53:04] 2025-10-10 16:52:20,659 | INFO     | chi2: 6.500721115143036e-05
[2025-10-10 12:53:04] 2025-10-10 16:52:20,660 | INFO     | -- intersect: -2588991075.9101152
[2025-10-10 12:53:04] 2025-10-10 16:52:20,660 | INFO     | current memory leak: 1.47 B/s (using 116 data points, chi2=0.00)
[2025-10-10 12:53:04] 2025-10-10 16:52:20,660 | INFO     | could have reported an average CPU frequency of 2999 MHz (8 samples)
[2025-10-10 12:53:04] 2025-10-10 16:52:20,660 | INFO     | ..............................
[2025-10-10 12:53:04] 2025-10-10 16:52:20,661 | INFO     | . Timing measurements:
[2025-10-10 12:53:04] 2025-10-10 16:52:20,661 | INFO     | . get job = 0 s
[2025-10-10 12:53:04] 2025-10-10 16:52:20,661 | INFO     | . initial setup = 2 s
[2025-10-10 12:53:04] 2025-10-10 16:52:20,661 | INFO     | . payload setup = 4 s
[2025-10-10 12:53:04] 2025-10-10 16:52:20,661 | INFO     | . stage-in = 0 s
[2025-10-10 12:53:04] 2025-10-10 16:52:20,661 | INFO     | . payload execution = 8646 s
[2025-10-10 12:53:04] 2025-10-10 16:52:20,662 | INFO     | . stage-out = 1 s
[2025-10-10 12:53:04] 2025-10-10 16:52:20,662 | INFO     | . log creation = 0 s
[2025-10-10 12:53:04] 2025-10-10 16:52:20,662 | INFO     | ..............................
[2025-10-10 12:53:04] 2025-10-10 16:52:20,804 | INFO     | number of running child processes to parent process 6741: 1
[2025-10-10 12:53:04] 2025-10-10 16:52:20,804 | INFO     | maximum number of monitored processes: 6
[2025-10-10 12:53:04] 2025-10-10 16:52:20,805 | INFO     | aborting job monitoring since job object (job id=6826883321) has expired
[2025-10-10 12:53:04] 2025-10-10 16:52:21,037 | INFO     | 
[2025-10-10 12:53:04] 2025-10-10 16:52:21,037 | INFO     | job summary report
[2025-10-10 12:53:04] 2025-10-10 16:52:21,037 | INFO     | --------------------------------------------------
[2025-10-10 12:53:04] 2025-10-10 16:52:21,037 | INFO     | PanDA job id: 6826883321
[2025-10-10 12:53:04] 2025-10-10 16:52:21,037 | INFO     | task id: 46376905
[2025-10-10 12:53:04] 2025-10-10 16:52:21,038 | INFO     | errors: (none)
[2025-10-10 12:53:04] 2025-10-10 16:52:21,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:53:04] 2025-10-10 16:52:21,038 | INFO     | pilot state: finished 
[2025-10-10 12:53:04] 2025-10-10 16:52:21,038 | INFO     | transexitcode: 0
[2025-10-10 12:53:04] 2025-10-10 16:52:21,038 | INFO     | exeerrorcode: 0
[2025-10-10 12:53:04] 2025-10-10 16:52:21,038 | INFO     | exeerrordiag: 
[2025-10-10 12:53:04] 2025-10-10 16:52:21,038 | INFO     | exitcode: 0
[2025-10-10 12:53:04] 2025-10-10 16:52:21,039 | INFO     | exitmsg: OK
[2025-10-10 12:53:04] 2025-10-10 16:52:21,039 | INFO     | cpuconsumptiontime: 64406 s
[2025-10-10 12:53:04] 2025-10-10 16:52:21,039 | INFO     | nevents: 400
[2025-10-10 12:53:04] 2025-10-10 16:52:21,039 | INFO     | neventsw: 0
[2025-10-10 12:53:04] 2025-10-10 16:52:21,039 | INFO     | pid: 6741
[2025-10-10 12:53:04] 2025-10-10 16:52:21,039 | INFO     | pgrp: 6741
[2025-10-10 12:53:04] 2025-10-10 16:52:21,040 | INFO     | corecount: 8
[2025-10-10 12:53:04] 2025-10-10 16:52:21,040 | INFO     | event service: False
[2025-10-10 12:53:04] 2025-10-10 16:52:21,040 | INFO     | sizes: {0: 2347982, 1: 2348838, 5: 2349100, 12: 2349156, 8655: 2377191, 8658: 2386373, 8662: 2386511}
[2025-10-10 12:53:04] 2025-10-10 16:52:21,040 | INFO     | --------------------------------------------------
[2025-10-10 12:53:04] 2025-10-10 16:52:21,040 | INFO     | 
[2025-10-10 12:53:04] 2025-10-10 16:52:21,040 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 12:53:04] 2025-10-10 16:52:21,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,060 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:53:04] 2025-10-10 16:52:21,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:53:04] 2025-10-10 16:52:21,064 | INFO     | job 6826883321 has completed (purged errors)
[2025-10-10 12:53:04] 2025-10-10 16:52:21,064 | INFO     | overall cleanup function is called
[2025-10-10 12:53:04] 2025-10-10 16:52:22,072 | INFO     | --- collectZombieJob: --- 10, [6741]
[2025-10-10 12:53:04] 2025-10-10 16:52:22,072 | INFO     | zombie collector waiting for pid 6741
[2025-10-10 12:53:04] 2025-10-10 16:52:22,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:53:04] 2025-10-10 16:52:22,073 | INFO     | collected zombie processes
[2025-10-10 12:53:04] 2025-10-10 16:52:22,073 | INFO     | will attempt to kill all subprocesses of pid=6741
[2025-10-10 12:53:04] 2025-10-10 16:52:22,337 | INFO     | process IDs to be killed: [6741] (in reverse order)
[2025-10-10 12:53:04] 2025-10-10 16:52:22,414 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:53:04] 2025-10-10 16:52:22,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:53:04] 2025-10-10 16:52:22,420 | INFO     | did not find any defunct processes belonging to 6741
[2025-10-10 12:53:04] 2025-10-10 16:52:22,424 | INFO     | did not find any defunct processes belonging to 6741
[2025-10-10 12:53:04] 2025-10-10 16:52:22,424 | INFO     | ready for new job
[2025-10-10 12:53:04] 2025-10-10 16:52:22,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:53:04] 2025-10-10 16:52:22,426 | INFO     | ***************************************
[2025-10-10 12:53:04] 2025-10-10 16:52:22,426 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 12:53:04] 2025-10-10 16:52:22,426 | INFO     | ***************************************
[2025-10-10 12:53:04] 2025-10-10 16:52:22,426 | INFO     | 
[2025-10-10 12:53:04] 2025-10-10 16:52:22,427 | INFO     | architecture information:
[2025-10-10 12:53:04] 2025-10-10 16:52:22,428 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:53:04] 2025-10-10 16:52:22,441 | INFO     | cat /etc/os-release:
[2025-10-10 12:53:04] NAME="CentOS Linux"
[2025-10-10 12:53:04] VERSION="7 (Core)"
[2025-10-10 12:53:04] ID="centos"
[2025-10-10 12:53:04] ID_LIKE="rhel fedora"
[2025-10-10 12:53:04] VERSION_ID="7"
[2025-10-10 12:53:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:53:04] ANSI_COLOR="0;31"
[2025-10-10 12:53:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:53:04] HOME_URL="https://www.centos.org/"
[2025-10-10 12:53:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:53:04] 
[2025-10-10 12:53:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:53:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:53:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:53:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:53:04] 
[2025-10-10 12:53:04] 2025-10-10 16:52:22,442 | INFO     | ***************************************
[2025-10-10 12:53:04] 2025-10-10 16:52:22,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 12:53:04] 2025-10-10 16:52:22,964 | INFO     | sufficient remaining disk space (104881717248 B)
[2025-10-10 12:53:04] 2025-10-10 16:52:22,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:53:04] 2025-10-10 16:52:22,964 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:53:04] 2025-10-10 16:52:22,964 | INFO     | update_server=False
[2025-10-10 12:53:04] 2025-10-10 16:52:22,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:53:04] 2025-10-10 16:52:22,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:53:04] 2025-10-10 16:52:22,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:53:04] 2025-10-10 16:52:23,045 | INFO     | all payload control threads have been joined
[2025-10-10 12:53:04] 2025-10-10 16:52:23,308 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 12:53:04] 2025-10-10 16:52:23,308 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 12:53:04] 2025-10-10 16:52:23,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:53:04] 2025-10-10 16:52:23,309 | INFO     | will abort loop
[2025-10-10 12:53:04] 2025-10-10 16:52:23,636 | INFO     | all data control threads have been joined
[2025-10-10 12:53:04] 2025-10-10 16:52:23,968 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:24,030 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:24,051 | INFO     | [payload] control thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:24,266 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:24,313 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:24,466 | INFO     | all job control threads have been joined
[2025-10-10 12:53:04] 2025-10-10 16:52:24,641 | INFO     | [data] control thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:24,966 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:25,020 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:25,021 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:25,045 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:25,126 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:25,162 | INFO     | [job] validate thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:25,471 | INFO     | [job] control thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:25,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:53:04] 2025-10-10 16:52:26,817 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:26,982 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:33,811 | INFO     | job.realtimelogging is not enabled
[2025-10-10 12:53:04] 2025-10-10 16:52:34,816 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:53:04] 2025-10-10 16:52:53,203 | INFO     | PID=48074 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 12:53:04] 2025-10-10 16:52:53,204 | INFO     | .. there are 4 such processes running
[2025-10-10 12:53:04] 2025-10-10 16:52:53,204 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:53:04] 2025-10-10 16:52:53,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:53:04] 2025-10-10 16:52:53,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:53:04] 2025-10-10 16:52:58,421 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:53:04] 2025-10-10 16:52:59,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845126203200)>', '<ExcThread(monitor, started 139844361627392)>']
[2025-10-10 12:53:04] 2025-10-10 16:53:00,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:53:04] 2025-10-10 16:53:00,242 | INFO     | [monitor] control thread has ended
[2025-10-10 12:53:04] 2025-10-10 16:53:04,614 | INFO     | all workflow threads have been joined
[2025-10-10 12:53:04] 2025-10-10 16:53:04,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:53:04] 2025-10-10 16:53:04,615 | INFO     | traces error code: 0
[2025-10-10 12:53:04] 2025-10-10 16:53:04,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:53:04] 2025-10-10 16:53:04,725 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:53:04] 2025-10-10 16:53:04,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:53:04] 2025-10-10 16:53:04,730 [wrapper] pilotpid: 48074
[2025-10-10 12:53:04] 2025-10-10 16:53:04,732 [wrapper] Pilot exit status: 0
[2025-10-10 12:53:04] 2025-10-10 16:53:04,747 [wrapper] pandaids: 6826883321
[2025-10-10 12:53:04] 2025-10-10 16:53:04,794 [wrapper] cleanup supervisor_pilot 33518 48075
[2025-10-10 12:53:04] 2025-10-10 16:53:04,798 [wrapper] Test setup, not cleaning
[2025-10-10 12:53:04] 2025-10-10 16:53:04,799 [wrapper] apfmon messages muted
[2025-10-10 12:53:04] 2025-10-10 16:53:04,802 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:53:04] 2025-10-10 16:53:04,804 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:53:04]  *** Error codes and diagnostics ***
[2025-10-10 12:53:04]     "exeErrorCode": 0,
[2025-10-10 12:53:04]     "exeErrorDiag": "",
[2025-10-10 12:53:04]     "pilotErrorCode": 0,
[2025-10-10 12:53:04]     "pilotErrorDiag": "",
[2025-10-10 12:53:04]  *** Listing of results directory ***
[2025-10-10 12:53:04] total 390516
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas    552446 Oct  2 00:12 pilot3.tar.gz
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas      5112 Oct  2 00:27 queuedata.json
[2025-10-10 12:53:04] -rwx------ 1 boincer umatlas     36292 Oct  2 00:29 runpilot2-wrapper.sh
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas       100 Oct 10 10:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:53:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 10:27 run_atlas
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas       105 Oct 10 10:27 job.xml
[2025-10-10 12:53:04] -rw-r--r-- 2 boincer umatlas 217405680 Oct 10 10:27 EVNT.46376901._000316.pool.root.1
[2025-10-10 12:53:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:27 start_atlas.sh
[2025-10-10 12:53:04] drwxrwx--x 2 boincer umatlas      4096 Oct 10 10:27 shared
[2025-10-10 12:53:04] -rw-r--r-- 2 boincer umatlas    565607 Oct 10 10:27 input.tar.gz
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas         0 Oct 10 10:27 boinc_lockfile
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas      2516 Oct 10 10:27 pandaJob.out
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas    975525 Oct 10 10:27 agis_schedconf.cvmfs.json
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas   1560580 Oct 10 10:27 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:53:04] drwx------ 4 boincer umatlas      4096 Oct 10 10:27 pilot3
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas      6035 Oct 10 12:49 init_data.xml
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas 175393244 Oct 10 12:51 HITS.46376905._022404.pool.root.1
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas       529 Oct 10 12:51 boinc_task_state.xml
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas        95 Oct 10 12:52 pilot_heartbeat.json
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas      1048 Oct 10 12:52 memory_monitor_summary.json
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas    394182 Oct 10 12:52 log.46376905._022404.job.log.tgz.1
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas      7826 Oct 10 12:52 heartbeat.json
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 12:52 boinc_mmap_file
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas        27 Oct 10 12:52 wrapper_checkpoint.txt
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas      5080 Oct 10 12:53 pilotlog.txt
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas   1205984 Oct 10 12:53 log.46376905._022404.job.log.1
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas       357 Oct 10 12:53 output.list
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas       620 Oct 10 12:53 runtime_log
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas   1617920 Oct 10 12:53 result.tar.gz
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas       656 Oct 10 12:53 rVTMDmm7PO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAtDNDmBmAPwn.diag
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas      8693 Oct 10 12:53 runtime_log.err
[2025-10-10 12:53:04] -rw-r--r-- 1 boincer umatlas     20996 Oct 10 12:53 stderr.txt
[2025-10-10 12:53:04] HITS file was successfully produced:
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas 175393244 Oct 10 12:51 shared/HITS.pool.root.1
[2025-10-10 12:53:04]  *** Contents of shared directory: ***
[2025-10-10 12:53:04] total 385752
[2025-10-10 12:53:04] -rw-r--r-- 2 boincer umatlas 217405680 Oct 10 10:27 ATLAS.root_0
[2025-10-10 12:53:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:27 start_atlas.sh
[2025-10-10 12:53:04] -rw-r--r-- 2 boincer umatlas    565607 Oct 10 10:27 input.tar.gz
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas 175393244 Oct 10 12:51 HITS.pool.root.1
[2025-10-10 12:53:04] -rw------- 1 boincer umatlas   1617920 Oct 10 12:53 result.tar.gz
12:53:06 (43851): run_atlas exited; CPU time 64655.805036
12:53:06 (43851): called boinc_finish(0)

</stderr_txt>
]]>

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