Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:33 (17759): wrapper (7.7.26015): starting
10:23:33 (17759): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 10:23:33] Arguments: --nthreads 8
[2025-10-10 10:23:33] Threads: 8
[2025-10-10 10:23:33] Checking for CVMFS
[2025-10-10 10:23:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:23:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:23:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:23:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:23:33] 2.11.2.0 14729 50103 124444 151548 1 188 14061293 18432001 1789 130560 0 44404355 99.974 2168850 37807 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 10:23:33] CVMFS is ok
[2025-10-10 10:23:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:23:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:23:33] Further information can be found at the LHC@home message board.
[2025-10-10 10:23:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:23:33] Checking for apptainer binary...
[2025-10-10 10:23:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:23:33] Running /usr/bin/apptainer --version
[2025-10-10 10:23:33] apptainer version 1.3.2-1.el7
[2025-10-10 10:23:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:23:34] c-206-30.aglt2.org
[2025-10-10 10:23:34] apptainer works
[2025-10-10 10:23:34] Set ATHENA_PROC_NUMBER=8
[2025-10-10 10:23:34] Set ATHENA_CORE_NUMBER=8
[2025-10-10 10:23:34] Starting ATLAS job with PandaID=6826698401
[2025-10-10 10:23:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 14:20:13]  *** The last 200 lines of the pilot log: ***
[2025-10-10 14:20:13] 2025-10-10 18:19:16,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 14:20:13] 2025-10-10 18:19:16,572 | INFO     | fitting pss+swap vs Time
[2025-10-10 14:20:13] 2025-10-10 18:19:16,573 | INFO     | sum of square deviations: 3871990738.0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,573 | INFO     | time since job start (14132s) is within the limit (172800.0s)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,576 | INFO     | sum of deviations: 16676310722.999996
[2025-10-10 14:20:13] 2025-10-10 18:19:16,576 | INFO     | mean x: 1760113292.5
[2025-10-10 14:20:13] 2025-10-10 18:19:16,576 | INFO     | mean y: 2465219.5086206896
[2025-10-10 14:20:13] 2025-10-10 18:19:16,576 | INFO     | -- intersect: -7578182090.7620325
[2025-10-10 14:20:13] 2025-10-10 18:19:16,576 | INFO     | intersect: -7578182090.7620325
[2025-10-10 14:20:13] 2025-10-10 18:19:16,577 | INFO     | chi2: 2.0275403916262094
[2025-10-10 14:20:13] 2025-10-10 18:19:16,577 | INFO     | sum of square deviations: 3627000098.0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,579 | INFO     | sum of deviations: 31418715144.000004
[2025-10-10 14:20:13] 2025-10-10 18:19:16,580 | INFO     | mean x: 1760113140.0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,580 | INFO     | mean y: 2474230.3436123347
[2025-10-10 14:20:13] 2025-10-10 18:19:16,580 | INFO     | -- intersect: -15244421791.899448
[2025-10-10 14:20:13] 2025-10-10 18:19:16,580 | INFO     | intersect: -15244421791.899448
[2025-10-10 14:20:13] 2025-10-10 18:19:16,581 | INFO     | chi2: 1.2549013125805886
[2025-10-10 14:20:13] 2025-10-10 18:19:16,581 | INFO     | current chi2=1.2549013125805886 (change=38.10721020585527 %)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,581 | INFO     | sum of square deviations: 3392567795.5
[2025-10-10 14:20:13] 2025-10-10 18:19:16,583 | INFO     | sum of deviations: 30616793772.000008
[2025-10-10 14:20:13] 2025-10-10 18:19:16,583 | INFO     | mean x: 1760112987.5
[2025-10-10 14:20:13] 2025-10-10 18:19:16,584 | INFO     | mean y: 2473708.603603604
[2025-10-10 14:20:13] 2025-10-10 18:19:16,584 | INFO     | -- intersect: -15881959441.17347
[2025-10-10 14:20:13] 2025-10-10 18:19:16,584 | INFO     | intersect: -15881959441.17347
[2025-10-10 14:20:13] 2025-10-10 18:19:16,585 | INFO     | chi2: 1.255363687981866
[2025-10-10 14:20:13] 2025-10-10 18:19:16,585 | INFO     | current chi2=1.255363687981866 (change=-0.036845558821396666 %)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,585 | INFO     | right removable region: 221
[2025-10-10 14:20:13] 2025-10-10 18:19:16,585 | INFO     | sum of square deviations: 3627000098.0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,588 | INFO     | sum of deviations: -14234198841.999994
[2025-10-10 14:20:13] 2025-10-10 18:19:16,588 | INFO     | mean x: 1760113445.0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,588 | INFO     | mean y: 2484271.1718061673
[2025-10-10 14:20:13] 2025-10-10 18:19:16,588 | INFO     | -- intersect: 6910067420.789803
[2025-10-10 14:20:13] 2025-10-10 18:19:16,588 | INFO     | intersect: 6910067420.789803
[2025-10-10 14:20:13] 2025-10-10 18:19:16,589 | INFO     | chi2: 0.8275493843171163
[2025-10-10 14:20:13] 2025-10-10 18:19:16,589 | INFO     | current chi2=0.8275493843171163 (change=59.184567284828695 %)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,590 | INFO     | sum of square deviations: 3392567795.5
[2025-10-10 14:20:13] 2025-10-10 18:19:16,592 | INFO     | sum of deviations: -16845145638.5
[2025-10-10 14:20:13] 2025-10-10 18:19:16,592 | INFO     | mean x: 1760113597.5
[2025-10-10 14:20:13] 2025-10-10 18:19:16,592 | INFO     | mean y: 2485934.599099099
[2025-10-10 14:20:13] 2025-10-10 18:19:16,592 | INFO     | -- intersect: 8741992903.190691
[2025-10-10 14:20:13] 2025-10-10 18:19:16,592 | INFO     | intersect: 8741992903.190691
[2025-10-10 14:20:13] 2025-10-10 18:19:16,593 | INFO     | chi2: 0.8077023183033607
[2025-10-10 14:20:13] 2025-10-10 18:19:16,593 | INFO     | current chi2=0.8077023183033607 (change=2.398293852895944 %)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,593 | INFO     | left removable region: 20
[2025-10-10 14:20:13] 2025-10-10 18:19:16,594 | INFO     | sum of square deviations: 2518000700.0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,595 | INFO     | sum of deviations: 4065700203.0000005
[2025-10-10 14:20:13] 2025-10-10 18:19:16,596 | INFO     | mean x: 1760113567.0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,596 | INFO     | mean y: 2491022.263681592
[2025-10-10 14:20:13] 2025-10-10 18:19:16,596 | INFO     | -- intersect: -2839483599.3696465
[2025-10-10 14:20:13] 2025-10-10 18:19:16,596 | INFO     | intersect: -2839483599.3696465
[2025-10-10 14:20:13] 2025-10-10 18:19:16,597 | INFO     | chi2: 0.0036478534261859025
[2025-10-10 14:20:13] 2025-10-10 18:19:16,597 | INFO     | -- intersect: -2839483599.3696465
[2025-10-10 14:20:13] 2025-10-10 18:19:16,597 | INFO     | current memory leak: 1.61 B/s (using 201 data points, chi2=0.00)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,598 | INFO     | could have reported an average CPU frequency of 2493 MHz (11 samples)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,598 | INFO     | ..............................
[2025-10-10 14:20:13] 2025-10-10 18:19:16,598 | INFO     | . Timing measurements:
[2025-10-10 14:20:13] 2025-10-10 18:19:16,598 | INFO     | . get job = 0 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,598 | INFO     | . initial setup = 2 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,599 | INFO     | . payload setup = 4 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,599 | INFO     | . stage-in = 0 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,599 | INFO     | . payload execution = 14101 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,599 | INFO     | . stage-out = 2 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,599 | INFO     | . log creation = 0 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,600 | INFO     | ..............................
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | 
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | job summary report
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | --------------------------------------------------
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | PanDA job id: 6826698401
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | task id: 46373048
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | errors: (none)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 14:20:13] 2025-10-10 18:19:16,747 | INFO     | pilot state: finished 
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | transexitcode: 0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | exeerrorcode: 0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | exeerrordiag: 
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | exitcode: 0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | exitmsg: OK
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | cpuconsumptiontime: 106893 s
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | nevents: 400
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | neventsw: 0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | pid: 28684
[2025-10-10 14:20:13] 2025-10-10 18:19:16,748 | INFO     | pgrp: 28684
[2025-10-10 14:20:13] 2025-10-10 18:19:16,749 | INFO     | corecount: 8
[2025-10-10 14:20:13] 2025-10-10 18:19:16,749 | INFO     | event service: False
[2025-10-10 14:20:13] 2025-10-10 18:19:16,749 | INFO     | sizes: {0: 2348664, 1: 2348863, 4: 2349125, 12: 2349153, 14109: 2379674, 14112: 2388672, 14113: 2388856, 14118: 2389050}
[2025-10-10 14:20:13] 2025-10-10 18:19:16,749 | INFO     | --------------------------------------------------
[2025-10-10 14:20:13] 2025-10-10 18:19:16,749 | INFO     | 
[2025-10-10 14:20:13] 2025-10-10 18:19:16,749 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 14:20:13] 2025-10-10 18:19:16,766 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,770 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,770 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 14:20:13] 2025-10-10 18:19:16,770 | INFO     | job 6826698401 has completed (purged errors)
[2025-10-10 14:20:13] 2025-10-10 18:19:16,770 | INFO     | overall cleanup function is called
[2025-10-10 14:20:13] 2025-10-10 18:19:17,777 | INFO     | --- collectZombieJob: --- 10, [28684]
[2025-10-10 14:20:13] 2025-10-10 18:19:17,778 | INFO     | zombie collector waiting for pid 28684
[2025-10-10 14:20:13] 2025-10-10 18:19:17,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 14:20:13] 2025-10-10 18:19:17,778 | INFO     | collected zombie processes
[2025-10-10 14:20:13] 2025-10-10 18:19:17,778 | INFO     | will attempt to kill all subprocesses of pid=28684
[2025-10-10 14:20:13] 2025-10-10 18:19:17,944 | INFO     | process IDs to be killed: [28684] (in reverse order)
[2025-10-10 14:20:13] 2025-10-10 18:19:18,009 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 14:20:13] 2025-10-10 18:19:18,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 14:20:13] 2025-10-10 18:19:18,012 | INFO     | did not find any defunct processes belonging to 28684
[2025-10-10 14:20:13] 2025-10-10 18:19:18,014 | INFO     | did not find any defunct processes belonging to 28684
[2025-10-10 14:20:13] 2025-10-10 18:19:18,014 | INFO     | ready for new job
[2025-10-10 14:20:13] 2025-10-10 18:19:18,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 14:20:13] 2025-10-10 18:19:18,016 | INFO     | ***************************************
[2025-10-10 14:20:13] 2025-10-10 18:19:18,016 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 14:20:13] 2025-10-10 18:19:18,016 | INFO     | ***************************************
[2025-10-10 14:20:13] 2025-10-10 18:19:18,016 | INFO     | 
[2025-10-10 14:20:13] 2025-10-10 18:19:18,017 | INFO     | architecture information:
[2025-10-10 14:20:13] 2025-10-10 18:19:18,017 | INFO     | executing command: cat /etc/os-release
[2025-10-10 14:20:13] 2025-10-10 18:19:18,032 | INFO     | cat /etc/os-release:
[2025-10-10 14:20:13] NAME="CentOS Linux"
[2025-10-10 14:20:13] VERSION="7 (Core)"
[2025-10-10 14:20:13] ID="centos"
[2025-10-10 14:20:13] ID_LIKE="rhel fedora"
[2025-10-10 14:20:13] VERSION_ID="7"
[2025-10-10 14:20:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 14:20:13] ANSI_COLOR="0;31"
[2025-10-10 14:20:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 14:20:13] HOME_URL="https://www.centos.org/"
[2025-10-10 14:20:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 14:20:13] 
[2025-10-10 14:20:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 14:20:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 14:20:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 14:20:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 14:20:13] 
[2025-10-10 14:20:13] 2025-10-10 18:19:18,032 | INFO     | ***************************************
[2025-10-10 14:20:13] 2025-10-10 18:19:18,535 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 14:20:13] 2025-10-10 18:19:18,670 | INFO     | sufficient remaining disk space (28121759744 B)
[2025-10-10 14:20:13] 2025-10-10 18:19:18,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 14:20:13] 2025-10-10 18:19:18,670 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 14:20:13] 2025-10-10 18:19:18,671 | INFO     | update_server=False
[2025-10-10 14:20:13] 2025-10-10 18:19:18,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 14:20:13] 2025-10-10 18:19:18,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:20:13] 2025-10-10 18:19:18,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 14:20:13] 2025-10-10 18:19:18,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 14:20:13] 2025-10-10 18:19:19,125 | INFO     | all payload control threads have been joined
[2025-10-10 14:20:13] 2025-10-10 18:19:19,280 | INFO     | all data control threads have been joined
[2025-10-10 14:20:13] 2025-10-10 18:19:19,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:20:13] 2025-10-10 18:19:19,439 | INFO     | aborting loop
[2025-10-10 14:20:13] 2025-10-10 18:19:19,676 | INFO     | [job] retrieve thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:19,678 | INFO     | [job] queue monitor thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:19,723 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:19,796 | INFO     | all job control threads have been joined
[2025-10-10 14:20:13] 2025-10-10 18:19:20,045 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,131 | INFO     | [payload] control thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,287 | INFO     | [data] control thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,363 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,445 | INFO     | [job] job monitor thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,649 | INFO     | [payload] validate_post thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,689 | INFO     | [data] copytool_out thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,767 | INFO     | [data] copytool_in thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:20,802 | INFO     | [job] control thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:21,038 | INFO     | [job] validate thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:21,229 | INFO     | [payload] failed_post thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:22,678 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:28,946 | INFO     | job.realtimelogging is not enabled
[2025-10-10 14:20:13] 2025-10-10 18:19:29,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 14:20:13] 2025-10-10 18:19:49,744 | INFO     | PID=21445 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 14:20:13] 2025-10-10 18:19:49,745 | INFO     | .. there are 3 such processes running
[2025-10-10 14:20:13] 2025-10-10 18:19:49,745 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 14:20:13] 2025-10-10 18:19:49,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 14:20:13] 2025-10-10 18:19:49,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 14:20:13] 2025-10-10 18:20:06,545 | INFO     | [monitor] cgroup control has ended
[2025-10-10 14:20:13] 2025-10-10 18:20:07,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797840389952)>', '<ExcThread(monitor, started 139797410600704)>']
[2025-10-10 14:20:13] 2025-10-10 18:20:07,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 14:20:13] 2025-10-10 18:20:07,832 | INFO     | [monitor] control thread has ended
[2025-10-10 14:20:13] 2025-10-10 18:20:12,848 | INFO     | all workflow threads have been joined
[2025-10-10 14:20:13] 2025-10-10 18:20:12,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 14:20:13] 2025-10-10 18:20:12,849 | INFO     | traces error code: 0
[2025-10-10 14:20:13] 2025-10-10 18:20:12,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 14:20:13] 2025-10-10 18:20:12,976 [wrapper] ==== pilot stdout END ====
[2025-10-10 14:20:13] 2025-10-10 18:20:12,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 14:20:13] 2025-10-10 18:20:12,982 [wrapper] pilotpid: 21445
[2025-10-10 14:20:13] 2025-10-10 18:20:12,984 [wrapper] Pilot exit status: 0
[2025-10-10 14:20:13] 2025-10-10 18:20:12,994 [wrapper] pandaids: 6826698401
[2025-10-10 14:20:13] 2025-10-10 18:20:13,023 [wrapper] cleanup supervisor_pilot   533 21446
[2025-10-10 14:20:13] 2025-10-10 18:20:13,025 [wrapper] Test setup, not cleaning
[2025-10-10 14:20:13] 2025-10-10 18:20:13,028 [wrapper] apfmon messages muted
[2025-10-10 14:20:13] 2025-10-10 18:20:13,030 [wrapper] ==== wrapper stdout END ====
[2025-10-10 14:20:13] 2025-10-10 18:20:13,032 [wrapper] ==== wrapper stderr END ====
[2025-10-10 14:20:13]  *** Error codes and diagnostics ***
[2025-10-10 14:20:13]     "exeErrorCode": 0,
[2025-10-10 14:20:13]     "exeErrorDiag": "",
[2025-10-10 14:20:13]     "pilotErrorCode": 0,
[2025-10-10 14:20:13]     "pilotErrorDiag": "",
[2025-10-10 14:20:13]  *** Listing of results directory ***
[2025-10-10 14:20:13] total 411548
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas    552446 Oct  1 20:53 pilot3.tar.gz
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas      5112 Oct  1 21:20 queuedata.json
[2025-10-10 14:20:13] -rwx------ 1 boincer umatlas     36292 Oct  1 21:20 runpilot2-wrapper.sh
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas       100 Oct 10 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 14:20:13] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 10:23 run_atlas
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas       105 Oct 10 10:23 job.xml
[2025-10-10 14:20:13] -rw-r--r-- 2 boincer umatlas 220587640 Oct 10 10:23 EVNT.46373045._003112.pool.root.1
[2025-10-10 14:20:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:23 start_atlas.sh
[2025-10-10 14:20:13] drwxrwx--x 2 boincer umatlas      4096 Oct 10 10:23 shared
[2025-10-10 14:20:13] -rw-r--r-- 2 boincer umatlas    565604 Oct 10 10:23 input.tar.gz
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas         0 Oct 10 10:23 boinc_lockfile
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas      2535 Oct 10 10:23 pandaJob.out
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas    975525 Oct 10 10:23 agis_schedconf.cvmfs.json
[2025-10-10 14:20:13] drwx------ 4 boincer umatlas      4096 Oct 10 10:23 pilot3
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas      5953 Oct 10 14:10 init_data.xml
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas 192108535 Oct 10 14:18 HITS.46373048._090678.pool.root.1
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas       532 Oct 10 14:18 boinc_task_state.xml
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas      1055 Oct 10 14:19 memory_monitor_summary.json
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas   1560580 Oct 10 14:19 agis_ddmendpoints.agis.ALL.json
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas    450435 Oct 10 14:19 log.46373048._090678.job.log.tgz.1
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas      7858 Oct 10 14:19 heartbeat.json
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas        95 Oct 10 14:19 pilot_heartbeat.json
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 14:20 boinc_mmap_file
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas        29 Oct 10 14:20 wrapper_checkpoint.txt
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas      4893 Oct 10 14:20 pilotlog.txt
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas   1971731 Oct 10 14:20 log.46373048._090678.job.log.1
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas       357 Oct 10 14:20 output.list
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas       620 Oct 10 14:20 runtime_log
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas   2437120 Oct 10 14:20 result.tar.gz
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas      8704 Oct 10 14:20 runtime_log.err
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas       663 Oct 10 14:20 jFrLDmxANO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmISDNDm7zjUDn.diag
[2025-10-10 14:20:13] -rw-r--r-- 1 boincer umatlas     20908 Oct 10 14:20 stderr.txt
[2025-10-10 14:20:13] HITS file was successfully produced:
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas 192108535 Oct 10 14:18 shared/HITS.pool.root.1
[2025-10-10 14:20:13]  *** Contents of shared directory: ***
[2025-10-10 14:20:13] total 405984
[2025-10-10 14:20:13] -rw-r--r-- 2 boincer umatlas 220587640 Oct 10 10:23 ATLAS.root_0
[2025-10-10 14:20:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:23 start_atlas.sh
[2025-10-10 14:20:13] -rw-r--r-- 2 boincer umatlas    565604 Oct 10 10:23 input.tar.gz
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas 192108535 Oct 10 14:18 HITS.pool.root.1
[2025-10-10 14:20:13] -rw------- 1 boincer umatlas   2437120 Oct 10 14:20 result.tar.gz
14:20:14 (17759): run_atlas exited; CPU time 107079.343293
14:20:14 (17759): called boinc_finish(0)

</stderr_txt>
]]>

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