Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:25:07 (3492636): wrapper (7.7.26015): starting
12:25:07 (3492636): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 12:25:07] Arguments: --nthreads 9
[2025-10-10 12:25:07] Threads: 9
[2025-10-10 12:25:07] Checking for CVMFS
[2025-10-10 12:25:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:25:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:25:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:25:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:25:07] 2.13.2.0 929169 15951 203528 151555 2 65 30102884 32935936 19428 16776704 0 46561941 99.623 45719036 32621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 12:25:07] CVMFS is ok
[2025-10-10 12:25:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:25:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:25:07] Further information can be found at the LHC@home message board.
[2025-10-10 12:25:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:25:07] Checking for apptainer binary...
[2025-10-10 12:25:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:25:07] Running /usr/bin/apptainer --version
[2025-10-10 12:25:07] apptainer version 1.4.3-1.el9
[2025-10-10 12:25:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:25:07] c6-4-5-2.aglt2.org
[2025-10-10 12:25:07] apptainer works
[2025-10-10 12:25:07] Set ATHENA_PROC_NUMBER=9
[2025-10-10 12:25:07] Set ATHENA_CORE_NUMBER=9
[2025-10-10 12:25:07] Starting ATLAS job with PandaID=6837377234
[2025-10-10 12:25:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:09:41]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:09:41] 2025-10-10 19:08:39,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 15:09:41] 2025-10-10 19:08:39,322 | INFO     | fitting pss+swap vs Time
[2025-10-10 15:09:41] 2025-10-10 19:08:39,322 | INFO     | sum of square deviations: 1270100833.4937472
[2025-10-10 15:09:41] 2025-10-10 19:08:39,327 | INFO     | sum of deviations: -2250761870.6499863
[2025-10-10 15:09:41] 2025-10-10 19:08:39,327 | INFO     | mean x: 1760118389.55625
[2025-10-10 15:09:41] 2025-10-10 19:08:39,327 | INFO     | mean y: 2307544.85
[2025-10-10 15:09:41] 2025-10-10 19:08:39,327 | INFO     | -- intersect: 3121435770.398535
[2025-10-10 15:09:41] 2025-10-10 19:08:39,327 | INFO     | intersect: 3121435770.398535
[2025-10-10 15:09:41] 2025-10-10 19:08:39,328 | INFO     | chi2: 2.470092158495883
[2025-10-10 15:09:41] 2025-10-10 19:08:39,328 | INFO     | sum of square deviations: 1154715368.477419
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | sum of deviations: 9058120952.974195
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | mean x: 1760118237.0580645
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | mean y: 2322159.7806451614
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | -- intersect: -13804858655.548944
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | intersect: -13804858655.548944
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | chi2: 1.702854632647076
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | current chi2=1.702854632647076 (change=31.061089085680187 %)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,329 | INFO     | sum of square deviations: 1046539340.9600011
[2025-10-10 15:09:41] 2025-10-10 19:08:39,330 | INFO     | sum of deviations: 9605966926.879988
[2025-10-10 15:09:41] 2025-10-10 19:08:39,330 | INFO     | mean x: 1760118084.56
[2025-10-10 15:09:41] 2025-10-10 19:08:39,330 | INFO     | mean y: 2322932.18
[2025-10-10 15:09:41] 2025-10-10 19:08:39,330 | INFO     | -- intersect: -16153434855.364964
[2025-10-10 15:09:41] 2025-10-10 19:08:39,330 | INFO     | intersect: -16153434855.364964
[2025-10-10 15:09:41] 2025-10-10 19:08:39,335 | INFO     | chi2: 1.7038735507100737
[2025-10-10 15:09:41] 2025-10-10 19:08:39,335 | INFO     | current chi2=1.7038735507100737 (change=-0.059835880495207494 %)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,335 | INFO     | right removable region: 149
[2025-10-10 15:09:41] 2025-10-10 19:08:39,335 | INFO     | sum of square deviations: 1154709878.477419
[2025-10-10 15:09:41] 2025-10-10 19:08:39,336 | INFO     | sum of deviations: -27177947687.483868
[2025-10-10 15:09:41] 2025-10-10 19:08:39,336 | INFO     | mean x: 1760118542.0580645
[2025-10-10 15:09:41] 2025-10-10 19:08:39,336 | INFO     | mean y: 2340135.3870967743
[2025-10-10 15:09:41] 2025-10-10 19:08:39,336 | INFO     | -- intersect: 41429551031.77325
[2025-10-10 15:09:41] 2025-10-10 19:08:39,336 | INFO     | intersect: 41429551031.77325
[2025-10-10 15:09:41] 2025-10-10 19:08:39,337 | INFO     | chi2: 0.948783168713754
[2025-10-10 15:09:41] 2025-10-10 19:08:39,337 | INFO     | current chi2=0.948783168713754 (change=61.58915911495796 %)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,337 | INFO     | sum of square deviations: 1046528360.9600011
[2025-10-10 15:09:41] 2025-10-10 19:08:39,337 | INFO     | sum of deviations: -30580016848.159996
[2025-10-10 15:09:41] 2025-10-10 19:08:39,337 | INFO     | mean x: 1760118694.56
[2025-10-10 15:09:41] 2025-10-10 19:08:39,337 | INFO     | mean y: 2344829.5733333332
[2025-10-10 15:09:41] 2025-10-10 19:08:39,337 | INFO     | -- intersect: 51433783615.45768
[2025-10-10 15:09:41] 2025-10-10 19:08:39,338 | INFO     | intersect: 51433783615.45768
[2025-10-10 15:09:41] 2025-10-10 19:08:39,338 | INFO     | chi2: 0.86711344616165
[2025-10-10 15:09:41] 2025-10-10 19:08:39,338 | INFO     | current chi2=0.86711344616165 (change=8.60783846564458 %)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,338 | INFO     | left removable region: 20
[2025-10-10 15:09:41] 2025-10-10 19:08:39,338 | INFO     | sum of square deviations: 665656652.3720928
[2025-10-10 15:09:41] 2025-10-10 19:08:39,338 | INFO     | sum of deviations: -15161519893.697678
[2025-10-10 15:09:41] 2025-10-10 19:08:39,338 | INFO     | mean x: 1760118664.0697675
[2025-10-10 15:09:41] 2025-10-10 19:08:39,342 | INFO     | mean y: 2360071.7441860465
[2025-10-10 15:09:41] 2025-10-10 19:08:39,342 | INFO     | -- intersect: 40092208262.197205
[2025-10-10 15:09:41] 2025-10-10 19:08:39,342 | INFO     | intersect: 40092208262.197205
[2025-10-10 15:09:41] 2025-10-10 19:08:39,342 | INFO     | chi2: 0.07017869863003798
[2025-10-10 15:09:41] 2025-10-10 19:08:39,342 | INFO     | -- intersect: 40092208262.197205
[2025-10-10 15:09:41] 2025-10-10 19:08:39,342 | INFO     | current memory leak: -22.78 B/s (using 129 data points, chi2=0.07)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | could have reported an average CPU frequency of 2948 MHz (9 samples)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | ..............................
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . Timing measurements:
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . get job = 0 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . initial setup = 3 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . payload setup = 4 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . stage-in = 0 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . payload execution = 9737 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . stage-out = 2 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | . log creation = 0 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,343 | INFO     | ..............................
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | 
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | job summary report
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | --------------------------------------------------
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | PanDA job id: 6837377234
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | task id: 46676269
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | errors: (none)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | pilot state: finished 
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | transexitcode: 0
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | exeerrorcode: 0
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | exeerrordiag: 
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | exitcode: 0
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | exitmsg: OK
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | cpuconsumptiontime: 39794 s
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | nevents: 400
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | neventsw: 0
[2025-10-10 15:09:41] 2025-10-10 19:08:39,498 | INFO     | pid: 3504369
[2025-10-10 15:09:41] 2025-10-10 19:08:39,499 | INFO     | pgrp: 3504369
[2025-10-10 15:09:41] 2025-10-10 19:08:39,499 | INFO     | corecount: 9
[2025-10-10 15:09:41] 2025-10-10 19:08:39,499 | INFO     | event service: False
[2025-10-10 15:09:41] 2025-10-10 19:08:39,499 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 9746: 2377825, 9749: 2386823, 9753: 2386879, 9788: 2387265}
[2025-10-10 15:09:41] 2025-10-10 19:08:39,499 | INFO     | --------------------------------------------------
[2025-10-10 15:09:41] 2025-10-10 19:08:39,499 | INFO     | 
[2025-10-10 15:09:41] 2025-10-10 19:08:39,499 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 15:09:41] 2025-10-10 19:08:39,568 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,568 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,568 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,568 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,568 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | job 6837377234 has completed (purged errors)
[2025-10-10 15:09:41] 2025-10-10 19:08:39,569 | INFO     | overall cleanup function is called
[2025-10-10 15:09:41] 2025-10-10 19:08:40,591 | INFO     | --- collectZombieJob: --- 10, [3504369]
[2025-10-10 15:09:41] 2025-10-10 19:08:40,591 | INFO     | zombie collector waiting for pid 3504369
[2025-10-10 15:09:41] 2025-10-10 19:08:40,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:09:41] 2025-10-10 19:08:40,591 | INFO     | collected zombie processes
[2025-10-10 15:09:41] 2025-10-10 19:08:40,591 | INFO     | will attempt to kill all subprocesses of pid=3504369
[2025-10-10 15:09:41] 2025-10-10 19:08:41,453 | INFO     | process IDs to be killed: [3504369] (in reverse order)
[2025-10-10 15:09:41] 2025-10-10 19:08:42,357 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:09:41] 2025-10-10 19:08:42,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:09:41] 2025-10-10 19:08:42,431 | INFO     | did not find any defunct processes belonging to 3504369
[2025-10-10 15:09:41] 2025-10-10 19:08:42,467 | INFO     | did not find any defunct processes belonging to 3504369
[2025-10-10 15:09:41] 2025-10-10 19:08:42,467 | INFO     | ready for new job
[2025-10-10 15:09:41] 2025-10-10 19:08:42,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:09:41] 2025-10-10 19:08:42,469 | INFO     | ***************************************
[2025-10-10 15:09:41] 2025-10-10 19:08:42,469 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 15:09:41] 2025-10-10 19:08:42,469 | INFO     | ***************************************
[2025-10-10 15:09:41] 2025-10-10 19:08:42,469 | INFO     | 
[2025-10-10 15:09:41] 2025-10-10 19:08:42,488 | INFO     | architecture information:
[2025-10-10 15:09:41] 2025-10-10 19:08:42,496 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:09:41] 2025-10-10 19:08:42,551 | INFO     | cat /etc/os-release:
[2025-10-10 15:09:41] NAME="CentOS Linux"
[2025-10-10 15:09:41] VERSION="7 (Core)"
[2025-10-10 15:09:41] ID="centos"
[2025-10-10 15:09:41] ID_LIKE="rhel fedora"
[2025-10-10 15:09:41] VERSION_ID="7"
[2025-10-10 15:09:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:09:41] ANSI_COLOR="0;31"
[2025-10-10 15:09:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:09:41] HOME_URL="https://www.centos.org/"
[2025-10-10 15:09:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:09:41] 
[2025-10-10 15:09:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:09:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:09:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:09:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:09:41] 
[2025-10-10 15:09:41] 2025-10-10 19:08:42,552 | INFO     | ***************************************
[2025-10-10 15:09:41] 2025-10-10 19:08:43,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 15:09:41] 2025-10-10 19:08:43,099 | INFO     | sufficient remaining disk space (74874617856 B)
[2025-10-10 15:09:41] 2025-10-10 19:08:43,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:09:41] 2025-10-10 19:08:43,099 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:09:41] 2025-10-10 19:08:43,099 | INFO     | update_server=False
[2025-10-10 15:09:41] 2025-10-10 19:08:43,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:09:41] 2025-10-10 19:08:43,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:09:41] 2025-10-10 19:08:43,493 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 15:09:41] 2025-10-10 19:08:43,493 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 15:09:41] 2025-10-10 19:08:43,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:09:41] 2025-10-10 19:08:43,493 | INFO     | will abort loop
[2025-10-10 15:09:41] 2025-10-10 19:08:43,561 | INFO     | all data control threads have been joined
[2025-10-10 15:09:41] 2025-10-10 19:08:43,978 | INFO     | all payload control threads have been joined
[2025-10-10 15:09:41] 2025-10-10 19:08:44,106 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:44,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:09:41] 2025-10-10 19:08:44,463 | INFO     | all job control threads have been joined
[2025-10-10 15:09:41] 2025-10-10 19:08:44,488 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:44,488 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:44,499 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:44,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:09:41] 2025-10-10 19:08:44,545 | INFO     | [job] validate thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:44,567 | INFO     | [data] control thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:44,984 | INFO     | [payload] control thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:45,105 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:45,190 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:45,210 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:45,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:45,469 | INFO     | [job] control thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:45,529 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:45,540 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:46,294 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:08:47,122 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:09:41] 2025-10-10 19:09:12,175 | INFO     | PID=3496314 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 15:09:41] 2025-10-10 19:09:12,176 | INFO     | .. there are 25 such processes running
[2025-10-10 15:09:41] 2025-10-10 19:09:12,176 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:09:41] 2025-10-10 19:09:12,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:09:41] 2025-10-10 19:09:12,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:09:41] 2025-10-10 19:09:33,881 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:09:41] 2025-10-10 19:09:34,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498964698944)>', '<ExcThread(monitor, started 140498605942528)>']
[2025-10-10 15:09:41] 2025-10-10 19:09:34,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:09:41] 2025-10-10 19:09:34,352 | INFO     | [monitor] control thread has ended
[2025-10-10 15:09:41] 2025-10-10 19:09:39,038 | INFO     | all workflow threads have been joined
[2025-10-10 15:09:41] 2025-10-10 19:09:39,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:09:41] 2025-10-10 19:09:39,038 | INFO     | traces error code: 0
[2025-10-10 15:09:41] 2025-10-10 19:09:39,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:09:41] 2025-10-10 19:09:39,740 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:09:41] 2025-10-10 19:09:39,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:09:41] 2025-10-10 19:09:39,794 [wrapper] pilotpid: 3496314
[2025-10-10 15:09:41] 2025-10-10 19:09:39,831 [wrapper] Pilot exit status: 0
[2025-10-10 15:09:41] 2025-10-10 19:09:39,979 [wrapper] pandaids: 6837377234
[2025-10-10 15:09:41] 2025-10-10 19:09:40,747 [wrapper] cleanup supervisor_pilot 4130064 3496315
[2025-10-10 15:09:41] 2025-10-10 19:09:40,760 [wrapper] Test setup, not cleaning
[2025-10-10 15:09:41] 2025-10-10 19:09:40,797 [wrapper] apfmon messages muted
[2025-10-10 15:09:41] 2025-10-10 19:09:40,811 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:09:41] 2025-10-10 19:09:40,864 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:09:41]  *** Error codes and diagnostics ***
[2025-10-10 15:09:42]     "exeErrorCode": 0,
[2025-10-10 15:09:42]     "exeErrorDiag": "",
[2025-10-10 15:09:42]     "pilotErrorCode": 0,
[2025-10-10 15:09:42]     "pilotErrorDiag": "",
[2025-10-10 15:09:42]  *** Listing of results directory ***
[2025-10-10 15:09:42] total 411996
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 20:28 pilot3.tar.gz
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 20:36 queuedata.json
[2025-10-10 15:09:42] -rwx------. 1 boincer umatlas     36292 Oct  9 20:37 runpilot2-wrapper.sh
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas       100 Oct 10 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:09:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 12:25 run_atlas
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas       105 Oct 10 12:25 job.xml
[2025-10-10 15:09:42] -rw-r--r--. 2 boincer umatlas 220401515 Oct 10 12:25 EVNT.46676267._001059.pool.root.1
[2025-10-10 15:09:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:25 start_atlas.sh
[2025-10-10 15:09:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 12:25 shared
[2025-10-10 15:09:42] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 12:25 input.tar.gz
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas         0 Oct 10 12:25 boinc_lockfile
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 12:25 pandaJob.out
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas    975525 Oct 10 12:25 agis_schedconf.cvmfs.json
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas   1560580 Oct 10 12:25 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:09:42] drwx------. 5 boincer umatlas      4096 Oct 10 12:25 pilot3
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas 194052940 Oct 10 15:06 HITS.46676269._028970.pool.root.1
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas       529 Oct 10 15:06 boinc_task_state.xml
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas      1067 Oct 10 15:07 memory_monitor_summary.json
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas    410725 Oct 10 15:07 log.46676269._028970.job.log.tgz.1
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas      7845 Oct 10 15:08 heartbeat.json
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas        95 Oct 10 15:08 pilot_heartbeat.json
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas      6855 Oct 10 15:09 init_data.xml
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas      5010 Oct 10 15:09 pilotlog.txt
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 15:09 boinc_mmap_file
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas        27 Oct 10 15:09 wrapper_checkpoint.txt
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas   1348439 Oct 10 15:09 log.46676269._028970.job.log.1
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas       357 Oct 10 15:09 output.list
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas       620 Oct 10 15:09 runtime_log
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas   1781760 Oct 10 15:09 result.tar.gz
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas       656 Oct 10 15:09 vIjNDmXJGR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfmbNDmFzanon.diag
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas      8703 Oct 10 15:09 runtime_log.err
[2025-10-10 15:09:42] -rw-r--r--. 1 boincer umatlas     20971 Oct 10 15:09 stderr.txt
[2025-10-10 15:09:42] HITS file was successfully produced:
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas 194052940 Oct 10 15:06 shared/HITS.pool.root.1
[2025-10-10 15:09:42]  *** Contents of shared directory: ***
[2025-10-10 15:09:42] total 407068
[2025-10-10 15:09:42] -rw-r--r--. 2 boincer umatlas 220401515 Oct 10 12:25 ATLAS.root_0
[2025-10-10 15:09:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:25 start_atlas.sh
[2025-10-10 15:09:42] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 12:25 input.tar.gz
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas 194052940 Oct 10 15:06 HITS.pool.root.1
[2025-10-10 15:09:42] -rw-------. 1 boincer umatlas   1781760 Oct 10 15:09 result.tar.gz
15:09:43 (3492636): run_atlas exited; CPU time 40065.863435
15:09:43 (3492636): called boinc_finish(0)

</stderr_txt>
]]>

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