Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:16:26 (31151): wrapper (7.7.26015): starting
10:16:26 (31151): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 10:16:26] Arguments: --nthreads 8
[2025-10-10 10:16:26] Threads: 8
[2025-10-10 10:16:26] Checking for CVMFS
[2025-10-10 10:16:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:16:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:16:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:16:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:16:26] 2.11.2.0 2892 203077 80828 151548 3 56 19848217 20275200 1 130560 1 72238838 99.977 10608382 9891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 10:16:26] CVMFS is ok
[2025-10-10 10:16:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:16:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:16:26] Further information can be found at the LHC@home message board.
[2025-10-10 10:16:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:16:26] Checking for apptainer binary...
[2025-10-10 10:16:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:16:26] Running /usr/bin/apptainer --version
[2025-10-10 10:16:26] apptainer version 1.3.2-1.el7
[2025-10-10 10:16:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:16:28] c-204-27.aglt2.org
[2025-10-10 10:16:28] apptainer works
[2025-10-10 10:16:28] Set ATHENA_PROC_NUMBER=8
[2025-10-10 10:16:28] Set ATHENA_CORE_NUMBER=8
[2025-10-10 10:16:28] Starting ATLAS job with PandaID=6837397450
[2025-10-10 10:16:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:27:21]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:27:21] 2025-10-10 16:26:48,492 | INFO     | intersect: 13784966331.94087
[2025-10-10 12:27:21] 2025-10-10 16:26:48,492 | INFO     | chi2: 2.288718647117839
[2025-10-10 12:27:21] 2025-10-10 16:26:48,493 | INFO     | sum of square deviations: 576985702.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,493 | INFO     | sum of deviations: 3401705504.0000014
[2025-10-10 12:27:21] 2025-10-10 16:26:48,493 | INFO     | mean x: 1760109559.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,494 | INFO     | mean y: 2512912.487804878
[2025-10-10 12:27:21] 2025-10-10 16:26:48,494 | INFO     | -- intersect: -10374476246.410479
[2025-10-10 12:27:21] 2025-10-10 16:26:48,494 | INFO     | intersect: -10374476246.410479
[2025-10-10 12:27:21] 2025-10-10 16:26:48,494 | INFO     | chi2: 1.5257085873974028
[2025-10-10 12:27:21] 2025-10-10 16:26:48,494 | INFO     | current chi2=1.5257085873974028 (change=33.33787054521915 %)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,495 | INFO     | sum of square deviations: 509440249.5
[2025-10-10 12:27:21] 2025-10-10 16:26:48,496 | INFO     | sum of deviations: 3291585803.000004
[2025-10-10 12:27:21] 2025-10-10 16:26:48,496 | INFO     | mean x: 1760109406.5
[2025-10-10 12:27:21] 2025-10-10 16:26:48,496 | INFO     | sufficient remaining disk space (18536726528 B)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,496 | INFO     | mean y: 2512663.881355932
[2025-10-10 12:27:21] 2025-10-10 16:26:48,497 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,497 | INFO     | -- intersect: -11369873282.946276
[2025-10-10 12:27:21] 2025-10-10 16:26:48,497 | INFO     | intersect: -11369873282.946276
[2025-10-10 12:27:21] 2025-10-10 16:26:48,497 | INFO     | chi2: 1.527013148581011
[2025-10-10 12:27:21] 2025-10-10 16:26:48,498 | INFO     | current chi2=1.527013148581011 (change=-0.08550526584067926 %)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,498 | INFO     | right removable region: 117
[2025-10-10 12:27:21] 2025-10-10 16:26:48,498 | INFO     | sum of square deviations: 576985702.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,499 | INFO     | sum of deviations: -23115887841.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,499 | INFO     | mean x: 1760109864.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,499 | INFO     | mean y: 2532601.674796748
[2025-10-10 12:27:21] 2025-10-10 16:26:48,499 | INFO     | -- intersect: 70518148609.19548
[2025-10-10 12:27:21] 2025-10-10 16:26:48,499 | INFO     | intersect: 70518148609.19548
[2025-10-10 12:27:21] 2025-10-10 16:26:48,500 | INFO     | chi2: 0.9258865661361714
[2025-10-10 12:27:21] 2025-10-10 16:26:48,500 | INFO     | current chi2=0.9258865661361714 (change=59.54563627547094 %)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,500 | INFO     | sum of square deviations: 509440249.5
[2025-10-10 12:27:21] 2025-10-10 16:26:48,501 | INFO     | sum of deviations: -20807106161.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,501 | INFO     | mean x: 1760110016.5
[2025-10-10 12:27:21] 2025-10-10 16:26:48,501 | INFO     | mean y: 2527292.372881356
[2025-10-10 12:27:21] 2025-10-10 16:26:48,501 | INFO     | -- intersect: 71890832160.90086
[2025-10-10 12:27:21] 2025-10-10 16:26:48,501 | INFO     | intersect: 71890832160.90086
[2025-10-10 12:27:21] 2025-10-10 16:26:48,502 | INFO     | chi2: 0.9161824792146436
[2025-10-10 12:27:21] 2025-10-10 16:26:48,502 | INFO     | current chi2=0.9161824792146436 (change=1.0480859401626317 %)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,502 | INFO     | left removable region: 20
[2025-10-10 12:27:21] 2025-10-10 16:26:48,502 | INFO     | sum of square deviations: 282974608.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,503 | INFO     | sum of deviations: -4380791738.000003
[2025-10-10 12:27:21] 2025-10-10 16:26:48,503 | INFO     | mean x: 1760109986.0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,503 | INFO     | mean y: 2525443.6597938146
[2025-10-10 12:27:21] 2025-10-10 16:26:48,503 | INFO     | -- intersect: 27251172730.910744
[2025-10-10 12:27:21] 2025-10-10 16:26:48,503 | INFO     | intersect: 27251172730.910744
[2025-10-10 12:27:21] 2025-10-10 16:26:48,504 | INFO     | chi2: 0.07151784756175326
[2025-10-10 12:27:21] 2025-10-10 16:26:48,504 | INFO     | -- intersect: 27251172730.910744
[2025-10-10 12:27:21] 2025-10-10 16:26:48,504 | INFO     | current memory leak: -15.48 B/s (using 97 data points, chi2=0.07)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,504 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,505 | INFO     | ..............................
[2025-10-10 12:27:21] 2025-10-10 16:26:48,505 | INFO     | . Timing measurements:
[2025-10-10 12:27:21] 2025-10-10 16:26:48,505 | INFO     | . get job = 0 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,505 | INFO     | . initial setup = 3 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,505 | INFO     | . payload setup = 8 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,505 | INFO     | . stage-in = 0 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,506 | INFO     | . payload execution = 7769 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,506 | INFO     | . stage-out = 0 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,506 | INFO     | . log creation = 0 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,506 | INFO     | ..............................
[2025-10-10 12:27:21] 2025-10-10 16:26:48,580 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6837397450: 3661796 B (within 2537553920 B limit)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,603 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6837397450/HITS.46676269._030530.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,603 | INFO     | 
[2025-10-10 12:27:21] 2025-10-10 16:26:48,603 | INFO     | total size of present files: 0 B (workdir size: 3661796 B)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,603 | INFO     | job summary report
[2025-10-10 12:27:21] 2025-10-10 16:26:48,604 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6837397450/HITS.46676269._030530.pool.root.1 since it does not exist
[2025-10-10 12:27:21] 2025-10-10 16:26:48,604 | INFO     | --------------------------------------------------
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | PanDA job id: 6837397450
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | task id: 46676269
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | errors: (none)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | pilot state: finished 
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | transexitcode: 0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | exeerrorcode: 0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,605 | INFO     | exeerrordiag: 
[2025-10-10 12:27:21] 2025-10-10 16:26:48,606 | INFO     | exitcode: 0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,606 | INFO     | exitmsg: OK
[2025-10-10 12:27:21] 2025-10-10 16:26:48,606 | INFO     | cpuconsumptiontime: 57442 s
[2025-10-10 12:27:21] 2025-10-10 16:26:48,606 | INFO     | nevents: 400
[2025-10-10 12:27:21] 2025-10-10 16:26:48,606 | INFO     | neventsw: 0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,606 | INFO     | pid: 10107
[2025-10-10 12:27:21] 2025-10-10 16:26:48,606 | INFO     | pgrp: 10107
[2025-10-10 12:27:21] 2025-10-10 16:26:48,607 | INFO     | corecount: 8
[2025-10-10 12:27:21] 2025-10-10 16:26:48,607 | INFO     | event service: False
[2025-10-10 12:27:21] 2025-10-10 16:26:48,607 | INFO     | sizes: {0: 2348806, 6: 2349068, 11: 2349096, 7777: 2376698, 7778: 2385696, 7779: 2385752, 7785: 2386074}
[2025-10-10 12:27:21] 2025-10-10 16:26:48,607 | INFO     | --------------------------------------------------
[2025-10-10 12:27:21] 2025-10-10 16:26:48,607 | INFO     | 
[2025-10-10 12:27:21] 2025-10-10 16:26:48,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 12:27:21] 2025-10-10 16:26:48,635 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,635 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,635 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,636 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,639 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,639 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:27:21] 2025-10-10 16:26:48,639 | INFO     | job 6837397450 has completed (purged errors)
[2025-10-10 12:27:21] 2025-10-10 16:26:48,640 | INFO     | overall cleanup function is called
[2025-10-10 12:27:21] 2025-10-10 16:26:48,711 | INFO     | number of running child processes to parent process 10107: 1
[2025-10-10 12:27:21] 2025-10-10 16:26:48,711 | INFO     | maximum number of monitored processes: 6
[2025-10-10 12:27:21] 2025-10-10 16:26:48,716 | INFO     | aborting job monitoring since job object (job id=6837397450) has expired
[2025-10-10 12:27:21] 2025-10-10 16:26:49,649 | INFO     | --- collectZombieJob: --- 10, [10107]
[2025-10-10 12:27:21] 2025-10-10 16:26:49,649 | INFO     | zombie collector waiting for pid 10107
[2025-10-10 12:27:21] 2025-10-10 16:26:49,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:27:21] 2025-10-10 16:26:49,650 | INFO     | collected zombie processes
[2025-10-10 12:27:21] 2025-10-10 16:26:49,650 | INFO     | will attempt to kill all subprocesses of pid=10107
[2025-10-10 12:27:21] 2025-10-10 16:26:49,741 | INFO     | process IDs to be killed: [10107] (in reverse order)
[2025-10-10 12:27:21] 2025-10-10 16:26:49,802 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:27:21] 2025-10-10 16:26:49,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:27:21] 2025-10-10 16:26:49,807 | INFO     | did not find any defunct processes belonging to 10107
[2025-10-10 12:27:21] 2025-10-10 16:26:49,809 | INFO     | did not find any defunct processes belonging to 10107
[2025-10-10 12:27:21] 2025-10-10 16:26:49,810 | INFO     | ready for new job
[2025-10-10 12:27:21] 2025-10-10 16:26:49,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:27:21] 2025-10-10 16:26:49,812 | INFO     | ***************************************
[2025-10-10 12:27:21] 2025-10-10 16:26:49,812 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:27:21] 2025-10-10 16:26:49,812 | INFO     | ***************************************
[2025-10-10 12:27:21] 2025-10-10 16:26:49,812 | INFO     | 
[2025-10-10 12:27:21] 2025-10-10 16:26:49,813 | INFO     | architecture information:
[2025-10-10 12:27:21] 2025-10-10 16:26:49,814 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:27:21] 2025-10-10 16:26:49,834 | INFO     | cat /etc/os-release:
[2025-10-10 12:27:21] NAME="CentOS Linux"
[2025-10-10 12:27:21] VERSION="7 (Core)"
[2025-10-10 12:27:21] ID="centos"
[2025-10-10 12:27:21] ID_LIKE="rhel fedora"
[2025-10-10 12:27:21] VERSION_ID="7"
[2025-10-10 12:27:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:27:21] ANSI_COLOR="0;31"
[2025-10-10 12:27:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:27:21] HOME_URL="https://www.centos.org/"
[2025-10-10 12:27:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:27:21] 
[2025-10-10 12:27:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:27:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:27:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:27:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:27:21] 
[2025-10-10 12:27:21] 2025-10-10 16:26:49,835 | INFO     | ***************************************
[2025-10-10 12:27:21] 2025-10-10 16:26:50,338 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 12:27:21] 2025-10-10 16:26:50,359 | INFO     | sufficient remaining disk space (18540920832 B)
[2025-10-10 12:27:21] 2025-10-10 16:26:50,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:27:21] 2025-10-10 16:26:50,360 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:27:21] 2025-10-10 16:26:50,360 | INFO     | update_server=False
[2025-10-10 12:27:21] 2025-10-10 16:26:50,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:27:21] 2025-10-10 16:26:50,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:27:21] 2025-10-10 16:26:50,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:27:21] 2025-10-10 16:26:50,361 | INFO     | aborting loop
[2025-10-10 12:27:21] 2025-10-10 16:26:50,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:27:21] 2025-10-10 16:26:50,739 | INFO     | all payload control threads have been joined
[2025-10-10 12:27:21] 2025-10-10 16:26:50,928 | INFO     | all data control threads have been joined
[2025-10-10 12:27:21] 2025-10-10 16:26:51,331 | INFO     | all job control threads have been joined
[2025-10-10 12:27:21] 2025-10-10 16:26:51,365 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:51,367 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:51,367 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:51,732 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:51,745 | INFO     | [payload] control thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:51,934 | INFO     | [data] control thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:51,999 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:52,337 | INFO     | [job] control thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:52,373 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:52,423 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:52,502 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:52,607 | INFO     | [job] validate thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:52,724 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:52,741 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:53,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:27:21] 2025-10-10 16:26:57,210 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:26:58,501 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:27:21] 2025-10-10 16:27:00,989 | INFO     | job.realtimelogging is not enabled
[2025-10-10 12:27:21] 2025-10-10 16:27:01,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:27:21] 2025-10-10 16:27:02,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638230210368)>', '<ExcThread(monitor, started 140637294819072)>']
[2025-10-10 12:27:21] 2025-10-10 16:27:07,562 | INFO     | all workflow threads have been joined
[2025-10-10 12:27:21] 2025-10-10 16:27:07,563 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:27:21] 2025-10-10 16:27:07,567 | INFO     | traces error code: 0
[2025-10-10 12:27:21] 2025-10-10 16:27:07,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:27:21] 2025-10-10 16:27:20,846 | INFO     | PID=2777 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-10 12:27:21] 2025-10-10 16:27:20,846 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:27:21] 2025-10-10 16:27:20,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:27:21] 2025-10-10 16:27:20,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:27:21] 2025-10-10 16:27:20,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:27:21] 2025-10-10 16:27:20,847 | INFO     | [monitor] control thread has ended
[2025-10-10 12:27:21] 2025-10-10 16:27:20,958 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:27:21] 2025-10-10 16:27:20,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:27:21] 2025-10-10 16:27:20,968 [wrapper] pilotpid: 2777
[2025-10-10 12:27:21] 2025-10-10 16:27:20,973 [wrapper] Pilot exit status: 0
[2025-10-10 12:27:21] 2025-10-10 16:27:20,993 [wrapper] pandaids: 6837397450
[2025-10-10 12:27:21] 2025-10-10 16:27:21,042 [wrapper] cleanup supervisor_pilot 12772 2778
[2025-10-10 12:27:21] 2025-10-10 16:27:21,047 [wrapper] Test setup, not cleaning
[2025-10-10 12:27:21] 2025-10-10 16:27:21,052 [wrapper] apfmon messages muted
[2025-10-10 12:27:21] 2025-10-10 16:27:21,057 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:27:21] 2025-10-10 16:27:21,063 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:27:21]  *** Error codes and diagnostics ***
[2025-10-10 12:27:21]     "exeErrorCode": 0,
[2025-10-10 12:27:21]     "exeErrorDiag": "",
[2025-10-10 12:27:21]     "pilotErrorCode": 0,
[2025-10-10 12:27:21]     "pilotErrorDiag": "",
[2025-10-10 12:27:21]  *** Listing of results directory ***
[2025-10-10 12:27:21] total 420788
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 22:00 pilot3.tar.gz
[2025-10-10 12:27:21] -rwx------ 1 boincer umatlas     36292 Oct  9 22:18 runpilot2-wrapper.sh
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 22:18 queuedata.json
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas       100 Oct 10 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:27:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 10:16 run_atlas
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas       105 Oct 10 10:16 job.xml
[2025-10-10 12:27:21] -rw-r--r-- 2 boincer umatlas 224285180 Oct 10 10:16 EVNT.46676267._001245.pool.root.1
[2025-10-10 12:27:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:16 start_atlas.sh
[2025-10-10 12:27:21] drwxrwx--x 2 boincer umatlas      4096 Oct 10 10:16 shared
[2025-10-10 12:27:21] -rw-r--r-- 2 boincer umatlas    569673 Oct 10 10:16 input.tar.gz
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas         0 Oct 10 10:16 boinc_lockfile
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas      2549 Oct 10 10:16 pandaJob.out
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas    975525 Oct 10 10:16 agis_schedconf.cvmfs.json
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas   1560580 Oct 10 10:16 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:27:21] drwx------ 5 boincer umatlas      4096 Oct 10 10:16 pilot3
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas      5909 Oct 10 12:21 init_data.xml
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas 199755320 Oct 10 12:26 HITS.46676269._030530.pool.root.1
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas       529 Oct 10 12:26 boinc_task_state.xml
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas        95 Oct 10 12:26 pilot_heartbeat.json
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas      1051 Oct 10 12:26 memory_monitor_summary.json
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas    375743 Oct 10 12:26 log.46676269._030530.job.log.tgz.1
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas      7846 Oct 10 12:26 heartbeat.json
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 12:27 boinc_mmap_file
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas        27 Oct 10 12:27 wrapper_checkpoint.txt
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas       744 Oct 10 12:27 pilotlog.txt
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas   1095331 Oct 10 12:27 log.46676269._030530.job.log.1
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas       357 Oct 10 12:27 output.list
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas       620 Oct 10 12:27 runtime_log
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas   1495040 Oct 10 12:27 result.tar.gz
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 12:27 runtime_log.err
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas       660 Oct 10 12:27 ELKMDmysHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg2bNDmy4IwPm.diag
[2025-10-10 12:27:21] -rw-r--r-- 1 boincer umatlas     21305 Oct 10 12:27 stderr.txt
[2025-10-10 12:27:21] HITS file was successfully produced:
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas 199755320 Oct 10 12:26 shared/HITS.pool.root.1
[2025-10-10 12:27:21]  *** Contents of shared directory: ***
[2025-10-10 12:27:21] total 416148
[2025-10-10 12:27:21] -rw-r--r-- 2 boincer umatlas 224285180 Oct 10 10:16 ATLAS.root_0
[2025-10-10 12:27:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 10:16 start_atlas.sh
[2025-10-10 12:27:21] -rw-r--r-- 2 boincer umatlas    569673 Oct 10 10:16 input.tar.gz
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas 199755320 Oct 10 12:26 HITS.pool.root.1
[2025-10-10 12:27:21] -rw------- 1 boincer umatlas   1495040 Oct 10 12:27 result.tar.gz
12:27:22 (31151): run_atlas exited; CPU time 57389.237148
12:27:22 (31151): called boinc_finish(0)

</stderr_txt>
]]>

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