Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
14:56:15 (1954217): wrapper (7.7.26015): starting
14:56:15 (1954217): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 14:56:15] Arguments: --nthreads 12
[2025-10-10 14:56:15] Threads: 12
[2025-10-10 14:56:15] Checking for CVMFS
[2025-10-10 14:56:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:56:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:56:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:56:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:56:15] 2.11.0.0 3299214 330 75348 151550 3 188 4882323 6144000 12446 130560 0 6633086 100.000 12190 241 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-10 14:56:15] CVMFS is ok
[2025-10-10 14:56:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:56:15] Checking for apptainer binary...
[2025-10-10 14:56:15] apptainer is not installed, using version from CVMFS
[2025-10-10 14:56:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:56:15] radiat0r
[2025-10-10 14:56:15] apptainer works
[2025-10-10 14:56:15] Set ATHENA_PROC_NUMBER=12
[2025-10-10 14:56:15] Set ATHENA_CORE_NUMBER=12
[2025-10-10 14:56:15] Starting ATLAS job with PandaID=6837401820
[2025-10-10 14:56:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:50:46]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:50:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 15:50:46]  replicas=None
[2025-10-10 15:50:46]  scope=mc23_13p6TeV
[2025-10-10 15:50:46]  status=None
[2025-10-10 15:50:46]  status_code=0
[2025-10-10 15:50:46]  storage_token=
[2025-10-10 15:50:46]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6837401820/log.46676269._032449.job.log.tgz.1
[2025-10-10 15:50:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/5d/log.46676269._032449.job.log.tgz.1
[2025-10-10 15:50:46]  workdir=None
[2025-10-10 15:50:46] ]
[2025-10-10 15:50:46] 2025-10-10 15:50:07,057 | INFO     | transferring file log.46676269._032449.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6837401820/log.46676269._032449.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-10 15:50:46] 2025-10-10 15:50:07,058 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6837401820/log.46676269._032449.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._032449.j
[2025-10-10 15:50:46] 2025-10-10 15:50:07,080 | INFO     | adding to output.list: log.46676269._032449.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/5d/log.46676269._032449.job.log.tg
[2025-10-10 15:50:46] 2025-10-10 15:50:07,081 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 15:50:46] 2025-10-10 15:50:07,081 | INFO     | summary of transferred files:
[2025-10-10 15:50:46] 2025-10-10 15:50:07,081 | INFO     |  -- lfn=log.46676269._032449.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 15:50:46] 2025-10-10 15:50:07,081 | INFO     | stage-out finished correctly
[2025-10-10 15:50:46] 2025-10-10 15:50:08,564 | INFO     | time since job start (3222s) is within the limit (172800.0s)
[2025-10-10 15:50:46] 2025-10-10 15:50:08,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 15:50:46] 2025-10-10 15:50:09,639 | INFO     | job 6837401820 has state=finished
[2025-10-10 15:50:46] 2025-10-10 15:50:09,639 | INFO     | preparing for final server update for job 6837401820 in state='finished'
[2025-10-10 15:50:46] 2025-10-10 15:50:09,640 | INFO     | this job has now completed (state=finished)
[2025-10-10 15:50:46] 2025-10-10 15:50:09,640 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 15:50:46] 2025-10-10 15:50:09,641 | INFO     | log transfer has been attempted: DONE
[2025-10-10 15:50:46] 2025-10-10 15:50:09,641 | INFO     | job 6837401820 has finished - writing final server update
[2025-10-10 15:50:46] 2025-10-10 15:50:09,641 | INFO     | total number of processed events: 400 (read)
[2025-10-10 15:50:46] 2025-10-10 15:50:09,642 | INFO     | executing command: lscpu
[2025-10-10 15:50:46] 2025-10-10 15:50:09,777 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 15:50:46] 2025-10-10 15:50:10,044 | WARNING  | process 1999588 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 15:50:46] 2025-10-10 15:50:10,045 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6837401820/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:50:46] 2025-10-10 15:50:10,502 | INFO     | number of running child processes to parent process 1999588: 1
[2025-10-10 15:50:46] 2025-10-10 15:50:10,502 | INFO     | maximum number of monitored processes: 6
[2025-10-10 15:50:46] 2025-10-10 15:50:10,567 | INFO     | time since job start (3224s) is within the limit (172800.0s)
[2025-10-10 15:50:46] 2025-10-10 15:50:12,570 | INFO     | time since job start (3226s) is within the limit (172800.0s)
[2025-10-10 15:50:46] 2025-10-10 15:50:13,005 | INFO     | monitor loop #223: job 0:6837401820 is in state 'finished'
[2025-10-10 15:50:46] 2025-10-10 15:50:13,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:50:46] 2025-10-10 15:50:14,253 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 15:50:46] 2025-10-10 15:50:14,300 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2235.3700742187484
[2025-10-10 15:50:46] 2025-10-10 15:50:14,365 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6837401820/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:50:46] 2025-10-10 15:50:14,366 | INFO     | extracted standard info from prmon json
[2025-10-10 15:50:46] 2025-10-10 15:50:14,366 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 15:50:46] 2025-10-10 15:50:14,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 15:50:46] 2025-10-10 15:50:14,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 15:50:46] 2025-10-10 15:50:14,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 15:50:46] 2025-10-10 15:50:14,367 | INFO     | fitting pss+swap vs Time
[2025-10-10 15:50:46] 2025-10-10 15:50:14,367 | INFO     | sum of square deviations: 30168007.5
[2025-10-10 15:50:46] 2025-10-10 15:50:14,367 | INFO     | sum of deviations: 52171134.500000015
[2025-10-10 15:50:46] 2025-10-10 15:50:14,367 | INFO     | mean x: 1760109891.5
[2025-10-10 15:50:46] 2025-10-10 15:50:14,367 | INFO     | mean y: 2663345.1086956523
[2025-10-10 15:50:46] 2025-10-10 15:50:14,367 | INFO     | -- intersect: -3041187989.2635508
[2025-10-10 15:50:46] 2025-10-10 15:50:14,367 | INFO     | intersect: -3041187989.2635508
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | chi2: 0.0013064210042170506
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | -- intersect: -3041187989.2635508
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | current memory leak: 1.73 B/s (using 46 data points, chi2=0.00)
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | could have reported an average CPU frequency of 2314 MHz (5 samples)
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | ..............................
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . Timing measurements:
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . get job = 0 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . initial setup = 1 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . payload setup = 6 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . stage-in = 0 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . payload execution = 3193 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . stage-out = 0 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | . log creation = 0 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,368 | INFO     | ..............................
[2025-10-10 15:50:46] 2025-10-10 15:50:14,494 | INFO     | 
[2025-10-10 15:50:46] 2025-10-10 15:50:14,494 | INFO     | job summary report
[2025-10-10 15:50:46] 2025-10-10 15:50:14,494 | INFO     | --------------------------------------------------
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | PanDA job id: 6837401820
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | task id: 46676269
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | errors: (none)
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | pilot state: finished 
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | transexitcode: 0
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | exeerrorcode: 0
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | exeerrordiag: 
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | exitcode: 0
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | exitmsg: OK
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | cpuconsumptiontime: 34570 s
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | nevents: 400
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | neventsw: 0
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | pid: 1999588
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | pgrp: 1999588
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | corecount: 12
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | event service: False
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | sizes: {0: 2348687, 1: 2348886, 6: 2349148, 11: 2349176, 3204: 2383919, 3206: 2383919, 3212: 2384273}
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | --------------------------------------------------
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | 
[2025-10-10 15:50:46] 2025-10-10 15:50:14,495 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-10 15:50:46] 2025-10-10 15:50:14,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:50:46] 2025-10-10 15:50:14,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:50:46] 2025-10-10 15:50:14,518 | INFO     | job 6837401820 has completed (purged errors)
[2025-10-10 15:50:46] 2025-10-10 15:50:14,518 | INFO     | overall cleanup function is called
[2025-10-10 15:50:46] 2025-10-10 15:50:15,526 | INFO     | --- collectZombieJob: --- 10, [1999588]
[2025-10-10 15:50:46] 2025-10-10 15:50:15,526 | INFO     | zombie collector waiting for pid 1999588
[2025-10-10 15:50:46] 2025-10-10 15:50:15,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:50:46] 2025-10-10 15:50:15,527 | INFO     | collected zombie processes
[2025-10-10 15:50:46] 2025-10-10 15:50:15,527 | INFO     | will attempt to kill all subprocesses of pid=1999588
[2025-10-10 15:50:46] 2025-10-10 15:50:15,992 | INFO     | process IDs to be killed: [1999588] (in reverse order)
[2025-10-10 15:50:46] 2025-10-10 15:50:16,165 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:50:46] 2025-10-10 15:50:16,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:50:46] 2025-10-10 15:50:16,183 | INFO     | did not find any defunct processes belonging to 1999588
[2025-10-10 15:50:46] 2025-10-10 15:50:16,198 | INFO     | did not find any defunct processes belonging to 1999588
[2025-10-10 15:50:46] 2025-10-10 15:50:16,198 | INFO     | ready for new job
[2025-10-10 15:50:46] 2025-10-10 15:50:16,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:50:46] 2025-10-10 15:50:16,199 | INFO     | ***************************************
[2025-10-10 15:50:46] 2025-10-10 15:50:16,199 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 15:50:46] 2025-10-10 15:50:16,199 | INFO     | ***************************************
[2025-10-10 15:50:46] 2025-10-10 15:50:16,200 | INFO     | 
[2025-10-10 15:50:46] 2025-10-10 15:50:16,213 | INFO     | architecture information:
[2025-10-10 15:50:46] 2025-10-10 15:50:16,213 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:50:46] 2025-10-10 15:50:16,230 | INFO     | cat /etc/os-release:
[2025-10-10 15:50:46] NAME="CentOS Linux"
[2025-10-10 15:50:46] VERSION="7 (Core)"
[2025-10-10 15:50:46] ID="centos"
[2025-10-10 15:50:46] ID_LIKE="rhel fedora"
[2025-10-10 15:50:46] VERSION_ID="7"
[2025-10-10 15:50:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:50:46] ANSI_COLOR="0;31"
[2025-10-10 15:50:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:50:46] HOME_URL="https://www.centos.org/"
[2025-10-10 15:50:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:50:46] 
[2025-10-10 15:50:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:50:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:50:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:50:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:50:46] 
[2025-10-10 15:50:46] 2025-10-10 15:50:16,230 | INFO     | ***************************************
[2025-10-10 15:50:46] 2025-10-10 15:50:16,731 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-10 15:50:46] 2025-10-10 15:50:16,753 | INFO     | sufficient remaining disk space (1725307027456 B)
[2025-10-10 15:50:46] 2025-10-10 15:50:16,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:50:46] 2025-10-10 15:50:16,755 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:50:46] 2025-10-10 15:50:16,755 | INFO     | update_server=False
[2025-10-10 15:50:46] 2025-10-10 15:50:16,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:50:46] 2025-10-10 15:50:16,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:50:46] 2025-10-10 15:50:16,756 | INFO     | aborting loop
[2025-10-10 15:50:46] 2025-10-10 15:50:17,332 | INFO     | all payload control threads have been joined
[2025-10-10 15:50:46] 2025-10-10 15:50:17,357 | INFO     | all job control threads have been joined
[2025-10-10 15:50:46] 2025-10-10 15:50:17,530 | INFO     | all data control threads have been joined
[2025-10-10 15:50:46] 2025-10-10 15:50:17,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:50:46] 2025-10-10 15:50:17,758 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:17,761 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:17,910 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,334 | INFO     | [payload] control thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,362 | INFO     | [job] control thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,534 | INFO     | [data] control thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,540 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,553 | INFO     | [job] validate thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,662 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,674 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:18,823 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:19,272 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:19,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:50:46] 2025-10-10 15:50:19,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:50:46] 2025-10-10 15:50:19,654 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:20,438 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:23,406 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:50:46] 2025-10-10 15:50:31,526 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:50:46] 2025-10-10 15:50:33,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072963221312)>', '<ExcThread(monitor, started 140072305293056)>']
[2025-10-10 15:50:46] 2025-10-10 15:50:38,330 | INFO     | all workflow threads have been joined
[2025-10-10 15:50:46] 2025-10-10 15:50:38,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:50:46] 2025-10-10 15:50:38,331 | INFO     | traces error code: 0
[2025-10-10 15:50:46] 2025-10-10 15:50:38,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:50:46] 2025-10-10 15:50:46,243 | INFO     | PID=1964595 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 15:50:46] 2025-10-10 15:50:46,243 | INFO     | .. there are 15 such processes running
[2025-10-10 15:50:46] 2025-10-10 15:50:46,244 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:50:46] 2025-10-10 15:50:46,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:50:46] 2025-10-10 15:50:46,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:50:46] 2025-10-10 15:50:46,244 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:50:46] 2025-10-10 15:50:46,244 | INFO     | [monitor] control thread has ended
[2025-10-10 15:50:46] 2025-10-10 15:50:46,358 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:50:46] 2025-10-10 15:50:46,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:50:46] 2025-10-10 15:50:46,364 [wrapper] pilotpid: 1964595
[2025-10-10 15:50:46] 2025-10-10 15:50:46,367 [wrapper] Pilot exit status: 0
[2025-10-10 15:50:46] 2025-10-10 15:50:46,377 [wrapper] pandaids: 6837401820
[2025-10-10 15:50:46] 2025-10-10 15:50:46,508 [wrapper] cleanup supervisor_pilot 2223386 1964596
[2025-10-10 15:50:46] 2025-10-10 15:50:46,511 [wrapper] Test setup, not cleaning
[2025-10-10 15:50:46] 2025-10-10 15:50:46,514 [wrapper] apfmon messages muted
[2025-10-10 15:50:46] 2025-10-10 15:50:46,518 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:50:46] 2025-10-10 15:50:46,520 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:50:46]  *** Error codes and diagnostics ***
[2025-10-10 15:50:46]     "exeErrorCode": 0,
[2025-10-10 15:50:46]     "exeErrorDiag": "",
[2025-10-10 15:50:46]     "pilotErrorCode": 0,
[2025-10-10 15:50:46]     "pilotErrorDiag": "",
[2025-10-10 15:50:46]  *** Listing of results directory ***
[2025-10-10 15:50:46] total 403296
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc    557409 Oct 10 04:08 pilot3.tar.gz
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc      5112 Oct 10 04:16 queuedata.json
[2025-10-10 15:50:46] -rwx------ 1 boinc boinc     36292 Oct 10 04:16 runpilot2-wrapper.sh
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc       100 Oct 10 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:50:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 14:56 run_atlas
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc       105 Oct 10 14:56 job.xml
[2025-10-10 15:50:46] -rw-r--r-- 2 boinc boinc     15120 Oct 10 14:56 start_atlas.sh
[2025-10-10 15:50:46] drwxrwx--x 2 boinc boinc      4096 Oct 10 14:56 shared
[2025-10-10 15:50:46] -rw-r--r-- 2 boinc boinc    569682 Oct 10 14:56 input.tar.gz
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc      9396 Oct 10 14:56 init_data.xml
[2025-10-10 15:50:46] -rw-r--r-- 2 boinc boinc 219475066 Oct 10 14:56 EVNT.46676267._001322.pool.root.1
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc         0 Oct 10 14:56 boinc_setup_complete
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc         0 Oct 10 14:56 boinc_lockfile
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc      2550 Oct 10 14:56 pandaJob.out
[2025-10-10 15:50:46] -rw------- 1 boinc boinc    975533 Oct 10 14:56 agis_schedconf.cvmfs.json
[2025-10-10 15:50:46] -rw------- 1 boinc boinc   1560580 Oct 10 14:56 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:50:46] drwx------ 5 boinc boinc      4096 Oct 10 14:56 pilot3
[2025-10-10 15:50:46] -rw------- 1 boinc boinc 187916459 Oct 10 15:49 HITS.46676269._032449.pool.root.1
[2025-10-10 15:50:46] -rw------- 1 boinc boinc      1028 Oct 10 15:50 memory_monitor_summary.json
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc       529 Oct 10 15:50 boinc_task_state.xml
[2025-10-10 15:50:46] -rw------- 1 boinc boinc    358822 Oct 10 15:50 log.46676269._032449.job.log.tgz.1
[2025-10-10 15:50:46] -rw------- 1 boinc boinc      7741 Oct 10 15:50 heartbeat.json
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc        27 Oct 10 15:50 wrapper_checkpoint.txt
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc      8192 Oct 10 15:50 boinc_mmap_file
[2025-10-10 15:50:46] -rw------- 1 boinc boinc       823 Oct 10 15:50 pilotlog.txt
[2025-10-10 15:50:46] -rw------- 1 boinc boinc        95 Oct 10 15:50 pilot_heartbeat.json
[2025-10-10 15:50:46] -rw------- 1 boinc boinc    477851 Oct 10 15:50 log.46676269._032449.job.log.1
[2025-10-10 15:50:46] -rw------- 1 boinc boinc       357 Oct 10 15:50 output.list
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc       620 Oct 10 15:50 runtime_log
[2025-10-10 15:50:46] -rw------- 1 boinc boinc    860160 Oct 10 15:50 result.tar.gz
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc      8672 Oct 10 15:50 runtime_log.err
[2025-10-10 15:50:46] -rw------- 1 boinc boinc       643 Oct 10 15:50 4JtKDmfjJR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9KcNDmlYlsIn.diag
[2025-10-10 15:50:46] -rw-r--r-- 1 boinc boinc     21605 Oct 10 15:50 stderr.txt
[2025-10-10 15:50:46] HITS file was successfully produced:
[2025-10-10 15:50:46] -rw------- 1 boinc boinc 187916459 Oct 10 15:49 shared/HITS.pool.root.1
[2025-10-10 15:50:46]  *** Contents of shared directory: ***
[2025-10-10 15:50:46] total 399272
[2025-10-10 15:50:46] -rw-r--r-- 2 boinc boinc     15120 Oct 10 14:56 start_atlas.sh
[2025-10-10 15:50:46] -rw-r--r-- 2 boinc boinc    569682 Oct 10 14:56 input.tar.gz
[2025-10-10 15:50:46] -rw-r--r-- 2 boinc boinc 219475066 Oct 10 14:56 ATLAS.root_0
[2025-10-10 15:50:46] -rw------- 1 boinc boinc 187916459 Oct 10 15:49 HITS.pool.root.1
[2025-10-10 15:50:46] -rw------- 1 boinc boinc    860160 Oct 10 15:50 result.tar.gz
15:50:47 (1954217): run_atlas exited; CPU time 34759.928487
15:50:47 (1954217): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN