Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:53:24 (24930): wrapper (7.7.26015): starting
09:53:24 (24930): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 09:53:24] Arguments: --nthreads 8
[2025-10-10 09:53:24] Threads: 8
[2025-10-10 09:53:24] Checking for CVMFS
[2025-10-10 09:53:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 09:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 09:53:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 09:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 09:53:24] 2.11.2.0 2827 220087 88280 151547 1 57 12023970 20275201 1 130560 1 76602232 99.978 13228277 12131 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 09:53:24] CVMFS is ok
[2025-10-10 09:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 09:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 09:53:24] Further information can be found at the LHC@home message board.
[2025-10-10 09:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 09:53:24] Checking for apptainer binary...
[2025-10-10 09:53:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 09:53:24] Running /usr/bin/apptainer --version
[2025-10-10 09:53:24] apptainer version 1.3.2-1.el7
[2025-10-10 09:53:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 09:53:26] c-115-13.aglt2.org
[2025-10-10 09:53:26] apptainer works
[2025-10-10 09:53:26] Set ATHENA_PROC_NUMBER=8
[2025-10-10 09:53:26] Set ATHENA_CORE_NUMBER=8
[2025-10-10 09:53:26] Starting ATLAS job with PandaID=6837509378
[2025-10-10 09:53:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:47:00]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:47:00] 2025-10-10 15:46:15,211 | INFO     | -- intersect: -53326687564.51429
[2025-10-10 11:47:00] 2025-10-10 15:46:15,211 | INFO     | intersect: -53326687564.51429
[2025-10-10 11:47:00] 2025-10-10 15:46:15,211 | INFO     | chi2: 1.405191661208037
[2025-10-10 11:47:00] 2025-10-10 15:46:15,212 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,212 | INFO     | sum of deviations: 11858951196.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,212 | INFO     | mean x: 1760107626.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,212 | INFO     | mean y: 2476958.523809524
[2025-10-10 11:47:00] 2025-10-10 15:46:15,213 | INFO     | -- intersect: -58151387350.62813
[2025-10-10 11:47:00] 2025-10-10 15:46:15,213 | INFO     | intersect: -58151387350.62813
[2025-10-10 11:47:00] 2025-10-10 15:46:15,213 | INFO     | chi2: 1.4080982274958846
[2025-10-10 11:47:00] 2025-10-10 15:46:15,213 | INFO     | current chi2=1.4080982274958846 (change=-0.20684482893592013 %)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,213 | INFO     | right removable region: 104
[2025-10-10 11:47:00] 2025-10-10 15:46:15,213 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,214 | INFO     | sum of deviations: -2551057454.0000014
[2025-10-10 11:47:00] 2025-10-10 15:46:15,214 | INFO     | mean x: 1760107931.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,214 | INFO     | mean y: 2520527.3619047618
[2025-10-10 11:47:00] 2025-10-10 15:46:15,214 | INFO     | -- intersect: 12512385209.348436
[2025-10-10 11:47:00] 2025-10-10 15:46:15,214 | INFO     | intersect: 12512385209.348436
[2025-10-10 11:47:00] 2025-10-10 15:46:15,214 | INFO     | chi2: 0.05785335922719994
[2025-10-10 11:47:00] 2025-10-10 15:46:15,215 | INFO     | current chi2=0.05785335922719994 (change=95.88288481747297 %)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,215 | INFO     | sum of square deviations: 310052325.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,215 | INFO     | sum of deviations: -298281520.9999998
[2025-10-10 11:47:00] 2025-10-10 15:46:15,215 | INFO     | mean x: 1760108083.5
[2025-10-10 11:47:00] 2025-10-10 15:46:15,215 | INFO     | mean y: 2513360.82
[2025-10-10 11:47:00] 2025-10-10 15:46:15,216 | INFO     | -- intersect: 1695800828.5749176
[2025-10-10 11:47:00] 2025-10-10 15:46:15,216 | INFO     | intersect: 1695800828.5749176
[2025-10-10 11:47:00] 2025-10-10 15:46:15,216 | INFO     | chi2: 0.032675943117576545
[2025-10-10 11:47:00] 2025-10-10 15:46:15,216 | INFO     | current chi2=0.032675943117576545 (change=43.51936766670267 %)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,216 | INFO     | sum of square deviations: 265828240.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,217 | INFO     | sum of deviations: 1759735807.9999998
[2025-10-10 11:47:00] 2025-10-10 15:46:15,217 | INFO     | mean x: 1760108236.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,217 | INFO     | mean y: 2506436.6631578947
[2025-10-10 11:47:00] 2025-10-10 15:46:15,217 | INFO     | -- intersect: -11649097955.875853
[2025-10-10 11:47:00] 2025-10-10 15:46:15,217 | INFO     | intersect: -11649097955.875853
[2025-10-10 11:47:00] 2025-10-10 15:46:15,217 | INFO     | chi2: 0.0003374407480349647
[2025-10-10 11:47:00] 2025-10-10 15:46:15,218 | INFO     | current chi2=0.0003374407480349647 (change=98.96731137393414 %)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,218 | INFO     | sum of square deviations: 226022842.5
[2025-10-10 11:47:00] 2025-10-10 15:46:15,218 | INFO     | sum of deviations: 1387430055.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,218 | INFO     | mean x: 1760108388.5
[2025-10-10 11:47:00] 2025-10-10 15:46:15,218 | INFO     | mean y: 2507859.822222222
[2025-10-10 11:47:00] 2025-10-10 15:46:15,218 | INFO     | -- intersect: -10801830547.97617
[2025-10-10 11:47:00] 2025-10-10 15:46:15,219 | INFO     | intersect: -10801830547.97617
[2025-10-10 11:47:00] 2025-10-10 15:46:15,219 | INFO     | chi2: 0.0002768978363192834
[2025-10-10 11:47:00] 2025-10-10 15:46:15,219 | INFO     | current chi2=0.0002768978363192834 (change=17.941790393793216 %)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,219 | INFO     | left removable region: 40
[2025-10-10 11:47:00] 2025-10-10 15:46:15,219 | INFO     | sum of square deviations: 81266640.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,219 | INFO     | sum of deviations: 402945321.0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,220 | INFO     | mean x: 1760108815.5
[2025-10-10 11:47:00] 2025-10-10 15:46:15,220 | INFO     | mean y: 2511990.65625
[2025-10-10 11:47:00] 2025-10-10 15:46:15,220 | INFO     | -- intersect: -8724655905.74721
[2025-10-10 11:47:00] 2025-10-10 15:46:15,220 | INFO     | intersect: -8724655905.74721
[2025-10-10 11:47:00] 2025-10-10 15:46:15,220 | INFO     | chi2: 0.00010583449319624956
[2025-10-10 11:47:00] 2025-10-10 15:46:15,220 | INFO     | -- intersect: -8724655905.74721
[2025-10-10 11:47:00] 2025-10-10 15:46:15,220 | INFO     | current memory leak: 4.96 B/s (using 64 data points, chi2=0.00)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,221 | INFO     | could have reported an average CPU frequency of 2092 MHz (7 samples)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,221 | INFO     | ..............................
[2025-10-10 11:47:00] 2025-10-10 15:46:15,221 | INFO     | . Timing measurements:
[2025-10-10 11:47:00] 2025-10-10 15:46:15,221 | INFO     | . get job = 0 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,221 | INFO     | . initial setup = 2 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,221 | INFO     | . payload setup = 7 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,221 | INFO     | . stage-in = 0 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,222 | INFO     | . payload execution = 6715 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,222 | INFO     | . stage-out = 0 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,222 | INFO     | . log creation = 0 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,222 | INFO     | ..............................
[2025-10-10 11:47:00] 2025-10-10 15:46:15,308 | INFO     | 
[2025-10-10 11:47:00] 2025-10-10 15:46:15,308 | INFO     | job summary report
[2025-10-10 11:47:00] 2025-10-10 15:46:15,309 | INFO     | --------------------------------------------------
[2025-10-10 11:47:00] 2025-10-10 15:46:15,309 | INFO     | PanDA job id: 6837509378
[2025-10-10 11:47:00] 2025-10-10 15:46:15,309 | INFO     | task id: 46676269
[2025-10-10 11:47:00] 2025-10-10 15:46:15,309 | INFO     | errors: (none)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:47:00] 2025-10-10 15:46:15,309 | INFO     | pilot state: finished 
[2025-10-10 11:47:00] 2025-10-10 15:46:15,310 | INFO     | transexitcode: 0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,310 | INFO     | exeerrorcode: 0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,310 | INFO     | exeerrordiag: 
[2025-10-10 11:47:00] 2025-10-10 15:46:15,310 | INFO     | exitcode: 0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,310 | INFO     | exitmsg: OK
[2025-10-10 11:47:00] 2025-10-10 15:46:15,311 | INFO     | cpuconsumptiontime: 50470 s
[2025-10-10 11:47:00] 2025-10-10 15:46:15,311 | INFO     | nevents: 400
[2025-10-10 11:47:00] 2025-10-10 15:46:15,311 | INFO     | neventsw: 0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,311 | INFO     | pid: 2631
[2025-10-10 11:47:00] 2025-10-10 15:46:15,311 | INFO     | pgrp: 2631
[2025-10-10 11:47:00] 2025-10-10 15:46:15,311 | INFO     | corecount: 8
[2025-10-10 11:47:00] 2025-10-10 15:46:15,312 | INFO     | event service: False
[2025-10-10 11:47:00] 2025-10-10 15:46:15,312 | INFO     | sizes: {0: 2348029, 1: 2348885, 7: 2349147, 12: 2349175, 6727: 2376288, 6729: 2385470, 6735: 2385608}
[2025-10-10 11:47:00] 2025-10-10 15:46:15,312 | INFO     | --------------------------------------------------
[2025-10-10 11:47:00] 2025-10-10 15:46:15,312 | INFO     | 
[2025-10-10 11:47:00] 2025-10-10 15:46:15,312 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 11:47:00] 2025-10-10 15:46:15,339 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,339 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,340 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,340 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,342 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,342 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,342 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,342 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,343 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:47:00] 2025-10-10 15:46:15,343 | INFO     | job 6837509378 has completed (purged errors)
[2025-10-10 11:47:00] 2025-10-10 15:46:15,343 | INFO     | overall cleanup function is called
[2025-10-10 11:47:00] 2025-10-10 15:46:16,352 | INFO     | --- collectZombieJob: --- 10, [2631]
[2025-10-10 11:47:00] 2025-10-10 15:46:16,352 | INFO     | zombie collector waiting for pid 2631
[2025-10-10 11:47:00] 2025-10-10 15:46:16,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:47:00] 2025-10-10 15:46:16,353 | INFO     | collected zombie processes
[2025-10-10 11:47:00] 2025-10-10 15:46:16,353 | INFO     | will attempt to kill all subprocesses of pid=2631
[2025-10-10 11:47:00] 2025-10-10 15:46:16,437 | INFO     | process IDs to be killed: [2631] (in reverse order)
[2025-10-10 11:47:00] 2025-10-10 15:46:16,491 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:47:00] 2025-10-10 15:46:16,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:47:00] 2025-10-10 15:46:16,496 | INFO     | did not find any defunct processes belonging to 2631
[2025-10-10 11:47:00] 2025-10-10 15:46:16,500 | INFO     | did not find any defunct processes belonging to 2631
[2025-10-10 11:47:00] 2025-10-10 15:46:16,500 | INFO     | ready for new job
[2025-10-10 11:47:00] 2025-10-10 15:46:16,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:47:00] 2025-10-10 15:46:16,502 | INFO     | ***************************************
[2025-10-10 11:47:00] 2025-10-10 15:46:16,502 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 11:47:00] 2025-10-10 15:46:16,502 | INFO     | ***************************************
[2025-10-10 11:47:00] 2025-10-10 15:46:16,502 | INFO     | 
[2025-10-10 11:47:00] 2025-10-10 15:46:16,502 | INFO     | architecture information:
[2025-10-10 11:47:00] 2025-10-10 15:46:16,503 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:47:00] 2025-10-10 15:46:16,522 | INFO     | cat /etc/os-release:
[2025-10-10 11:47:00] NAME="CentOS Linux"
[2025-10-10 11:47:00] VERSION="7 (Core)"
[2025-10-10 11:47:00] ID="centos"
[2025-10-10 11:47:00] ID_LIKE="rhel fedora"
[2025-10-10 11:47:00] VERSION_ID="7"
[2025-10-10 11:47:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:47:00] ANSI_COLOR="0;31"
[2025-10-10 11:47:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:47:00] HOME_URL="https://www.centos.org/"
[2025-10-10 11:47:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:47:00] 
[2025-10-10 11:47:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:47:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:47:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:47:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:47:00] 
[2025-10-10 11:47:00] 2025-10-10 15:46:16,523 | INFO     | ***************************************
[2025-10-10 11:47:00] 2025-10-10 15:46:17,026 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 11:47:00] 2025-10-10 15:46:17,045 | INFO     | sufficient remaining disk space (18588106752 B)
[2025-10-10 11:47:00] 2025-10-10 15:46:17,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:47:00] 2025-10-10 15:46:17,046 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:47:00] 2025-10-10 15:46:17,046 | INFO     | update_server=False
[2025-10-10 11:47:00] 2025-10-10 15:46:17,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:47:00] 2025-10-10 15:46:17,046 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 11:47:00] 2025-10-10 15:46:17,047 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:47:00] 2025-10-10 15:46:17,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:47:00] 2025-10-10 15:46:17,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:47:00] 2025-10-10 15:46:17,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:47:00] 2025-10-10 15:46:17,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:47:00] 2025-10-10 15:46:17,316 | INFO     | all payload control threads have been joined
[2025-10-10 11:47:00] 2025-10-10 15:46:17,710 | INFO     | all job control threads have been joined
[2025-10-10 11:47:00] 2025-10-10 15:46:17,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:47:00] 2025-10-10 15:46:17,896 | INFO     | aborting loop
[2025-10-10 11:47:00] 2025-10-10 15:46:18,052 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,053 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,120 | INFO     | all data control threads have been joined
[2025-10-10 11:47:00] 2025-10-10 15:46:18,319 | INFO     | [payload] control thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,498 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,716 | INFO     | [job] control thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,774 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,901 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,915 | INFO     | [job] validate thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:18,922 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:19,043 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:19,047 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:19,126 | INFO     | [data] control thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:19,263 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:19,552 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:19,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:47:00] 2025-10-10 15:46:23,844 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:27,569 | INFO     | job.realtimelogging is not enabled
[2025-10-10 11:47:00] 2025-10-10 15:46:28,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:47:00] 2025-10-10 15:46:53,605 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:47:00] 2025-10-10 15:46:55,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128142718784)>', '<ExcThread(monitor, started 140127200343808)>']
[2025-10-10 11:47:00] 2025-10-10 15:46:56,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:47:00] 2025-10-10 15:46:56,222 | INFO     | [monitor] control thread has ended
[2025-10-10 11:47:00] 2025-10-10 15:47:00,318 | INFO     | all workflow threads have been joined
[2025-10-10 11:47:00] 2025-10-10 15:47:00,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:47:00] 2025-10-10 15:47:00,319 | INFO     | traces error code: 0
[2025-10-10 11:47:00] 2025-10-10 15:47:00,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:47:00] 2025-10-10 15:47:00,431 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:47:00] 2025-10-10 15:47:00,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:47:00] 2025-10-10 15:47:00,440 [wrapper] pilotpid: 28607
[2025-10-10 11:47:00] 2025-10-10 15:47:00,444 [wrapper] Pilot exit status: 0
[2025-10-10 11:47:00] 2025-10-10 15:47:00,463 [wrapper] pandaids: 6837509378
[2025-10-10 11:47:00] 2025-10-10 15:47:00,511 [wrapper] cleanup supervisor_pilot  5063 28608
[2025-10-10 11:47:00] 2025-10-10 15:47:00,516 [wrapper] Test setup, not cleaning
[2025-10-10 11:47:00] 2025-10-10 15:47:00,520 [wrapper] apfmon messages muted
[2025-10-10 11:47:00] 2025-10-10 15:47:00,525 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:47:00] 2025-10-10 15:47:00,529 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:47:00]  *** Error codes and diagnostics ***
[2025-10-10 11:47:00]     "exeErrorCode": 0,
[2025-10-10 11:47:00]     "exeErrorDiag": "",
[2025-10-10 11:47:00]     "pilotErrorCode": 0,
[2025-10-10 11:47:00]     "pilotErrorDiag": "",
[2025-10-10 11:47:00]  *** Listing of results directory ***
[2025-10-10 11:47:00] total 410688
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 03:40 pilot3.tar.gz
[2025-10-10 11:47:00] -rwx------ 1 boincer umatlas     36292 Oct 10 03:46 runpilot2-wrapper.sh
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 03:46 queuedata.json
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas       100 Oct 10 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:47:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 09:53 run_atlas
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas       105 Oct 10 09:53 job.xml
[2025-10-10 11:47:00] -rw-r--r-- 2 boincer umatlas 220218032 Oct 10 09:53 EVNT.46676267._001409.pool.root.1
[2025-10-10 11:47:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 09:53 start_atlas.sh
[2025-10-10 11:47:00] drwxrwx--x 2 boincer umatlas      4096 Oct 10 09:53 shared
[2025-10-10 11:47:00] -rw-r--r-- 2 boincer umatlas    569673 Oct 10 09:53 input.tar.gz
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas         0 Oct 10 09:53 boinc_lockfile
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 09:53 pandaJob.out
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas    975525 Oct 10 09:53 agis_schedconf.cvmfs.json
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas   1560580 Oct 10 09:53 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:47:00] drwx------ 5 boincer umatlas      4096 Oct 10 09:53 pilot3
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas 193778856 Oct 10 11:45 HITS.46676269._034651.pool.root.1
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas      5909 Oct 10 11:45 init_data.xml
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas       529 Oct 10 11:45 boinc_task_state.xml
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas      1050 Oct 10 11:46 memory_monitor_summary.json
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas    367872 Oct 10 11:46 log.46676269._034651.job.log.tgz.1
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas        95 Oct 10 11:46 pilot_heartbeat.json
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas      7847 Oct 10 11:46 heartbeat.json
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas        27 Oct 10 11:46 wrapper_checkpoint.txt
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 11:46 boinc_mmap_file
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas      4624 Oct 10 11:47 pilotlog.txt
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas    954133 Oct 10 11:47 log.46676269._034651.job.log.1
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas       357 Oct 10 11:47 output.list
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas       620 Oct 10 11:47 runtime_log
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas   1341440 Oct 10 11:47 result.tar.gz
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 11:47 runtime_log.err
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas       659 Oct 10 11:47 clGLDmk0MR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzWPMDm78Rxbm.diag
[2025-10-10 11:47:00] -rw-r--r-- 1 boincer umatlas     20759 Oct 10 11:47 stderr.txt
[2025-10-10 11:47:00] HITS file was successfully produced:
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas 193778856 Oct 10 11:45 shared/HITS.pool.root.1
[2025-10-10 11:47:00]  *** Contents of shared directory: ***
[2025-10-10 11:47:00] total 406192
[2025-10-10 11:47:00] -rw-r--r-- 2 boincer umatlas 220218032 Oct 10 09:53 ATLAS.root_0
[2025-10-10 11:47:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 09:53 start_atlas.sh
[2025-10-10 11:47:00] -rw-r--r-- 2 boincer umatlas    569673 Oct 10 09:53 input.tar.gz
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas 193778856 Oct 10 11:45 HITS.pool.root.1
[2025-10-10 11:47:00] -rw------- 1 boincer umatlas   1341440 Oct 10 11:47 result.tar.gz
11:47:02 (24930): run_atlas exited; CPU time 50427.107813
11:47:02 (24930): called boinc_finish(0)

</stderr_txt>
]]>

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