Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:43:11 (29398): wrapper (7.7.26015): starting
09:43:11 (29398): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 09:43:11] Arguments: --nthreads 8
[2025-10-10 09:43:11] Threads: 8
[2025-10-10 09:43:11] Checking for CVMFS
[2025-10-10 09:43:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 09:43:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 09:43:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 09:43:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 09:43:11] 2.11.2.0 25047 49944 110356 151547 3 188 12151126 20275201 917 130560 0 56167833 99.977 2294314 23494 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 09:43:11] CVMFS is ok
[2025-10-10 09:43:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 09:43:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 09:43:11] Further information can be found at the LHC@home message board.
[2025-10-10 09:43:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 09:43:11] Checking for apptainer binary...
[2025-10-10 09:43:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 09:43:11] Running /usr/bin/apptainer --version
[2025-10-10 09:43:11] apptainer version 1.3.2-1.el7
[2025-10-10 09:43:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 09:43:12] c-205-37.aglt2.org
[2025-10-10 09:43:12] apptainer works
[2025-10-10 09:43:12] Set ATHENA_PROC_NUMBER=8
[2025-10-10 09:43:12] Set ATHENA_CORE_NUMBER=8
[2025-10-10 09:43:12] Starting ATLAS job with PandaID=6837327664
[2025-10-10 09:43:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 10:51:36]  *** The last 200 lines of the pilot log: ***
[2025-10-10 10:51:36]  scope=mc23_13p6TeV
[2025-10-10 10:51:36]  status=None
[2025-10-10 10:51:36]  status_code=0
[2025-10-10 10:51:36]  storage_token=
[2025-10-10 10:51:36]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6837327664/log.46676269._013180.job.log.tgz.1
[2025-10-10 10:51:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/20/log.46676269._013180.job.log.tgz.1
[2025-10-10 10:51:36]  workdir=None
[2025-10-10 10:51:36] ]
[2025-10-10 10:51:36] 2025-10-10 14:50:57,238 | INFO     | transferring file log.46676269._013180.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6837327664/log.46676269._013180.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 10:51:36] 2025-10-10 14:50:57,238 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6837327664/log.46676269._013180.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._013180.job
[2025-10-10 10:51:36] 2025-10-10 14:50:57,259 | INFO     | adding to output.list: log.46676269._013180.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/20/log.46676269._013180.job.log.tg
[2025-10-10 10:51:36] 2025-10-10 14:50:57,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 10:51:36] 2025-10-10 14:50:57,259 | INFO     | summary of transferred files:
[2025-10-10 10:51:36] 2025-10-10 14:50:57,260 | INFO     |  -- lfn=log.46676269._013180.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 10:51:36] 2025-10-10 14:50:57,260 | INFO     | stage-out finished correctly
[2025-10-10 10:51:36] 2025-10-10 14:50:57,889 | INFO     | monitor loop #303: job 0:6837327664 is in state 'finished'
[2025-10-10 10:51:36] 2025-10-10 14:50:57,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 10:51:36] 2025-10-10 14:50:58,715 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 10:51:36] 2025-10-10 14:50:58,773 | INFO     | time since job start (4054s) is within the limit (172800.0s)
[2025-10-10 10:51:36] 2025-10-10 14:50:59,920 | INFO     | PID=713 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-10 10:51:36] 2025-10-10 14:50:59,921 | INFO     | .. there are 2 such processes running
[2025-10-10 10:51:36] 2025-10-10 14:51:00,392 | INFO     | monitor loop #304: job 0:6837327664 is in state 'finished'
[2025-10-10 10:51:36] 2025-10-10 14:51:00,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 10:51:36] 2025-10-10 14:51:00,466 | INFO     | job 6837327664 has state=finished
[2025-10-10 10:51:36] 2025-10-10 14:51:00,467 | INFO     | preparing for final server update for job 6837327664 in state='finished'
[2025-10-10 10:51:36] 2025-10-10 14:51:00,467 | INFO     | this job has now completed (state=finished)
[2025-10-10 10:51:36] 2025-10-10 14:51:00,467 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 10:51:36] 2025-10-10 14:51:00,468 | INFO     | log transfer has been attempted: DONE
[2025-10-10 10:51:36] 2025-10-10 14:51:00,468 | INFO     | job 6837327664 has finished - writing final server update
[2025-10-10 10:51:36] 2025-10-10 14:51:00,468 | INFO     | total number of processed events: 400 (read)
[2025-10-10 10:51:36] 2025-10-10 14:51:00,469 | INFO     | executing command: lscpu
[2025-10-10 10:51:36] 2025-10-10 14:51:00,503 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 10:51:36] 2025-10-10 14:51:00,921 | INFO     | time since job start (4056s) is within the limit (172800.0s)
[2025-10-10 10:51:36] 2025-10-10 14:51:02,896 | INFO     | monitor loop #305: job 0:6837327664 is in state 'finished'
[2025-10-10 10:51:36] 2025-10-10 14:51:02,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 10:51:36] 2025-10-10 14:51:02,927 | INFO     | time since job start (4058s) is within the limit (172800.0s)
[2025-10-10 10:51:36] 2025-10-10 14:51:04,812 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 10:51:36] 2025-10-10 14:51:04,815 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1971.9997500000002
[2025-10-10 10:51:36] 2025-10-10 14:51:04,818 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837327664/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 10:51:36] 2025-10-10 14:51:04,818 | INFO     | extracted standard info from prmon json
[2025-10-10 10:51:36] 2025-10-10 14:51:04,818 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 10:51:36] 2025-10-10 14:51:04,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 10:51:36] 2025-10-10 14:51:04,819 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 10:51:36] 2025-10-10 14:51:04,819 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 10:51:36] 2025-10-10 14:51:04,820 | INFO     | fitting pss+swap vs Time
[2025-10-10 10:51:36] 2025-10-10 14:51:04,820 | INFO     | sum of square deviations: 63666310.0
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | sum of deviations: -2525925332.0000005
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | mean x: 1760105903.0
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | mean y: 2557112.6440677964
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | -- intersect: 69833776911.47388
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | intersect: 69833776911.47388
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | chi2: 0.013265128967701913
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | -- intersect: 69833776911.47388
[2025-10-10 10:51:36] 2025-10-10 14:51:04,821 | INFO     | current memory leak: -39.67 B/s (using 59 data points, chi2=0.01)
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | could have reported an average CPU frequency of 2220 MHz (6 samples)
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | ..............................
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . Timing measurements:
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . get job = 0 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . initial setup = 2 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . payload setup = 5 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . stage-in = 0 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . payload execution = 4027 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . stage-out = 0 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | . log creation = 0 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,822 | INFO     | ..............................
[2025-10-10 10:51:36] 2025-10-10 14:51:04,881 | INFO     | 
[2025-10-10 10:51:36] 2025-10-10 14:51:04,882 | INFO     | job summary report
[2025-10-10 10:51:36] 2025-10-10 14:51:04,882 | INFO     | --------------------------------------------------
[2025-10-10 10:51:36] 2025-10-10 14:51:04,882 | INFO     | PanDA job id: 6837327664
[2025-10-10 10:51:36] 2025-10-10 14:51:04,882 | INFO     | task id: 46676269
[2025-10-10 10:51:36] 2025-10-10 14:51:04,882 | INFO     | errors: (none)
[2025-10-10 10:51:36] 2025-10-10 14:51:04,882 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | pilot state: finished 
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | transexitcode: 0
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | exeerrorcode: 0
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | exeerrordiag: 
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | exitcode: 0
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | exitmsg: OK
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | cpuconsumptiontime: 29783 s
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | nevents: 400
[2025-10-10 10:51:36] 2025-10-10 14:51:04,883 | INFO     | neventsw: 0
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | pid: 7259
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | pgrp: 7259
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | corecount: 8
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | event service: False
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | sizes: {0: 2348856, 1: 2348856, 5: 2349146, 11: 2349202, 4036: 2375178, 4037: 2384176, 4039: 2384360, 4045: 2384554}
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | --------------------------------------------------
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | 
[2025-10-10 10:51:36] 2025-10-10 14:51:04,884 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 10:51:36] 2025-10-10 14:51:04,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,906 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 10:51:36] 2025-10-10 14:51:04,907 | INFO     | job 6837327664 has completed (purged errors)
[2025-10-10 10:51:36] 2025-10-10 14:51:04,907 | INFO     | overall cleanup function is called
[2025-10-10 10:51:36] 2025-10-10 14:51:05,915 | INFO     | --- collectZombieJob: --- 10, [7259]
[2025-10-10 10:51:36] 2025-10-10 14:51:05,915 | INFO     | zombie collector waiting for pid 7259
[2025-10-10 10:51:36] 2025-10-10 14:51:05,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 10:51:36] 2025-10-10 14:51:05,915 | INFO     | collected zombie processes
[2025-10-10 10:51:36] 2025-10-10 14:51:05,915 | INFO     | will attempt to kill all subprocesses of pid=7259
[2025-10-10 10:51:36] 2025-10-10 14:51:06,035 | INFO     | process IDs to be killed: [7259] (in reverse order)
[2025-10-10 10:51:36] 2025-10-10 14:51:06,080 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 10:51:36] 2025-10-10 14:51:06,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 10:51:36] 2025-10-10 14:51:06,085 | INFO     | did not find any defunct processes belonging to 7259
[2025-10-10 10:51:36] 2025-10-10 14:51:06,088 | INFO     | did not find any defunct processes belonging to 7259
[2025-10-10 10:51:36] 2025-10-10 14:51:06,089 | INFO     | ready for new job
[2025-10-10 10:51:36] 2025-10-10 14:51:06,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 10:51:36] 2025-10-10 14:51:06,091 | INFO     | ***************************************
[2025-10-10 10:51:36] 2025-10-10 14:51:06,091 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 10:51:36] 2025-10-10 14:51:06,091 | INFO     | ***************************************
[2025-10-10 10:51:36] 2025-10-10 14:51:06,091 | INFO     | 
[2025-10-10 10:51:36] 2025-10-10 14:51:06,092 | INFO     | architecture information:
[2025-10-10 10:51:36] 2025-10-10 14:51:06,093 | INFO     | executing command: cat /etc/os-release
[2025-10-10 10:51:36] 2025-10-10 14:51:06,110 | INFO     | cat /etc/os-release:
[2025-10-10 10:51:36] NAME="CentOS Linux"
[2025-10-10 10:51:36] VERSION="7 (Core)"
[2025-10-10 10:51:36] ID="centos"
[2025-10-10 10:51:36] ID_LIKE="rhel fedora"
[2025-10-10 10:51:36] VERSION_ID="7"
[2025-10-10 10:51:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 10:51:36] ANSI_COLOR="0;31"
[2025-10-10 10:51:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 10:51:36] HOME_URL="https://www.centos.org/"
[2025-10-10 10:51:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 10:51:36] 
[2025-10-10 10:51:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 10:51:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 10:51:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 10:51:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 10:51:36] 
[2025-10-10 10:51:36] 2025-10-10 14:51:06,110 | INFO     | ***************************************
[2025-10-10 10:51:36] 2025-10-10 14:51:06,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 10:51:36] 2025-10-10 14:51:06,633 | INFO     | sufficient remaining disk space (32932626432 B)
[2025-10-10 10:51:36] 2025-10-10 14:51:06,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 10:51:36] 2025-10-10 14:51:06,633 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 10:51:36] 2025-10-10 14:51:06,633 | INFO     | update_server=False
[2025-10-10 10:51:36] 2025-10-10 14:51:06,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 10:51:36] 2025-10-10 14:51:06,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:51:36] 2025-10-10 14:51:06,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:51:36] 2025-10-10 14:51:06,634 | INFO     | aborting loop
[2025-10-10 10:51:36] 2025-10-10 14:51:06,681 | INFO     | all payload control threads have been joined
[2025-10-10 10:51:36] 2025-10-10 14:51:06,689 | INFO     | all job control threads have been joined
[2025-10-10 10:51:36] 2025-10-10 14:51:06,891 | INFO     | all data control threads have been joined
[2025-10-10 10:51:36] 2025-10-10 14:51:07,639 | INFO     | [job] retrieve thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:07,640 | INFO     | [job] queue monitor thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:07,640 | INFO     | [job] job monitor thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:07,662 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:07,684 | INFO     | [payload] control thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:07,690 | INFO     | [job] control thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:07,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 10:51:36] 2025-10-10 14:51:07,896 | INFO     | [data] control thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:08,453 | INFO     | [payload] validate_post thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:08,564 | INFO     | [job] validate thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:08,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:08,810 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:08,838 | INFO     | [data] copytool_in thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:08,955 | INFO     | [payload] failed_post thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:09,025 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:09,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 10:51:36] 2025-10-10 14:51:09,831 | INFO     | [data] copytool_out thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:13,312 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 10:51:36] 2025-10-10 14:51:30,112 | INFO     | [monitor] cgroup control has ended
[2025-10-10 10:51:36] 2025-10-10 14:51:30,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796536035136)>', '<ExcThread(monitor, started 139795883882240)>']
[2025-10-10 10:51:36] 2025-10-10 14:51:35,552 | INFO     | all workflow threads have been joined
[2025-10-10 10:51:36] 2025-10-10 14:51:35,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 10:51:36] 2025-10-10 14:51:35,552 | INFO     | traces error code: 0
[2025-10-10 10:51:36] 2025-10-10 14:51:35,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 10:51:36] 2025-10-10 14:51:36,150 | INFO     | PID=713 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-10 10:51:36] 2025-10-10 14:51:36,150 | INFO     | .. there are 2 such processes running
[2025-10-10 10:51:36] 2025-10-10 14:51:36,151 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 10:51:36] 2025-10-10 14:51:36,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 10:51:36] 2025-10-10 14:51:36,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 10:51:36] 2025-10-10 14:51:36,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 10:51:36] 2025-10-10 14:51:36,151 | INFO     | [monitor] control thread has ended
[2025-10-10 10:51:36] 2025-10-10 14:51:36,251 [wrapper] ==== pilot stdout END ====
[2025-10-10 10:51:36] 2025-10-10 14:51:36,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 10:51:36] 2025-10-10 14:51:36,258 [wrapper] pilotpid: 713
[2025-10-10 10:51:36] 2025-10-10 14:51:36,261 [wrapper] Pilot exit status: 0
[2025-10-10 10:51:36] 2025-10-10 14:51:36,273 [wrapper] pandaids: 6837327664
[2025-10-10 10:51:36] 2025-10-10 14:51:36,316 [wrapper] cleanup supervisor_pilot 26749 714
[2025-10-10 10:51:36] 2025-10-10 14:51:36,320 [wrapper] Test setup, not cleaning
[2025-10-10 10:51:36] 2025-10-10 14:51:36,324 [wrapper] apfmon messages muted
[2025-10-10 10:51:36] 2025-10-10 14:51:36,328 [wrapper] ==== wrapper stdout END ====
[2025-10-10 10:51:36] 2025-10-10 14:51:36,331 [wrapper] ==== wrapper stderr END ====
[2025-10-10 10:51:36]  *** Error codes and diagnostics ***
[2025-10-10 10:51:36]     "exeErrorCode": 0,
[2025-10-10 10:51:36]     "exeErrorDiag": "",
[2025-10-10 10:51:36]     "pilotErrorCode": 0,
[2025-10-10 10:51:36]     "pilotErrorDiag": "",
[2025-10-10 10:51:36]  *** Listing of results directory ***
[2025-10-10 10:51:36] total 415900
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-10 10:51:36] -rwx------ 1 boincer umatlas     36292 Oct  9 06:42 runpilot2-wrapper.sh
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 06:44 queuedata.json
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas       100 Oct 10 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 10:51:36] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 09:43 run_atlas
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas       105 Oct 10 09:43 job.xml
[2025-10-10 10:51:36] -rw-r--r-- 2 boincer umatlas 218689571 Oct 10 09:43 EVNT.46676267._000535.pool.root.1
[2025-10-10 10:51:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 09:43 start_atlas.sh
[2025-10-10 10:51:36] drwxrwx--x 2 boincer umatlas      4096 Oct 10 09:43 shared
[2025-10-10 10:51:36] -rw-r--r-- 2 boincer umatlas    569686 Oct 10 09:43 input.tar.gz
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas         0 Oct 10 09:43 boinc_lockfile
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 09:43 pandaJob.out
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas    975525 Oct 10 09:43 agis_schedconf.cvmfs.json
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas   1560580 Oct 10 09:43 agis_ddmendpoints.agis.ALL.json
[2025-10-10 10:51:36] drwx------ 5 boincer umatlas      4096 Oct 10 09:43 pilot3
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas      6135 Oct 10 10:47 init_data.xml
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas 201460680 Oct 10 10:50 HITS.46676269._013180.pool.root.1
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas       530 Oct 10 10:50 boinc_task_state.xml
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas      1045 Oct 10 10:50 memory_monitor_summary.json
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas    308951 Oct 10 10:50 log.46676269._013180.job.log.tgz.1
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas      7837 Oct 10 10:51 heartbeat.json
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 10:51 boinc_mmap_file
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas        27 Oct 10 10:51 wrapper_checkpoint.txt
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas       818 Oct 10 10:51 pilotlog.txt
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas        95 Oct 10 10:51 pilot_heartbeat.json
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas    607960 Oct 10 10:51 log.46676269._013180.job.log.1
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas       357 Oct 10 10:51 output.list
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas       620 Oct 10 10:51 runtime_log
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas    931840 Oct 10 10:51 result.tar.gz
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 10:51 runtime_log.err
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas       656 Oct 10 10:51 ogwMDmbH3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjBZNDmAPvrCo.diag
[2025-10-10 10:51:36] -rw-r--r-- 1 boincer umatlas     21983 Oct 10 10:51 stderr.txt
[2025-10-10 10:51:36] HITS file was successfully produced:
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas 201460680 Oct 10 10:50 shared/HITS.pool.root.1
[2025-10-10 10:51:36]  *** Contents of shared directory: ***
[2025-10-10 10:51:36] total 411800
[2025-10-10 10:51:36] -rw-r--r-- 2 boincer umatlas 218689571 Oct 10 09:43 ATLAS.root_0
[2025-10-10 10:51:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 09:43 start_atlas.sh
[2025-10-10 10:51:36] -rw-r--r-- 2 boincer umatlas    569686 Oct 10 09:43 input.tar.gz
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas 201460680 Oct 10 10:50 HITS.pool.root.1
[2025-10-10 10:51:36] -rw------- 1 boincer umatlas    931840 Oct 10 10:51 result.tar.gz
10:51:38 (29398): run_atlas exited; CPU time 29813.537275
10:51:38 (29398): called boinc_finish(0)

</stderr_txt>
]]>

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