Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:49 (1086433): wrapper (7.7.26015): starting
09:31:49 (1086433): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 09:31:49] Arguments: --nthreads 9
[2025-10-10 09:31:49] Threads: 9
[2025-10-10 09:31:49] Checking for CVMFS
[2025-10-10 09:31:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 09:31:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 09:31:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 09:31:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 09:31:49] 2.13.2.0 4298 21534 221168 151547 2 196 21193654 32935936 4089 16776704 0 61092606 99.686 51483295 29858 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 09:31:49] CVMFS is ok
[2025-10-10 09:31:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 09:31:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 09:31:49] Further information can be found at the LHC@home message board.
[2025-10-10 09:31:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 09:31:49] Checking for apptainer binary...
[2025-10-10 09:31:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 09:31:49] Running /usr/bin/apptainer --version
[2025-10-10 09:31:49] apptainer version 1.4.3-1.el9
[2025-10-10 09:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 09:31:49] c-8-24.aglt2.org
[2025-10-10 09:31:49] apptainer works
[2025-10-10 09:31:49] Set ATHENA_PROC_NUMBER=9
[2025-10-10 09:31:49] Set ATHENA_CORE_NUMBER=9
[2025-10-10 09:31:49] Starting ATLAS job with PandaID=6837448748
[2025-10-10 09:31:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:03:36]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:03:36]  status=None
[2025-10-10 11:03:36]  status_code=0
[2025-10-10 11:03:36]  storage_token=
[2025-10-10 11:03:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837448748/log.46676269._032698.job.log.tgz.1
[2025-10-10 11:03:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/24/log.46676269._032698.job.log.tgz.1
[2025-10-10 11:03:36]  workdir=None
[2025-10-10 11:03:36] ]
[2025-10-10 11:03:36] 2025-10-10 15:02:56,516 | INFO     | transferring file log.46676269._032698.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837448748/log.46676269._032698.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 11:03:36] 2025-10-10 15:02:56,516 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837448748/log.46676269._032698.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._032698.job
[2025-10-10 11:03:36] 2025-10-10 15:02:56,532 | INFO     | adding to output.list: log.46676269._032698.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/24/log.46676269._032698.job.log.tg
[2025-10-10 11:03:36] 2025-10-10 15:02:56,533 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 11:03:36] 2025-10-10 15:02:56,533 | INFO     | summary of transferred files:
[2025-10-10 11:03:36] 2025-10-10 15:02:56,534 | INFO     |  -- lfn=log.46676269._032698.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 11:03:36] 2025-10-10 15:02:56,534 | INFO     | stage-out finished correctly
[2025-10-10 11:03:36] 2025-10-10 15:02:57,068 | INFO     | time since job start (5457s) is within the limit (172800.0s)
[2025-10-10 11:03:36] 2025-10-10 15:02:58,001 | WARNING  | process 1097079 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 11:03:36] 2025-10-10 15:02:58,001 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837448748/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 11:03:36] 2025-10-10 15:02:58,164 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 11:03:36] 2025-10-10 15:02:58,347 | INFO     | number of running child processes to parent process 1097079: 1
[2025-10-10 11:03:36] 2025-10-10 15:02:58,347 | INFO     | maximum number of monitored processes: 6
[2025-10-10 11:03:36] 2025-10-10 15:02:59,074 | INFO     | time since job start (5459s) is within the limit (172800.0s)
[2025-10-10 11:03:36] 2025-10-10 15:03:00,675 | INFO     | job 6837448748 has state=finished
[2025-10-10 11:03:36] 2025-10-10 15:03:00,675 | INFO     | preparing for final server update for job 6837448748 in state='finished'
[2025-10-10 11:03:36] 2025-10-10 15:03:00,676 | INFO     | this job has now completed (state=finished)
[2025-10-10 11:03:36] 2025-10-10 15:03:00,676 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 11:03:36] 2025-10-10 15:03:00,676 | INFO     | log transfer has been attempted: DONE
[2025-10-10 11:03:36] 2025-10-10 15:03:00,676 | INFO     | job 6837448748 has finished - writing final server update
[2025-10-10 11:03:36] 2025-10-10 15:03:00,677 | INFO     | total number of processed events: 400 (read)
[2025-10-10 11:03:36] 2025-10-10 15:03:00,677 | INFO     | executing command: lscpu
[2025-10-10 11:03:36] 2025-10-10 15:03:00,725 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 11:03:36] 2025-10-10 15:03:00,850 | INFO     | monitor loop #405: job 0:6837448748 is in state 'finished'
[2025-10-10 11:03:36] 2025-10-10 15:03:00,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 11:03:36] 2025-10-10 15:03:01,079 | INFO     | time since job start (5461s) is within the limit (172800.0s)
[2025-10-10 11:03:36] 2025-10-10 15:03:03,084 | INFO     | time since job start (5463s) is within the limit (172800.0s)
[2025-10-10 11:03:36] 2025-10-10 15:03:03,353 | INFO     | monitor loop #406: job 0:6837448748 is in state 'finished'
[2025-10-10 11:03:36] 2025-10-10 15:03:03,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 11:03:36] 2025-10-10 15:03:04,015 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 11:03:36] 2025-10-10 15:03:04,022 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2840.1164499999995
[2025-10-10 11:03:36] 2025-10-10 15:03:04,028 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837448748/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 11:03:36] 2025-10-10 15:03:04,029 | INFO     | extracted standard info from prmon json
[2025-10-10 11:03:36] 2025-10-10 15:03:04,029 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 11:03:36] 2025-10-10 15:03:04,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 11:03:36] 2025-10-10 15:03:04,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:03:36] 2025-10-10 15:03:04,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:03:36] 2025-10-10 15:03:04,033 | INFO     | fitting pss+swap vs Time
[2025-10-10 11:03:36] 2025-10-10 15:03:04,033 | INFO     | sum of square deviations: 177275882.0
[2025-10-10 11:03:36] 2025-10-10 15:03:04,034 | INFO     | sum of deviations: -5225979983.000006
[2025-10-10 11:03:36] 2025-10-10 15:03:04,034 | INFO     | mean x: 1760105949.0
[2025-10-10 11:03:36] 2025-10-10 15:03:04,034 | INFO     | mean y: 2268099.686746988
[2025-10-10 11:03:36] 2025-10-10 15:03:04,034 | INFO     | -- intersect: 51889069359.16788
[2025-10-10 11:03:36] 2025-10-10 15:03:04,034 | INFO     | intersect: 51889069359.16788
[2025-10-10 11:03:36] 2025-10-10 15:03:04,034 | INFO     | chi2: 0.051013620171664456
[2025-10-10 11:03:36] 2025-10-10 15:03:04,035 | INFO     | -- intersect: 51889069359.16788
[2025-10-10 11:03:36] 2025-10-10 15:03:04,035 | INFO     | current memory leak: -29.48 B/s (using 83 data points, chi2=0.05)
[2025-10-10 11:03:36] 2025-10-10 15:03:04,035 | INFO     | could have reported an average CPU frequency of 2837 MHz (7 samples)
[2025-10-10 11:03:36] 2025-10-10 15:03:04,035 | INFO     | ..............................
[2025-10-10 11:03:36] 2025-10-10 15:03:04,035 | INFO     | . Timing measurements:
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | . get job = 0 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | . initial setup = 2 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | . payload setup = 4 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | . stage-in = 0 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | . payload execution = 5432 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | . stage-out = 0 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | . log creation = 0 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,036 | INFO     | ..............................
[2025-10-10 11:03:36] 2025-10-10 15:03:04,142 | INFO     | 
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | job summary report
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | --------------------------------------------------
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | PanDA job id: 6837448748
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | task id: 46676269
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | errors: (none)
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | pilot state: finished 
[2025-10-10 11:03:36] 2025-10-10 15:03:04,143 | INFO     | transexitcode: 0
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | exeerrorcode: 0
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | exeerrordiag: 
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | exitcode: 0
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | exitmsg: OK
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | cpuconsumptiontime: 45311 s
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | nevents: 400
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | neventsw: 0
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | pid: 1097079
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | pgrp: 1097079
[2025-10-10 11:03:36] 2025-10-10 15:03:04,144 | INFO     | corecount: 9
[2025-10-10 11:03:36] 2025-10-10 15:03:04,145 | INFO     | event service: False
[2025-10-10 11:03:36] 2025-10-10 15:03:04,145 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 5440: 2375849, 5441: 2384847, 5443: 2385031, 5449: 2385225}
[2025-10-10 11:03:36] 2025-10-10 15:03:04,145 | INFO     | --------------------------------------------------
[2025-10-10 11:03:36] 2025-10-10 15:03:04,145 | INFO     | 
[2025-10-10 11:03:36] 2025-10-10 15:03:04,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 11:03:36] 2025-10-10 15:03:04,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | job 6837448748 has completed (purged errors)
[2025-10-10 11:03:36] 2025-10-10 15:03:04,164 | INFO     | overall cleanup function is called
[2025-10-10 11:03:36] 2025-10-10 15:03:05,173 | INFO     | --- collectZombieJob: --- 10, [1097079]
[2025-10-10 11:03:36] 2025-10-10 15:03:05,173 | INFO     | zombie collector waiting for pid 1097079
[2025-10-10 11:03:36] 2025-10-10 15:03:05,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:03:36] 2025-10-10 15:03:05,174 | INFO     | collected zombie processes
[2025-10-10 11:03:36] 2025-10-10 15:03:05,174 | INFO     | will attempt to kill all subprocesses of pid=1097079
[2025-10-10 11:03:36] 2025-10-10 15:03:05,419 | INFO     | process IDs to be killed: [1097079] (in reverse order)
[2025-10-10 11:03:36] 2025-10-10 15:03:05,490 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:03:36] 2025-10-10 15:03:05,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:03:36] 2025-10-10 15:03:05,500 | INFO     | did not find any defunct processes belonging to 1097079
[2025-10-10 11:03:36] 2025-10-10 15:03:05,507 | INFO     | did not find any defunct processes belonging to 1097079
[2025-10-10 11:03:36] 2025-10-10 15:03:05,508 | INFO     | ready for new job
[2025-10-10 11:03:36] 2025-10-10 15:03:05,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:03:36] 2025-10-10 15:03:05,510 | INFO     | ***************************************
[2025-10-10 11:03:36] 2025-10-10 15:03:05,510 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 11:03:36] 2025-10-10 15:03:05,510 | INFO     | ***************************************
[2025-10-10 11:03:36] 2025-10-10 15:03:05,510 | INFO     | 
[2025-10-10 11:03:36] 2025-10-10 15:03:05,523 | INFO     | architecture information:
[2025-10-10 11:03:36] 2025-10-10 15:03:05,524 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:03:36] 2025-10-10 15:03:05,536 | INFO     | cat /etc/os-release:
[2025-10-10 11:03:36] NAME="CentOS Linux"
[2025-10-10 11:03:36] VERSION="7 (Core)"
[2025-10-10 11:03:36] ID="centos"
[2025-10-10 11:03:36] ID_LIKE="rhel fedora"
[2025-10-10 11:03:36] VERSION_ID="7"
[2025-10-10 11:03:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:03:36] ANSI_COLOR="0;31"
[2025-10-10 11:03:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:03:36] HOME_URL="https://www.centos.org/"
[2025-10-10 11:03:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:03:36] 
[2025-10-10 11:03:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:03:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:03:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:03:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:03:36] 
[2025-10-10 11:03:36] 2025-10-10 15:03:05,536 | INFO     | ***************************************
[2025-10-10 11:03:36] 2025-10-10 15:03:06,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 11:03:36] 2025-10-10 15:03:06,053 | INFO     | sufficient remaining disk space (74682728448 B)
[2025-10-10 11:03:36] 2025-10-10 15:03:06,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:03:36] 2025-10-10 15:03:06,057 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:03:36] 2025-10-10 15:03:06,057 | INFO     | update_server=False
[2025-10-10 11:03:36] 2025-10-10 15:03:06,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:03:36] 2025-10-10 15:03:06,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:03:36] 2025-10-10 15:03:06,299 | INFO     | all data control threads have been joined
[2025-10-10 11:03:36] 2025-10-10 15:03:06,300 | INFO     | all job control threads have been joined
[2025-10-10 11:03:36] 2025-10-10 15:03:06,600 | INFO     | all payload control threads have been joined
[2025-10-10 11:03:36] 2025-10-10 15:03:06,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:03:36] 2025-10-10 15:03:06,861 | INFO     | aborting loop
[2025-10-10 11:03:36] 2025-10-10 15:03:07,063 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,064 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,067 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:03:36] 2025-10-10 15:03:07,305 | INFO     | [data] control thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,307 | INFO     | [job] control thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,395 | INFO     | [job] validate thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,462 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,571 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,603 | INFO     | [payload] control thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,866 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,866 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:07,867 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:08,110 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:08,535 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:03:36] 2025-10-10 15:03:08,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:03:36] 2025-10-10 15:03:09,160 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:12,784 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:03:36] 2025-10-10 15:03:14,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735306671936)>', '<ExcThread(monitor, started 139734672205568)>']
[2025-10-10 11:03:36] 2025-10-10 15:03:19,331 | INFO     | all workflow threads have been joined
[2025-10-10 11:03:36] 2025-10-10 15:03:19,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:03:36] 2025-10-10 15:03:19,332 | INFO     | traces error code: 0
[2025-10-10 11:03:36] 2025-10-10 15:03:19,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:03:36] 2025-10-10 15:03:36,503 | INFO     | PID=1090153 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:03:36] 2025-10-10 15:03:36,503 | INFO     | .. there are 6 such processes running
[2025-10-10 11:03:36] 2025-10-10 15:03:36,503 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:03:36] 2025-10-10 15:03:36,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:03:36] 2025-10-10 15:03:36,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:03:36] 2025-10-10 15:03:36,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:03:36] 2025-10-10 15:03:36,504 | INFO     | [monitor] control thread has ended
[2025-10-10 11:03:36] 2025-10-10 15:03:36,630 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:03:36] 2025-10-10 15:03:36,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:03:36] 2025-10-10 15:03:36,634 [wrapper] pilotpid: 1090153
[2025-10-10 11:03:36] 2025-10-10 15:03:36,636 [wrapper] Pilot exit status: 0
[2025-10-10 11:03:36] 2025-10-10 15:03:36,645 [wrapper] pandaids: 6837448748
[2025-10-10 11:03:36] 2025-10-10 15:03:36,692 [wrapper] cleanup supervisor_pilot 1290051 1090154
[2025-10-10 11:03:36] 2025-10-10 15:03:36,695 [wrapper] Test setup, not cleaning
[2025-10-10 11:03:36] 2025-10-10 15:03:36,697 [wrapper] apfmon messages muted
[2025-10-10 11:03:36] 2025-10-10 15:03:36,699 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:03:36] 2025-10-10 15:03:36,701 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:03:36]  *** Error codes and diagnostics ***
[2025-10-10 11:03:36]     "exeErrorCode": 0,
[2025-10-10 11:03:36]     "exeErrorDiag": "",
[2025-10-10 11:03:36]     "pilotErrorCode": 0,
[2025-10-10 11:03:36]     "pilotErrorDiag": "",
[2025-10-10 11:03:36]  *** Listing of results directory ***
[2025-10-10 11:03:36] total 413720
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 00:44 pilot3.tar.gz
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 01:03 queuedata.json
[2025-10-10 11:03:36] -rwx------. 1 boincer umatlas     36292 Oct 10 01:03 runpilot2-wrapper.sh
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas       100 Oct 10 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:03:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 09:31 run_atlas
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas       105 Oct 10 09:31 job.xml
[2025-10-10 11:03:36] -rw-r--r--. 2 boincer umatlas 221659747 Oct 10 09:31 EVNT.46676267._001331.pool.root.1
[2025-10-10 11:03:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 09:31 start_atlas.sh
[2025-10-10 11:03:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 09:31 shared
[2025-10-10 11:03:36] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 09:31 input.tar.gz
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas         0 Oct 10 09:31 boinc_lockfile
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 09:31 pandaJob.out
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas    975525 Oct 10 09:31 agis_schedconf.cvmfs.json
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas   1560580 Oct 10 09:31 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:03:36] drwx------. 5 boincer umatlas      4096 Oct 10 09:32 pilot3
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas      6660 Oct 10 11:02 init_data.xml
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas 195749909 Oct 10 11:02 HITS.46676269._032698.pool.root.1
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas       529 Oct 10 11:02 boinc_task_state.xml
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas        95 Oct 10 11:02 pilot_heartbeat.json
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas      1032 Oct 10 11:02 memory_monitor_summary.json
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas    369758 Oct 10 11:02 log.46676269._032698.job.log.tgz.1
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas      7813 Oct 10 11:03 heartbeat.json
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas        27 Oct 10 11:03 wrapper_checkpoint.txt
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 11:03 boinc_mmap_file
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas       822 Oct 10 11:03 pilotlog.txt
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas    800841 Oct 10 11:03 log.46676269._032698.job.log.1
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas       357 Oct 10 11:03 output.list
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas       620 Oct 10 11:03 runtime_log
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas   1187840 Oct 10 11:03 result.tar.gz
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas       649 Oct 10 11:03 XBwKDmRTKR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbNcNDmjmPOpm.diag
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas      8693 Oct 10 11:03 runtime_log.err
[2025-10-10 11:03:36] -rw-r--r--. 1 boincer umatlas     22045 Oct 10 11:03 stderr.txt
[2025-10-10 11:03:36] HITS file was successfully produced:
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas 195749909 Oct 10 11:02 shared/HITS.pool.root.1
[2025-10-10 11:03:36]  *** Contents of shared directory: ***
[2025-10-10 11:03:36] total 409372
[2025-10-10 11:03:36] -rw-r--r--. 2 boincer umatlas 221659747 Oct 10 09:31 ATLAS.root_0
[2025-10-10 11:03:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 09:31 start_atlas.sh
[2025-10-10 11:03:36] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 09:31 input.tar.gz
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas 195749909 Oct 10 11:02 HITS.pool.root.1
[2025-10-10 11:03:36] -rw-------. 1 boincer umatlas   1187840 Oct 10 11:03 result.tar.gz
11:03:38 (1086433): run_atlas exited; CPU time 45437.845573
11:03:38 (1086433): called boinc_finish(0)

</stderr_txt>
]]>

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