Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:34:33 (996884): wrapper (7.7.26015): starting
13:34:33 (996884): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 13:34:33] Arguments: --nthreads 4
[2025-10-11 13:34:33] Threads: 4
[2025-10-11 13:34:33] Checking for CVMFS
[2025-10-11 13:34:33] No cvmfs_config command found, will try listing directly
[2025-10-11 13:34:33] CVMFS is ok
[2025-10-11 13:34:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:34:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:34:33] Further information can be found at the LHC@home message board.
[2025-10-11 13:34:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:34:33] Checking for apptainer binary...
[2025-10-11 13:34:33] which: no apptainer in ((null))
[2025-10-11 13:34:33] apptainer is not installed, using version from CVMFS
[2025-10-11 13:34:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:34:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-10-11 13:34:33] apptainer works
[2025-10-11 13:34:33] Set ATHENA_PROC_NUMBER=4
[2025-10-11 13:34:33] Set ATHENA_CORE_NUMBER=4
[2025-10-11 13:34:33] Starting ATLAS job with PandaID=6837595249
[2025-10-11 13:34:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:57:26]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:57:26] 2025-10-11 15:38:13,281 | INFO     | monitor loop #1056: job 0:6837595249 is in state 'finished'
[2025-10-11 17:57:26] 2025-10-11 15:38:13,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,119 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 17:57:26] 2025-10-11 15:38:14,126 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2579.414875
[2025-10-11 17:57:26] 2025-10-11 15:38:14,134 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6837595249/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,135 | INFO     | extracted standard info from prmon json
[2025-10-11 17:57:26] 2025-10-11 15:38:14,136 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:57:26] 2025-10-11 15:38:14,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:57:26] 2025-10-11 15:38:14,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:57:26] 2025-10-11 15:38:14,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:57:26] 2025-10-11 15:38:14,141 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:57:26] 2025-10-11 15:38:14,142 | INFO     | sum of square deviations: 4233158440.0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,144 | INFO     | sum of deviations: 12725722948.999996
[2025-10-11 17:57:26] 2025-10-11 15:38:14,144 | INFO     | mean x: 1760189768.0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,144 | INFO     | mean y: 2341450.3012552303
[2025-10-11 17:57:26] 2025-10-11 15:38:14,144 | INFO     | -- intersect: -5289141881.287104
[2025-10-11 17:57:26] 2025-10-11 15:38:14,145 | INFO     | intersect: -5289141881.287104
[2025-10-11 17:57:26] 2025-10-11 15:38:14,145 | INFO     | chi2: 1.411818046965619
[2025-10-11 17:57:26] 2025-10-11 15:38:14,146 | INFO     | sum of square deviations: 3972995422.5
[2025-10-11 17:57:26] 2025-10-11 15:38:14,147 | INFO     | sum of deviations: 12446496333.500002
[2025-10-11 17:57:26] 2025-10-11 15:38:14,148 | INFO     | mean x: 1760189615.5
[2025-10-11 17:57:26] 2025-10-11 15:38:14,148 | INFO     | mean y: 2341286.6025641025
[2025-10-11 17:57:26] 2025-10-11 15:38:14,148 | INFO     | -- intersect: -5511934786.1848135
[2025-10-11 17:57:26] 2025-10-11 15:38:14,148 | INFO     | intersect: -5511934786.1848135
[2025-10-11 17:57:26] 2025-10-11 15:38:14,148 | INFO     | chi2: 1.4123328128475607
[2025-10-11 17:57:26] 2025-10-11 15:38:14,149 | INFO     | current chi2=1.4123328128475607 (change=-0.0364612056807279 %)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,149 | INFO     | right removable region: 233
[2025-10-11 17:57:26] 2025-10-11 15:38:14,149 | INFO     | sum of square deviations: 3972995422.5
[2025-10-11 17:57:26] 2025-10-11 15:38:14,151 | INFO     | sum of deviations: -20006742241.0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,151 | INFO     | mean x: 1760189920.5
[2025-10-11 17:57:26] 2025-10-11 15:38:14,151 | INFO     | mean y: 2360451.247863248
[2025-10-11 17:57:26] 2025-10-11 15:38:14,152 | INFO     | -- intersect: 8866117463.202938
[2025-10-11 17:57:26] 2025-10-11 15:38:14,152 | INFO     | intersect: 8866117463.202938
[2025-10-11 17:57:26] 2025-10-11 15:38:14,152 | INFO     | chi2: 0.04935752904691277
[2025-10-11 17:57:26] 2025-10-11 15:38:14,152 | INFO     | current chi2=0.04935752904691277 (change=96.5039737838034 %)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,153 | INFO     | sum of square deviations: 3723716330.0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,155 | INFO     | sum of deviations: -19937273976.999996
[2025-10-11 17:57:26] 2025-10-11 15:38:14,155 | INFO     | mean x: 1760190073.0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,155 | INFO     | mean y: 2360392.056768559
[2025-10-11 17:57:26] 2025-10-11 15:38:14,155 | INFO     | -- intersect: 9426652853.399178
[2025-10-11 17:57:26] 2025-10-11 15:38:14,155 | INFO     | intersect: 9426652853.399178
[2025-10-11 17:57:26] 2025-10-11 15:38:14,156 | INFO     | chi2: 0.04402027642428245
[2025-10-11 17:57:26] 2025-10-11 15:38:14,156 | INFO     | current chi2=0.04402027642428245 (change=10.81345181918938 %)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,156 | INFO     | left removable region: 20
[2025-10-11 17:57:26] 2025-10-11 15:38:14,156 | INFO     | sum of square deviations: 2996454322.0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,158 | INFO     | sum of deviations: -13701672197.000006
[2025-10-11 17:57:26] 2025-10-11 15:38:14,158 | INFO     | mean x: 1760190195.0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,158 | INFO     | mean y: 2356710.408450704
[2025-10-11 17:57:26] 2025-10-11 15:38:14,159 | INFO     | -- intersect: 8051052423.6026125
[2025-10-11 17:57:26] 2025-10-11 15:38:14,159 | INFO     | intersect: 8051052423.6026125
[2025-10-11 17:57:26] 2025-10-11 15:38:14,159 | INFO     | chi2: 0.03845318646005964
[2025-10-11 17:57:26] 2025-10-11 15:38:14,159 | INFO     | -- intersect: 8051052423.6026125
[2025-10-11 17:57:26] 2025-10-11 15:38:14,160 | INFO     | current memory leak: -4.57 B/s (using 213 data points, chi2=0.04)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,160 | INFO     | could have reported an average CPU frequency of 2520 MHz (12 samples)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,160 | INFO     | ..............................
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . Timing measurements:
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . get job = 0 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . initial setup = 1 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . payload setup = 5 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . stage-in = 0 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . payload execution = 14575 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . stage-out = 1 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,161 | INFO     | . log creation = 0 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,162 | INFO     | ..............................
[2025-10-11 17:57:26] 2025-10-11 15:38:14,277 | INFO     | 
[2025-10-11 17:57:26] 2025-10-11 15:38:14,277 | INFO     | job summary report
[2025-10-11 17:57:26] 2025-10-11 15:38:14,277 | INFO     | --------------------------------------------------
[2025-10-11 17:57:26] 2025-10-11 15:38:14,277 | INFO     | PanDA job id: 6837595249
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | task id: 46676269
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | errors: (none)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | pilot state: finished 
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | transexitcode: 0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | exeerrorcode: 0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | exeerrordiag: 
[2025-10-11 17:57:26] 2025-10-11 15:38:14,278 | INFO     | exitcode: 0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,279 | INFO     | exitmsg: OK
[2025-10-11 17:57:26] 2025-10-11 15:38:14,279 | INFO     | cpuconsumptiontime: 55574 s
[2025-10-11 17:57:26] 2025-10-11 15:38:14,279 | INFO     | nevents: 400
[2025-10-11 17:57:26] 2025-10-11 15:38:14,279 | INFO     | neventsw: 0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,279 | INFO     | pid: 1026530
[2025-10-11 17:57:26] 2025-10-11 15:38:14,279 | INFO     | pgrp: 1026530
[2025-10-11 17:57:26] 2025-10-11 15:38:14,279 | INFO     | corecount: 4
[2025-10-11 17:57:26] 2025-10-11 15:38:14,280 | INFO     | event service: False
[2025-10-11 17:57:26] 2025-10-11 15:38:14,280 | INFO     | sizes: {0: 2348868, 1: 2348868, 4: 2349158, 11: 2349186, 14584: 2380106, 14585: 2389126, 14588: 2389310, 14594: 2389504}
[2025-10-11 17:57:26] 2025-10-11 15:38:14,280 | INFO     | --------------------------------------------------
[2025-10-11 17:57:26] 2025-10-11 15:38:14,280 | INFO     | 
[2025-10-11 17:57:26] 2025-10-11 15:38:14,280 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-11 17:57:26] 2025-10-11 15:38:14,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,300 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,300 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,303 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,303 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:57:26] 2025-10-11 15:38:14,303 | INFO     | job 6837595249 has completed (purged errors)
[2025-10-11 17:57:26] 2025-10-11 15:38:14,303 | INFO     | overall cleanup function is called
[2025-10-11 17:57:26] 2025-10-11 15:38:15,312 | INFO     | --- collectZombieJob: --- 10, [1026530]
[2025-10-11 17:57:26] 2025-10-11 15:38:15,312 | INFO     | zombie collector waiting for pid 1026530
[2025-10-11 17:57:26] 2025-10-11 15:38:15,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:57:26] 2025-10-11 15:38:15,312 | INFO     | collected zombie processes
[2025-10-11 17:57:26] 2025-10-11 15:38:15,312 | INFO     | will attempt to kill all subprocesses of pid=1026530
[2025-10-11 17:57:26] 2025-10-11 15:38:15,658 | INFO     | process IDs to be killed: [1026530] (in reverse order)
[2025-10-11 17:57:26] 2025-10-11 15:38:15,739 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:57:26] 2025-10-11 15:38:15,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:57:26] 2025-10-11 15:38:15,748 | INFO     | did not find any defunct processes belonging to 1026530
[2025-10-11 17:57:26] 2025-10-11 15:38:15,756 | INFO     | did not find any defunct processes belonging to 1026530
[2025-10-11 17:57:26] 2025-10-11 15:38:15,757 | INFO     | ready for new job
[2025-10-11 17:57:26] 2025-10-11 15:38:15,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:57:26] 2025-10-11 15:38:15,759 | INFO     | ***************************************
[2025-10-11 17:57:26] 2025-10-11 15:38:15,759 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:57:26] 2025-10-11 15:38:15,759 | INFO     | ***************************************
[2025-10-11 17:57:26] 2025-10-11 15:38:15,759 | INFO     | 
[2025-10-11 17:57:26] 2025-10-11 15:38:15,762 | INFO     | architecture information:
[2025-10-11 17:57:26] 2025-10-11 15:38:15,762 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:57:26] 2025-10-11 15:38:15,774 | INFO     | cat /etc/os-release:
[2025-10-11 17:57:26] NAME="CentOS Linux"
[2025-10-11 17:57:26] VERSION="7 (Core)"
[2025-10-11 17:57:26] ID="centos"
[2025-10-11 17:57:26] ID_LIKE="rhel fedora"
[2025-10-11 17:57:26] VERSION_ID="7"
[2025-10-11 17:57:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:57:26] ANSI_COLOR="0;31"
[2025-10-11 17:57:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:57:26] HOME_URL="https://www.centos.org/"
[2025-10-11 17:57:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:57:26] 
[2025-10-11 17:57:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:57:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:57:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:57:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:57:26] 
[2025-10-11 17:57:26] 2025-10-11 15:38:15,774 | INFO     | ***************************************
[2025-10-11 17:57:26] 2025-10-11 15:38:16,277 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-11 17:57:26] 2025-10-11 15:38:16,291 | INFO     | sufficient remaining disk space (1678751301632 B)
[2025-10-11 17:57:26] 2025-10-11 15:38:16,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:57:26] 2025-10-11 15:38:16,291 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:57:26] 2025-10-11 15:38:16,291 | INFO     | update_server=False
[2025-10-11 17:57:26] 2025-10-11 15:38:16,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:57:26] 2025-10-11 15:38:16,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:57:26] 2025-10-11 15:38:16,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:57:26] 2025-10-11 15:38:16,793 | INFO     | aborting loop
[2025-10-11 17:57:26] 2025-10-11 15:38:16,832 | INFO     | all data control threads have been joined
[2025-10-11 17:57:26] 2025-10-11 15:38:16,959 | INFO     | all job control threads have been joined
[2025-10-11 17:57:26] 2025-10-11 15:38:17,076 | INFO     | all payload control threads have been joined
[2025-10-11 17:57:26] 2025-10-11 15:38:17,294 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:17,717 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:17,717 | INFO     | [job] validate thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:17,798 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:17,838 | INFO     | [data] control thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:17,951 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:17,964 | INFO     | [job] control thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:18,081 | INFO     | [payload] control thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:18,297 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:18,351 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:18,429 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:18,520 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:18,547 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:18,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:57:26] 2025-10-11 15:38:19,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:57:26] 2025-10-11 15:38:20,294 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:22,808 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:27,032 | INFO     | job.realtimelogging is not enabled
[2025-10-11 17:57:26] 2025-10-11 15:38:28,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:57:26] 2025-10-11 15:38:46,342 | INFO     | PID=1004348 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:57:26] 2025-10-11 15:38:46,342 | INFO     | .. there are 3 such processes running
[2025-10-11 17:57:26] 2025-10-11 15:38:46,342 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:57:26] 2025-10-11 15:38:46,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:57:26] 2025-10-11 15:38:46,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:57:26] 2025-10-11 15:39:08,498 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:57:26] 2025-10-11 15:39:09,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22988139927360)>', '<ExcThread(monitor, started 22987898054400)>']
[2025-10-11 17:57:26] 2025-10-11 15:39:10,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:57:26] 2025-10-11 15:39:10,450 | INFO     | [monitor] control thread has ended
[2025-10-11 17:57:26] 2025-10-11 15:39:14,976 | INFO     | all workflow threads have been joined
[2025-10-11 17:57:26] 2025-10-11 15:39:14,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:57:26] 2025-10-11 15:39:14,976 | INFO     | traces error code: 0
[2025-10-11 17:57:26] 2025-10-11 15:39:14,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:57:26] 2025-10-11 15:39:15,095 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:57:26] 2025-10-11 15:39:15,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:57:26] 2025-10-11 15:39:15,100 [wrapper] pilotpid: 1004348
[2025-10-11 17:57:26] 2025-10-11 15:39:15,102 [wrapper] Pilot exit status: 0
[2025-10-11 17:57:26] 2025-10-11 15:39:15,110 [wrapper] pandaids: 6837595249
[2025-10-11 17:57:26] 2025-10-11 15:39:15,160 [wrapper] cleanup supervisor_pilot 1224303 1004349
[2025-10-11 17:57:26] 2025-10-11 15:39:15,163 [wrapper] Test setup, not cleaning
[2025-10-11 17:57:26] 2025-10-11 15:39:15,166 [wrapper] apfmon messages muted
[2025-10-11 17:57:26] 2025-10-11 15:39:15,168 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:57:26] 2025-10-11 15:39:15,170 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:57:26]  *** Error codes and diagnostics ***
[2025-10-11 17:57:26]     "exeErrorCode": 0,
[2025-10-11 17:57:26]     "exeErrorDiag": "",
[2025-10-11 17:57:26]     "pilotErrorCode": 0,
[2025-10-11 17:57:26]     "pilotErrorDiag": "",
[2025-10-11 17:57:26]  *** Listing of results directory ***
[2025-10-11 17:57:26] total 414212
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc    557409 Oct 10 12:29 pilot3.tar.gz
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc      5112 Oct 10 12:45 queuedata.json
[2025-10-11 17:57:26] -rwx------ 1 boinc boinc     36292 Oct 10 12:47 runpilot2-wrapper.sh
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc       100 Oct 11 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:57:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 13:34 run_atlas
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc       105 Oct 11 13:34 job.xml
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc      6421 Oct 11 13:34 init_data.xml
[2025-10-11 17:57:26] -rw-r--r-- 2 boinc boinc 220974412 Oct 11 13:34 EVNT.46676267._001510.pool.root.1
[2025-10-11 17:57:26] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:34 start_atlas.sh
[2025-10-11 17:57:26] drwxrwx--x 2 boinc boinc      4096 Oct 11 13:34 shared
[2025-10-11 17:57:26] -rw-r--r-- 2 boinc boinc    569679 Oct 11 13:34 input.tar.gz
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc         0 Oct 11 13:34 boinc_lockfile
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc      2550 Oct 11 13:34 pandaJob.out
[2025-10-11 17:57:26] -rw------- 1 boinc boinc    975509 Oct 11 13:34 agis_schedconf.cvmfs.json
[2025-10-11 17:57:26] drwx------ 5 boinc boinc      4096 Oct 11 13:34 pilot3
[2025-10-11 17:57:26] -rw------- 1 boinc boinc 194327946 Oct 11 17:37 HITS.46676269._037171.pool.root.1
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc       528 Oct 11 17:37 boinc_task_state.xml
[2025-10-11 17:57:26] -rw------- 1 boinc boinc      1033 Oct 11 17:38 memory_monitor_summary.json
[2025-10-11 17:57:26] -rw------- 1 boinc boinc        95 Oct 11 17:38 pilot_heartbeat.json
[2025-10-11 17:57:26] -rw------- 1 boinc boinc   1560580 Oct 11 17:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:57:26] -rw------- 1 boinc boinc    407302 Oct 11 17:38 log.46676269._037171.job.log.tgz.1
[2025-10-11 17:57:26] -rw------- 1 boinc boinc      7829 Oct 11 17:38 heartbeat.json
[2025-10-11 17:57:26] -rw------- 1 boinc boinc      4906 Oct 11 17:39 pilotlog.txt
[2025-10-11 17:57:26] -rw------- 1 boinc boinc   2064685 Oct 11 17:39 log.46676269._037171.job.log.1
[2025-10-11 17:57:26] -rw------- 1 boinc boinc       357 Oct 11 17:39 output.list
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc       620 Oct 11 17:39 runtime_log
[2025-10-11 17:57:26] -rw------- 1 boinc boinc   2488320 Oct 11 17:39 result.tar.gz
[2025-10-11 17:57:26] -rw------- 1 boinc boinc       665 Oct 11 17:39 ugJMDmCqPR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmB8cNDmbkVd6m.diag
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc      9070 Oct 11 17:39 runtime_log.err
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc        26 Oct 11 17:57 wrapper_checkpoint.txt
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc      8192 Oct 11 17:57 boinc_mmap_file
[2025-10-11 17:57:26] -rw-r--r-- 1 boinc boinc     20902 Oct 11 17:57 stderr.txt
[2025-10-11 17:57:26] HITS file was successfully produced:
[2025-10-11 17:57:26] -rw------- 1 boinc boinc 194327946 Oct 11 17:37 shared/HITS.pool.root.1
[2025-10-11 17:57:26]  *** Contents of shared directory: ***
[2025-10-11 17:57:26] total 408588
[2025-10-11 17:57:26] -rw-r--r-- 2 boinc boinc 220974412 Oct 11 13:34 ATLAS.root_0
[2025-10-11 17:57:26] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:34 start_atlas.sh
[2025-10-11 17:57:26] -rw-r--r-- 2 boinc boinc    569679 Oct 11 13:34 input.tar.gz
[2025-10-11 17:57:26] -rw------- 1 boinc boinc 194327946 Oct 11 17:37 HITS.pool.root.1
[2025-10-11 17:57:26] -rw------- 1 boinc boinc   2488320 Oct 11 17:39 result.tar.gz
17:57:28 (996884): run_atlas exited; CPU time 56148.206143
17:57:28 (996884): called boinc_finish(0)

</stderr_txt>
]]>

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