Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:12:23 (489252): wrapper (7.7.26015): starting
06:12:23 (489252): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 06:12:23] Arguments: --nthreads 4
[2025-10-11 06:12:23] Threads: 4
[2025-10-11 06:12:23] Checking for CVMFS
[2025-10-11 06:12:23] No cvmfs_config command found, will try listing directly
[2025-10-11 06:12:23] CVMFS is ok
[2025-10-11 06:12:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:12:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:12:23] Further information can be found at the LHC@home message board.
[2025-10-11 06:12:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:12:23] Checking for apptainer binary...
[2025-10-11 06:12:23] which: no apptainer in ((null))
[2025-10-11 06:12:23] apptainer is not installed, using version from CVMFS
[2025-10-11 06:12:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:12:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-10-11 06:12:23] apptainer works
[2025-10-11 06:12:23] Set ATHENA_PROC_NUMBER=4
[2025-10-11 06:12:23] Set ATHENA_CORE_NUMBER=4
[2025-10-11 06:12:23] Starting ATLAS job with PandaID=6837595259
[2025-10-11 06:12:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:29:19]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:29:19] 2025-10-11 07:27:56,269 | INFO     | monitor loop #862: job 0:6837595259 is in state 'finished'
[2025-10-11 09:29:19] 2025-10-11 07:27:56,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:29:19] 2025-10-11 07:27:56,802 | INFO     | time since job start (11723s) is within the limit (172800.0s)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,126 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 09:29:19] 2025-10-11 07:27:58,133 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2575.83675
[2025-10-11 09:29:19] 2025-10-11 07:27:58,141 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6837595259/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,142 | INFO     | extracted standard info from prmon json
[2025-10-11 09:29:19] 2025-10-11 07:27:58,142 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:29:19] 2025-10-11 07:27:58,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:29:19] 2025-10-11 07:27:58,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:29:19] 2025-10-11 07:27:58,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:29:19] 2025-10-11 07:27:58,147 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:29:19] 2025-10-11 07:27:58,147 | INFO     | sum of square deviations: 2194675568.0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,149 | INFO     | sum of deviations: -20865277774.000004
[2025-10-11 09:29:19] 2025-10-11 07:27:58,149 | INFO     | mean x: 1760161803.5
[2025-10-11 09:29:19] 2025-10-11 07:27:58,149 | INFO     | mean y: 2388251.4583333335
[2025-10-11 09:29:19] 2025-10-11 07:27:58,149 | INFO     | -- intersect: 16736645238.098427
[2025-10-11 09:29:19] 2025-10-11 07:27:58,149 | INFO     | intersect: 16736645238.098427
[2025-10-11 09:29:19] 2025-10-11 07:27:58,150 | INFO     | chi2: 1.4916876617472155
[2025-10-11 09:29:19] 2025-10-11 07:27:58,150 | INFO     | sum of square deviations: 2027639878.0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,151 | INFO     | sum of deviations: -19876857381.000004
[2025-10-11 09:29:19] 2025-10-11 07:27:58,151 | INFO     | mean x: 1760161651.0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,152 | INFO     | mean y: 2389154.502673797
[2025-10-11 09:29:19] 2025-10-11 07:27:58,152 | INFO     | -- intersect: 17257170185.413383
[2025-10-11 09:29:19] 2025-10-11 07:27:58,152 | INFO     | intersect: 17257170185.413383
[2025-10-11 09:29:19] 2025-10-11 07:27:58,152 | INFO     | chi2: 1.4899715593254004
[2025-10-11 09:29:19] 2025-10-11 07:27:58,152 | INFO     | current chi2=1.4899715593254004 (change=0.11504435317276857 %)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,153 | INFO     | right removable region: 186
[2025-10-11 09:29:19] 2025-10-11 07:27:58,153 | INFO     | sum of square deviations: 2027639878.0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,154 | INFO     | sum of deviations: -45565618898.99998
[2025-10-11 09:29:19] 2025-10-11 07:27:58,154 | INFO     | mean x: 1760161956.0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,154 | INFO     | mean y: 2410495.35828877
[2025-10-11 09:29:19] 2025-10-11 07:27:58,155 | INFO     | -- intersect: 39557200158.85808
[2025-10-11 09:29:19] 2025-10-11 07:27:58,155 | INFO     | intersect: 39557200158.85808
[2025-10-11 09:29:19] 2025-10-11 07:27:58,155 | INFO     | chi2: 0.13609520539674236
[2025-10-11 09:29:19] 2025-10-11 07:27:58,155 | INFO     | current chi2=0.13609520539674236 (change=90.87642749304946 %)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,156 | INFO     | sum of square deviations: 1869302025.5
[2025-10-11 09:29:19] 2025-10-11 07:27:58,157 | INFO     | sum of deviations: -42811743551.49999
[2025-10-11 09:29:19] 2025-10-11 07:27:58,157 | INFO     | mean x: 1760162108.5
[2025-10-11 09:29:19] 2025-10-11 07:27:58,157 | INFO     | mean y: 2407817.653846154
[2025-10-11 09:29:19] 2025-10-11 07:27:58,157 | INFO     | -- intersect: 40314571272.360115
[2025-10-11 09:29:19] 2025-10-11 07:27:58,157 | INFO     | intersect: 40314571272.360115
[2025-10-11 09:29:19] 2025-10-11 07:27:58,158 | INFO     | chi2: 0.13197679143504326
[2025-10-11 09:29:19] 2025-10-11 07:27:58,158 | INFO     | current chi2=0.13197679143504326 (change=3.026127150984613 %)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,158 | INFO     | left removable region: 20
[2025-10-11 09:29:19] 2025-10-11 07:27:58,159 | INFO     | sum of square deviations: 1418361477.5
[2025-10-11 09:29:19] 2025-10-11 07:27:58,160 | INFO     | sum of deviations: -31098023839.499992
[2025-10-11 09:29:19] 2025-10-11 07:27:58,160 | INFO     | mean x: 1760162230.5
[2025-10-11 09:29:19] 2025-10-11 07:27:58,160 | INFO     | mean y: 2398485.9578313255
[2025-10-11 09:29:19] 2025-10-11 07:27:58,160 | INFO     | -- intersect: 38594511902.60023
[2025-10-11 09:29:19] 2025-10-11 07:27:58,160 | INFO     | intersect: 38594511902.60023
[2025-10-11 09:29:19] 2025-10-11 07:27:58,161 | INFO     | chi2: 0.11817135419445998
[2025-10-11 09:29:19] 2025-10-11 07:27:58,161 | INFO     | -- intersect: 38594511902.60023
[2025-10-11 09:29:19] 2025-10-11 07:27:58,161 | INFO     | current memory leak: -21.93 B/s (using 166 data points, chi2=0.12)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,161 | INFO     | could have reported an average CPU frequency of 2549 MHz (10 samples)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,162 | INFO     | ..............................
[2025-10-11 09:29:19] 2025-10-11 07:27:58,162 | INFO     | . Timing measurements:
[2025-10-11 09:29:19] 2025-10-11 07:27:58,162 | INFO     | . get job = 0 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,162 | INFO     | . initial setup = 1 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,162 | INFO     | . payload setup = 5 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,162 | INFO     | . stage-in = 0 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,162 | INFO     | . payload execution = 11691 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,163 | INFO     | . stage-out = 1 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,163 | INFO     | . log creation = 0 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,163 | INFO     | ..............................
[2025-10-11 09:29:19] 2025-10-11 07:27:58,310 | INFO     | 
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | job summary report
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | --------------------------------------------------
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | PanDA job id: 6837595259
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | task id: 46676269
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | errors: (none)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | pilot state: finished 
[2025-10-11 09:29:19] 2025-10-11 07:27:58,311 | INFO     | transexitcode: 0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | exeerrorcode: 0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | exeerrordiag: 
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | exitcode: 0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | exitmsg: OK
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | cpuconsumptiontime: 44701 s
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | nevents: 400
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | neventsw: 0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,312 | INFO     | pid: 499665
[2025-10-11 09:29:19] 2025-10-11 07:27:58,313 | INFO     | pgrp: 499665
[2025-10-11 09:29:19] 2025-10-11 07:27:58,313 | INFO     | corecount: 4
[2025-10-11 09:29:19] 2025-10-11 07:27:58,313 | INFO     | event service: False
[2025-10-11 09:29:19] 2025-10-11 07:27:58,313 | INFO     | sizes: {0: 2348641, 1: 2348896, 5: 2349158, 12: 2349214, 11701: 2378717, 11702: 2387737, 11704: 2387921, 11710: 2388115}
[2025-10-11 09:29:19] 2025-10-11 07:27:58,313 | INFO     | --------------------------------------------------
[2025-10-11 09:29:19] 2025-10-11 07:27:58,313 | INFO     | 
[2025-10-11 09:29:19] 2025-10-11 07:27:58,313 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-11 09:29:19] 2025-10-11 07:27:58,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:29:19] 2025-10-11 07:27:58,337 | INFO     | job 6837595259 has completed (purged errors)
[2025-10-11 09:29:19] 2025-10-11 07:27:58,337 | INFO     | overall cleanup function is called
[2025-10-11 09:29:19] 2025-10-11 07:27:59,346 | INFO     | --- collectZombieJob: --- 10, [499665]
[2025-10-11 09:29:19] 2025-10-11 07:27:59,346 | INFO     | zombie collector waiting for pid 499665
[2025-10-11 09:29:19] 2025-10-11 07:27:59,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:29:19] 2025-10-11 07:27:59,346 | INFO     | collected zombie processes
[2025-10-11 09:29:19] 2025-10-11 07:27:59,346 | INFO     | will attempt to kill all subprocesses of pid=499665
[2025-10-11 09:29:19] 2025-10-11 07:27:59,632 | INFO     | process IDs to be killed: [499665] (in reverse order)
[2025-10-11 09:29:19] 2025-10-11 07:27:59,707 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:29:19] 2025-10-11 07:27:59,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:29:19] 2025-10-11 07:27:59,715 | INFO     | did not find any defunct processes belonging to 499665
[2025-10-11 09:29:19] 2025-10-11 07:27:59,723 | INFO     | did not find any defunct processes belonging to 499665
[2025-10-11 09:29:19] 2025-10-11 07:27:59,723 | INFO     | ready for new job
[2025-10-11 09:29:19] 2025-10-11 07:27:59,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:29:19] 2025-10-11 07:27:59,725 | INFO     | ***************************************
[2025-10-11 09:29:19] 2025-10-11 07:27:59,726 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:29:19] 2025-10-11 07:27:59,726 | INFO     | ***************************************
[2025-10-11 09:29:19] 2025-10-11 07:27:59,726 | INFO     | 
[2025-10-11 09:29:19] 2025-10-11 07:27:59,728 | INFO     | architecture information:
[2025-10-11 09:29:19] 2025-10-11 07:27:59,729 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:29:19] 2025-10-11 07:27:59,743 | INFO     | cat /etc/os-release:
[2025-10-11 09:29:19] NAME="CentOS Linux"
[2025-10-11 09:29:19] VERSION="7 (Core)"
[2025-10-11 09:29:19] ID="centos"
[2025-10-11 09:29:19] ID_LIKE="rhel fedora"
[2025-10-11 09:29:19] VERSION_ID="7"
[2025-10-11 09:29:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:29:19] ANSI_COLOR="0;31"
[2025-10-11 09:29:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:29:19] HOME_URL="https://www.centos.org/"
[2025-10-11 09:29:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:29:19] 
[2025-10-11 09:29:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:29:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:29:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:29:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:29:19] 
[2025-10-11 09:29:19] 2025-10-11 07:27:59,743 | INFO     | ***************************************
[2025-10-11 09:29:19] 2025-10-11 07:28:00,246 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-11 09:29:19] 2025-10-11 07:28:00,259 | INFO     | sufficient remaining disk space (1679534587904 B)
[2025-10-11 09:29:19] 2025-10-11 07:28:00,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:29:19] 2025-10-11 07:28:00,260 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:29:19] 2025-10-11 07:28:00,260 | INFO     | update_server=False
[2025-10-11 09:29:19] 2025-10-11 07:28:00,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:29:19] 2025-10-11 07:28:00,260 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:29:19] 2025-10-11 07:28:00,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:29:19] 2025-10-11 07:28:00,261 | INFO     | aborting loop
[2025-10-11 09:29:19] 2025-10-11 07:28:00,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:29:19] 2025-10-11 07:28:00,772 | INFO     | all data control threads have been joined
[2025-10-11 09:29:19] 2025-10-11 07:28:00,879 | INFO     | all job control threads have been joined
[2025-10-11 09:29:19] 2025-10-11 07:28:01,039 | INFO     | all payload control threads have been joined
[2025-10-11 09:29:19] 2025-10-11 07:28:01,262 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,265 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,266 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,377 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,491 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,555 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,778 | INFO     | [data] control thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,839 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:01,884 | INFO     | [job] control thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:02,044 | INFO     | [payload] control thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:02,593 | INFO     | [job] validate thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:02,620 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:02,712 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:02,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:29:19] 2025-10-11 07:28:02,780 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:06,725 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:29:19] 2025-10-11 07:28:30,213 | INFO     | PID=492928 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 09:29:19] 2025-10-11 07:28:30,213 | INFO     | .. there are 5 such processes running
[2025-10-11 09:29:19] 2025-10-11 07:28:30,214 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:29:19] 2025-10-11 07:28:30,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:29:19] 2025-10-11 07:28:30,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:29:19] 2025-10-11 07:28:51,447 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:29:19] 2025-10-11 07:28:53,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23177112188736)>', '<ExcThread(monitor, started 23176874526464)>']
[2025-10-11 09:29:19] 2025-10-11 07:28:53,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:29:19] 2025-10-11 07:28:53,324 | INFO     | [monitor] control thread has ended
[2025-10-11 09:29:19] 2025-10-11 07:28:58,032 | INFO     | all workflow threads have been joined
[2025-10-11 09:29:19] 2025-10-11 07:28:58,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:29:19] 2025-10-11 07:28:58,033 | INFO     | traces error code: 0
[2025-10-11 09:29:19] 2025-10-11 07:28:58,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:29:19] 2025-10-11 07:28:58,139 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:29:19] 2025-10-11 07:28:58,142 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:29:19] 2025-10-11 07:28:58,144 [wrapper] pilotpid: 492928
[2025-10-11 09:29:19] 2025-10-11 07:28:58,146 [wrapper] Pilot exit status: 0
[2025-10-11 09:29:19] 2025-10-11 07:28:58,155 [wrapper] pandaids: 6837595259
[2025-10-11 09:29:19] 2025-10-11 07:28:58,204 [wrapper] cleanup supervisor_pilot  735636 492929
[2025-10-11 09:29:19] 2025-10-11 07:28:58,207 [wrapper] Test setup, not cleaning
[2025-10-11 09:29:19] 2025-10-11 07:28:58,209 [wrapper] apfmon messages muted
[2025-10-11 09:29:19] 2025-10-11 07:28:58,212 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:29:19] 2025-10-11 07:28:58,214 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:29:19]  *** Error codes and diagnostics ***
[2025-10-11 09:29:19]     "exeErrorCode": 0,
[2025-10-11 09:29:19]     "exeErrorDiag": "",
[2025-10-11 09:29:19]     "pilotErrorCode": 0,
[2025-10-11 09:29:19]     "pilotErrorDiag": "",
[2025-10-11 09:29:19]  *** Listing of results directory ***
[2025-10-11 09:29:19] total 411008
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc    557409 Oct 10 12:29 pilot3.tar.gz
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc      5112 Oct 10 12:45 queuedata.json
[2025-10-11 09:29:19] -rwx------ 1 boinc boinc     36292 Oct 10 12:47 runpilot2-wrapper.sh
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc       100 Oct 11 06:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:29:19] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 06:12 run_atlas
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc       105 Oct 11 06:12 job.xml
[2025-10-11 09:29:19] -rw-r--r-- 2 boinc boinc 220974412 Oct 11 06:12 EVNT.46676267._001510.pool.root.1
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc      6421 Oct 11 06:12 init_data.xml
[2025-10-11 09:29:19] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:12 start_atlas.sh
[2025-10-11 09:29:19] drwxrwx--x 2 boinc boinc      4096 Oct 11 06:12 shared
[2025-10-11 09:29:19] -rw-r--r-- 2 boinc boinc    569683 Oct 11 06:12 input.tar.gz
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:12 boinc_lockfile
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc      2550 Oct 11 06:12 pandaJob.out
[2025-10-11 09:29:19] -rw------- 1 boinc boinc    975509 Oct 11 06:12 agis_schedconf.cvmfs.json
[2025-10-11 09:29:19] drwx------ 5 boinc boinc      4096 Oct 11 06:12 pilot3
[2025-10-11 09:29:19] -rw------- 1 boinc boinc 191891397 Oct 11 09:27 HITS.46676269._037181.pool.root.1
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc       530 Oct 11 09:27 boinc_task_state.xml
[2025-10-11 09:29:19] -rw------- 1 boinc boinc      1034 Oct 11 09:27 memory_monitor_summary.json
[2025-10-11 09:29:19] -rw------- 1 boinc boinc   1560580 Oct 11 09:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:29:19] -rw------- 1 boinc boinc    378041 Oct 11 09:27 log.46676269._037181.job.log.tgz.1
[2025-10-11 09:29:19] -rw------- 1 boinc boinc      7838 Oct 11 09:27 heartbeat.json
[2025-10-11 09:29:19] -rw------- 1 boinc boinc        95 Oct 11 09:28 pilot_heartbeat.json
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc        27 Oct 11 09:28 wrapper_checkpoint.txt
[2025-10-11 09:29:19] -rw------- 1 boinc boinc      4833 Oct 11 09:28 pilotlog.txt
[2025-10-11 09:29:19] -rw------- 1 boinc boinc   1671240 Oct 11 09:28 log.46676269._037181.job.log.1
[2025-10-11 09:29:19] -rw------- 1 boinc boinc       357 Oct 11 09:28 output.list
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc       620 Oct 11 09:28 runtime_log
[2025-10-11 09:29:19] -rw------- 1 boinc boinc   2068480 Oct 11 09:28 result.tar.gz
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc      9070 Oct 11 09:28 runtime_log.err
[2025-10-11 09:29:19] -rw------- 1 boinc boinc       664 Oct 11 09:28 XUuLDmbpPR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmunPMDmBHEZln.diag
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc      8192 Oct 11 09:29 boinc_mmap_file
[2025-10-11 09:29:19] -rw-r--r-- 1 boinc boinc     20921 Oct 11 09:29 stderr.txt
[2025-10-11 09:29:19] HITS file was successfully produced:
[2025-10-11 09:29:19] -rw------- 1 boinc boinc 191891397 Oct 11 09:27 shared/HITS.pool.root.1
[2025-10-11 09:29:19]  *** Contents of shared directory: ***
[2025-10-11 09:29:19] total 405796
[2025-10-11 09:29:19] -rw-r--r-- 2 boinc boinc 220974412 Oct 11 06:12 ATLAS.root_0
[2025-10-11 09:29:19] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:12 start_atlas.sh
[2025-10-11 09:29:19] -rw-r--r-- 2 boinc boinc    569683 Oct 11 06:12 input.tar.gz
[2025-10-11 09:29:19] -rw------- 1 boinc boinc 191891397 Oct 11 09:27 HITS.pool.root.1
[2025-10-11 09:29:19] -rw------- 1 boinc boinc   2068480 Oct 11 09:28 result.tar.gz
09:29:21 (489252): run_atlas exited; CPU time 45084.827508
09:29:21 (489252): called boinc_finish(0)

</stderr_txt>
]]>

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