Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 17:14:17 (2058253): vboxwrapper version 26210
2025-10-10 17:14:17 (2058253): BOINC client version: 8.2.4
2025-10-10 17:14:17 (2058253): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-10 17:14:17 (2058253): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 17:14:17 (2058253): Create VM. (boinc_3fc9a4e7e12a84f3, slot#0)
2025-10-10 17:14:18 (2058253): Setting Memory Size for VM. (4800MB)
2025-10-10 17:14:18 (2058253): Setting CPU Count for VM. (8)
2025-10-10 17:14:18 (2058253): Setting Chipset Options for VM.
2025-10-10 17:14:18 (2058253): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 17:14:18 (2058253): Setting Boot Options for VM.
2025-10-10 17:14:19 (2058253): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 17:14:19 (2058253): Enabling VM Network Access.
2025-10-10 17:14:19 (2058253): Disabling USB Support for VM.
2025-10-10 17:14:19 (2058253): Disabling COM Port Support for VM.
2025-10-10 17:14:19 (2058253): Disabling LPT Port Support for VM.
2025-10-10 17:14:19 (2058253): Disabling Audio Support for VM.
2025-10-10 17:14:19 (2058253): Disabling Clipboard Support for VM.
2025-10-10 17:14:19 (2058253): Disabling Drag and Drop Support for VM.
2025-10-10 17:14:20 (2058253): Adding storage controller(s) to VM.
2025-10-10 17:14:20 (2058253): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 17:14:21 (2058253): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 17:14:21 (2058253): forwarding host port 34299 to guest port 80
2025-10-10 17:14:21 (2058253): Enabling remote desktop for VM.
2025-10-10 17:14:21 (2058253): Enabling shared directory for VM.
2025-10-10 17:14:21 (2058253): Starting VM using VBoxManage interface. (boinc_3fc9a4e7e12a84f3, slot#0)
2025-10-10 17:14:22 (2058253): Successfully started VM. (PID = '2058745')
2025-10-10 17:14:22 (2058253): Reporting VM Process ID to BOINC.
2025-10-10 17:14:22 (2058253): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-10 17:14:22 (2058253): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 17:14:22 (2058253): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 17:14:22 (2058253): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 17:14:22 (2058253): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 17:14:22 (2058253): Detected: Web Application Enabled (http://localhost:34299)
2025-10-10 17:14:22 (2058253): Detected: Remote Desktop Enabled (localhost:33517)
2025-10-10 17:14:22 (2058253): Preference change detected
2025-10-10 17:14:22 (2058253): Setting CPU throttle for VM. (80%)
2025-10-10 17:14:22 (2058253): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 17:14:24 (2058253): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 17:14:24 (2058253): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 17:14:27 (2058253): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 17:14:27 (2058253): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 17:14:27 (2058253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 17:14:34 (2058253): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 17:14:34 (2058253): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 17:14:47 (2058253): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000151 main     Log opened 2025-10-10T15:14:45.600313000Z
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000249 main     OS Product: Linux
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000265 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000276 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000288 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000288 main     Process ID: 1360
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000288 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 17:14:47 (2058253): Guest Log: 00:00:00.000770 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 17:14:48 (2058253): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 17:14:48 (2058253): Guest Log: [INFO] Mounting shared directory
2025-10-10 17:14:48 (2058253): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 17:15:03 (2058253): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 09:30:00 (2058253): Preference change detected
2025-10-11 09:30:00 (2058253): Setting CPU throttle for VM. (80%)
2025-10-11 09:30:01 (2058253): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 09:30:01 (2058253): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 09:30:05 (2058253): Guest Log: 00:00:20.010182 timesync vgsvcTimeSyncWorker: Radical host time change: 58 508 265 000 000ns (HostNow=1 760 167 805 352 000 000 ns HostLast=1 760 109 297 087 000 000 ns)
2025-10-11 09:30:08 (2058253): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 09:30:08 (2058253): Guest Log: [INFO] Detected branch: prod
2025-10-11 09:30:08 (2058253): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 09:30:08 (2058253): Guest Log: Copying input files
2025-10-11 09:30:08 (2058253): Guest Log: Copied input files into RunAtlas.
2025-10-11 09:30:08 (2058253): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 09:30:08 (2058253): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 09:30:08 (2058253): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 09:30:08 (2058253): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 09:30:15 (2058253): Guest Log: 00:00:30.014448 timesync vgsvcTimeSyncWorker: Radical guest time change: 58 509 746 296 000ns (GuestNow=1 760 167 815 356 307 000 ns GuestLast=1 760 109 305 610 011 000 ns fSetTimeLastLoop=true )
2025-10-11 09:31:06 (2058253): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 09:31:06 (2058253): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 09:31:06 (2058253): Guest Log: 2.6.3.0 1665 1 30160 151576 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 09:31:09 (2058253): Guest Log: copied the webapp to /var/www
2025-10-11 09:31:09 (2058253): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-11 09:31:09 (2058253): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-11 09:31:09 (2058253): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 09:31:09 (2058253): Guest Log:  *** Starting ATLAS job. (PandaID=6837398733 taskID=46676269) ***
2025-10-11 10:28:41 (2058253): Guest Log:  *** Job finished ***
2025-10-11 10:28:41 (2058253): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:00,945 | INFO     | [payload] failed_post thread has finished
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:04,795 | INFO     | [data] queue_monitor thread has finished
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:34,339 | INFO     | [monitor] cgroup control has ended
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:35,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655991461696)>', '<ExcThread(monitor, started 140655238031104)>']
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:35,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:35,668 | INFO     | [monitor] control thread has ended
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,194 | INFO     | all workflow threads have been joined
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,194 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,194 | INFO     | traces error code: 0
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,273 [wrapper] ==== pilot stdout END ====
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,276 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,279 [wrapper] pilotpid: 6105
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,281 [wrapper] Pilot exit status: 0
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,325 [wrapper] pandaids: 6837398733
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,348 [wrapper] cleanup supervisor_pilot 22131 6106
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,351 [wrapper] Test setup, not cleaning
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,354 [wrapper] apfmon messages muted
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,358 [wrapper] ==== wrapper stdout END ====
2025-10-11 10:28:41 (2058253): Guest Log: 2025-10-11 08:28:40,360 [wrapper] ==== wrapper stderr END ====
2025-10-11 10:28:41 (2058253): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 10:28:41 (2058253): Guest Log:     "exeErrorCode": 0,
2025-10-11 10:28:41 (2058253): Guest Log:     "exeErrorDiag": "",
2025-10-11 10:28:41 (2058253): Guest Log:     "pilotErrorCode": 0,
2025-10-11 10:28:41 (2058253): Guest Log:     "pilotErrorDiag": "",
2025-10-11 10:28:41 (2058253): Guest Log:  *** Listing of results directory ***
2025-10-11 10:28:41 (2058253): Guest Log: total 200036
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 02:47 pilot3.tar.gz
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 03:05 queuedata.json
2025-10-11 10:28:41 (2058253): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 03:08 runpilot2-wrapper.sh
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 11 07:30 start_atlas.sh
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas    569682 Oct 11 07:30 input.tar.gz
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas      6338 Oct 11 07:30 init_data.xml
2025-10-11 10:28:41 (2058253): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 07:30 EVNT.46676267._001270.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct 11 07:31 pandaJob.out
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas    975525 Oct 11 07:31 agis_schedconf.cvmfs.json
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 07:31 agis_ddmendpoints.agis.ALL.json
2025-10-11 10:28:41 (2058253): Guest Log: drwx------. 5 atlas atlas      4096 Oct 11 07:31 pilot3
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 08:27 pilot_heartbeat.json
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas 199442814 Oct 11 08:27 HITS.46676269._031144.pool.root.1
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas      1027 Oct 11 08:27 memory_monitor_summary.json
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas    292525 Oct 11 08:27 log.46676269._031144.job.log.tgz.1
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas      7783 Oct 11 08:27 heartbeat.json
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 11 08:28 pilotlog.txt
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas    487492 Oct 11 08:28 log.46676269._031144.job.log.1
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 08:28 output.list
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 08:28 runtime_log
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas    798720 Oct 11 08:28 result.tar.gz
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas       657 Oct 11 08:28 YjCLDm3fIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeEPMDmZpceFn.diag
2025-10-11 10:28:41 (2058253): Guest Log: -rw-r--r--. 1 atlas atlas      8651 Oct 11 08:28 runtime_log.err
2025-10-11 10:28:41 (2058253): Guest Log: Looking for outputfile HITS.46676269._031144.pool.root.1
2025-10-11 10:28:41 (2058253): Guest Log: HITS file was successfully produced
2025-10-11 10:28:41 (2058253): Guest Log: -rw-------. 1 atlas atlas 199442814 Oct 11 08:27 /home/atlas/RunAtlas/HITS.46676269._031144.pool.root.1
2025-10-11 10:28:41 (2058253): Guest Log: Successfully finished the ATLAS job!
2025-10-11 10:28:41 (2058253): Guest Log: Copying the results back to the shared directory!
2025-10-11 10:28:42 (2058253): Guest Log:  *** Contents of shared directory: ***
2025-10-11 10:28:42 (2058253): Guest Log: total 215976
2025-10-11 10:28:42 (2058253): Guest Log: -rw-r--r--. 1 root root 219761834 Oct 10 15:14 ATLAS.root_0
2025-10-11 10:28:42 (2058253): Guest Log: -rw-r--r--. 1 root root      6338 Oct 10 15:14 init_data.xml
2025-10-11 10:28:42 (2058253): Guest Log: -rw-r--r--. 1 root root    569682 Oct 10 15:14 input.tar.gz
2025-10-11 10:28:42 (2058253): Guest Log: -rw-r--r--. 1 root root    798720 Oct 11  2025 result.tar.gz
2025-10-11 10:28:42 (2058253): Guest Log: -rw-r--r--. 1 root root     15120 Oct 10 15:14 start_atlas.sh
2025-10-11 10:28:42 (2058253): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 10:28:42 (2058253): VM Completion File Detected.
2025-10-11 10:28:42 (2058253): Powering off VM.
2025-10-11 10:28:42 (2058253): Successfully stopped VM.
2025-10-11 10:28:42 (2058253): Deregistering VM. (boinc_3fc9a4e7e12a84f3, slot#0)
2025-10-11 10:28:42 (2058253): Removing network bandwidth throttle group from VM.
2025-10-11 10:28:42 (2058253): Removing VM from VirtualBox.
2025-10-11 10:28:48 (2058253): called boinc_finish(0)

</stderr_txt>
]]>

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