Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:15 (460565): wrapper (7.7.26015): starting
10:04:15 (460565): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 10:04:15] Arguments: --nthreads 9
[2025-10-10 10:04:15] Threads: 9
[2025-10-10 10:04:15] Checking for CVMFS
[2025-10-10 10:04:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:04:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:04:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:04:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:04:16] 2.13.2.0 2126255 4296 150248 151547 1 557 38768588 40960001 17843 16776704 0 9115465 99.709 9690538 39249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 10:04:16] CVMFS is ok
[2025-10-10 10:04:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:04:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:04:16] Further information can be found at the LHC@home message board.
[2025-10-10 10:04:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:04:16] Checking for apptainer binary...
[2025-10-10 10:04:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:04:16] Running /usr/bin/apptainer --version
[2025-10-10 10:04:16] apptainer version 1.4.3-1.el9
[2025-10-10 10:04:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:04:16] c6-8-12-3.aglt2.org
[2025-10-10 10:04:16] apptainer works
[2025-10-10 10:04:16] Set ATHENA_PROC_NUMBER=9
[2025-10-10 10:04:16] Set ATHENA_CORE_NUMBER=9
[2025-10-10 10:04:16] Starting ATLAS job with PandaID=6837399390
[2025-10-10 10:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:44:09]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:44:09] 2025-10-10 17:43:26,275 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:44:09] 2025-10-10 17:43:26,276 | INFO     | sum of square deviations: 3038847627.2570157
[2025-10-10 13:44:09] 2025-10-10 17:43:26,277 | INFO     | sum of deviations: 3144326894.925228
[2025-10-10 13:44:09] 2025-10-10 17:43:26,277 | INFO     | mean x: 1760111605.6962616
[2025-10-10 13:44:09] 2025-10-10 17:43:26,277 | INFO     | mean y: 2161452.9065420562
[2025-10-10 13:44:09] 2025-10-10 17:43:26,277 | INFO     | -- intersect: -1819044128.5185199
[2025-10-10 13:44:09] 2025-10-10 17:43:26,277 | INFO     | intersect: -1819044128.5185199
[2025-10-10 13:44:09] 2025-10-10 17:43:26,278 | INFO     | chi2: 2.3569594836225325
[2025-10-10 13:44:09] 2025-10-10 17:43:26,278 | INFO     | sum of square deviations: 2830778608.956949
[2025-10-10 13:44:09] 2025-10-10 17:43:26,286 | INFO     | sum of deviations: 17291285573.980854
[2025-10-10 13:44:09] 2025-10-10 17:43:26,286 | INFO     | mean x: 1760111453.1961722
[2025-10-10 13:44:09] 2025-10-10 17:43:26,287 | INFO     | mean y: 2171675.976076555
[2025-10-10 13:44:09] 2025-10-10 17:43:26,287 | INFO     | -- intersect: -10749142355.771399
[2025-10-10 13:44:09] 2025-10-10 17:43:26,287 | INFO     | intersect: -10749142355.771399
[2025-10-10 13:44:09] 2025-10-10 17:43:26,287 | INFO     | chi2: 1.6820121658986047
[2025-10-10 13:44:09] 2025-10-10 17:43:26,287 | INFO     | current chi2=1.6820121658986047 (change=28.636356391097845 %)
[2025-10-10 13:44:09] 2025-10-10 17:43:26,287 | INFO     | sum of square deviations: 2632443208.759801
[2025-10-10 13:44:09] 2025-10-10 17:43:26,288 | INFO     | sum of deviations: 16813499192.18629
[2025-10-10 13:44:09] 2025-10-10 17:43:26,289 | INFO     | mean x: 1760111300.7009804
[2025-10-10 13:44:09] 2025-10-10 17:43:26,289 | INFO     | mean y: 2171293.068627451
[2025-10-10 13:44:09] 2025-10-10 17:43:26,289 | INFO     | -- intersect: -11239716028.191408
[2025-10-10 13:44:09] 2025-10-10 17:43:26,289 | INFO     | intersect: -11239716028.191408
[2025-10-10 13:44:09] 2025-10-10 17:43:26,289 | INFO     | chi2: 1.6795883066131228
[2025-10-10 13:44:09] 2025-10-10 17:43:26,289 | INFO     | current chi2=1.6795883066131228 (change=0.14410474160791886 %)
[2025-10-10 13:44:09] 2025-10-10 17:43:26,289 | INFO     | right removable region: 203
[2025-10-10 13:44:09] 2025-10-10 17:43:26,298 | INFO     | sum of square deviations: 2830765799.5598035
[2025-10-10 13:44:09] 2025-10-10 17:43:26,299 | INFO     | sum of deviations: -29186434767.72728
[2025-10-10 13:44:09] 2025-10-10 17:43:26,299 | INFO     | mean x: 1760111758.2009568
[2025-10-10 13:44:09] 2025-10-10 17:43:26,299 | INFO     | mean y: 2184958.6363636362
[2025-10-10 13:44:09] 2025-10-10 17:43:26,299 | INFO     | -- intersect: 18149707803.030796
[2025-10-10 13:44:09] 2025-10-10 17:43:26,299 | INFO     | intersect: 18149707803.030796
[2025-10-10 13:44:09] 2025-10-10 17:43:26,300 | INFO     | chi2: 0.7877884632637919
[2025-10-10 13:44:09] 2025-10-10 17:43:26,300 | INFO     | current chi2=0.7877884632637919 (change=66.57607104671145 %)
[2025-10-10 13:44:09] 2025-10-10 17:43:26,301 | INFO     | sum of square deviations: 2632405084.352937
[2025-10-10 13:44:09] 2025-10-10 17:43:26,310 | INFO     | sum of deviations: -30553021462.176468
[2025-10-10 13:44:09] 2025-10-10 17:43:26,310 | INFO     | mean x: 1760111910.7058823
[2025-10-10 13:44:09] 2025-10-10 17:43:26,310 | INFO     | mean y: 2185985.56372549
[2025-10-10 13:44:09] 2025-10-10 17:43:26,311 | INFO     | -- intersect: 20430932800.892086
[2025-10-10 13:44:09] 2025-10-10 17:43:26,311 | INFO     | intersect: 20430932800.892086
[2025-10-10 13:44:09] 2025-10-10 17:43:26,311 | INFO     | chi2: 0.771742360187768
[2025-10-10 13:44:09] 2025-10-10 17:43:26,311 | INFO     | current chi2=0.771742360187768 (change=2.0368542856727374 %)
[2025-10-10 13:44:09] 2025-10-10 17:43:26,311 | INFO     | left removable region: 20
[2025-10-10 13:44:09] 2025-10-10 17:43:26,311 | INFO     | sum of square deviations: 1900264232.6885214
[2025-10-10 13:44:09] 2025-10-10 17:43:26,312 | INFO     | sum of deviations: -12561927660.180302
[2025-10-10 13:44:09] 2025-10-10 17:43:26,312 | INFO     | mean x: 1760111880.2131147
[2025-10-10 13:44:09] 2025-10-10 17:43:26,312 | INFO     | mean y: 2194560.4918032787
[2025-10-10 13:44:09] 2025-10-10 17:43:26,312 | INFO     | -- intersect: 11637628061.115541
[2025-10-10 13:44:09] 2025-10-10 17:43:26,312 | INFO     | intersect: 11637628061.115541
[2025-10-10 13:44:09] 2025-10-10 17:43:26,313 | INFO     | chi2: 0.07643986099339196
[2025-10-10 13:44:09] 2025-10-10 17:43:26,313 | INFO     | -- intersect: 11637628061.115541
[2025-10-10 13:44:09] 2025-10-10 17:43:26,313 | INFO     | current memory leak: -6.61 B/s (using 183 data points, chi2=0.08)
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | could have reported an average CPU frequency of 2911 MHz (11 samples)
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | ..............................
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | . Timing measurements:
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | . get job = 0 s
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | . initial setup = 2 s
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | . payload setup = 8 s
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | . stage-in = 0 s
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | . payload execution = 13053 s
[2025-10-10 13:44:09] 2025-10-10 17:43:26,322 | INFO     | . stage-out = 6 s
[2025-10-10 13:44:09] 2025-10-10 17:43:26,323 | INFO     | . log creation = 0 s
[2025-10-10 13:44:09] 2025-10-10 17:43:26,323 | INFO     | ..............................
[2025-10-10 13:44:09] 2025-10-10 17:43:27,472 | INFO     | time since job start (13131s) is within the limit (172800.0s)
[2025-10-10 13:44:09] 2025-10-10 17:43:27,487 | INFO     | 
[2025-10-10 13:44:09] 2025-10-10 17:43:27,487 | INFO     | job summary report
[2025-10-10 13:44:09] 2025-10-10 17:43:27,487 | INFO     | --------------------------------------------------
[2025-10-10 13:44:09] 2025-10-10 17:43:27,487 | INFO     | PanDA job id: 6837399390
[2025-10-10 13:44:09] 2025-10-10 17:43:27,487 | INFO     | task id: 46676269
[2025-10-10 13:44:09] 2025-10-10 17:43:27,487 | INFO     | errors: (none)
[2025-10-10 13:44:09] 2025-10-10 17:43:27,487 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | pilot state: finished 
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | transexitcode: 0
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | exeerrorcode: 0
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | exeerrordiag: 
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | exitcode: 0
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | exitmsg: OK
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | cpuconsumptiontime: 42556 s
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | nevents: 400
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | neventsw: 0
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | pid: 471352
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | pgrp: 471352
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | corecount: 9
[2025-10-10 13:44:09] 2025-10-10 17:43:27,488 | INFO     | event service: False
[2025-10-10 13:44:09] 2025-10-10 17:43:27,489 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 13067: 2379181, 13074: 2388179, 13075: 2388235, 13114: 2388557}
[2025-10-10 13:44:09] 2025-10-10 17:43:27,489 | INFO     | --------------------------------------------------
[2025-10-10 13:44:09] 2025-10-10 17:43:27,489 | INFO     | 
[2025-10-10 13:44:09] 2025-10-10 17:43:27,489 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 13:44:09] 2025-10-10 17:43:27,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:44:09] 2025-10-10 17:43:27,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:44:09] 2025-10-10 17:43:27,752 | INFO     | job 6837399390 has completed (purged errors)
[2025-10-10 13:44:09] 2025-10-10 17:43:27,752 | INFO     | overall cleanup function is called
[2025-10-10 13:44:09] 2025-10-10 17:43:28,895 | INFO     | --- collectZombieJob: --- 10, [471352]
[2025-10-10 13:44:09] 2025-10-10 17:43:28,895 | INFO     | zombie collector waiting for pid 471352
[2025-10-10 13:44:09] 2025-10-10 17:43:28,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:44:09] 2025-10-10 17:43:28,895 | INFO     | collected zombie processes
[2025-10-10 13:44:09] 2025-10-10 17:43:28,895 | INFO     | will attempt to kill all subprocesses of pid=471352
[2025-10-10 13:44:09] 2025-10-10 17:43:34,328 | INFO     | PID=464770 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 13:44:09] 2025-10-10 17:43:34,339 | INFO     | .. there are 22 such processes running
[2025-10-10 13:44:09] 2025-10-10 17:43:34,454 | INFO     | process IDs to be killed: [471352] (in reverse order)
[2025-10-10 13:44:09] 2025-10-10 17:43:35,676 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:44:09] 2025-10-10 17:43:35,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:44:09] 2025-10-10 17:43:35,739 | INFO     | did not find any defunct processes belonging to 471352
[2025-10-10 13:44:09] 2025-10-10 17:43:35,828 | INFO     | did not find any defunct processes belonging to 471352
[2025-10-10 13:44:09] 2025-10-10 17:43:35,828 | INFO     | ready for new job
[2025-10-10 13:44:09] 2025-10-10 17:43:35,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:44:09] 2025-10-10 17:43:35,846 | INFO     | ***************************************
[2025-10-10 13:44:09] 2025-10-10 17:43:35,846 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:44:09] 2025-10-10 17:43:35,847 | INFO     | ***************************************
[2025-10-10 13:44:09] 2025-10-10 17:43:35,847 | INFO     | 
[2025-10-10 13:44:09] 2025-10-10 17:43:35,866 | INFO     | architecture information:
[2025-10-10 13:44:09] 2025-10-10 17:43:35,878 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:44:09] 2025-10-10 17:43:35,930 | INFO     | cat /etc/os-release:
[2025-10-10 13:44:09] NAME="CentOS Linux"
[2025-10-10 13:44:09] VERSION="7 (Core)"
[2025-10-10 13:44:09] ID="centos"
[2025-10-10 13:44:09] ID_LIKE="rhel fedora"
[2025-10-10 13:44:09] VERSION_ID="7"
[2025-10-10 13:44:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:44:09] ANSI_COLOR="0;31"
[2025-10-10 13:44:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:44:09] HOME_URL="https://www.centos.org/"
[2025-10-10 13:44:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:44:09] 
[2025-10-10 13:44:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:44:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:44:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:44:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:44:09] 
[2025-10-10 13:44:09] 2025-10-10 17:43:35,930 | INFO     | ***************************************
[2025-10-10 13:44:09] 2025-10-10 17:43:36,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 13:44:09] 2025-10-10 17:43:36,496 | INFO     | sufficient remaining disk space (55102668800 B)
[2025-10-10 13:44:09] 2025-10-10 17:43:36,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:44:09] 2025-10-10 17:43:36,497 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:44:09] 2025-10-10 17:43:36,497 | INFO     | update_server=False
[2025-10-10 13:44:09] 2025-10-10 17:43:36,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:44:09] 2025-10-10 17:43:36,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:44:09] 2025-10-10 17:43:36,497 | INFO     | aborting loop
[2025-10-10 13:44:09] 2025-10-10 17:43:36,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:44:09] 2025-10-10 17:43:37,502 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:37,503 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:37,503 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:37,587 | INFO     | all data control threads have been joined
[2025-10-10 13:44:09] 2025-10-10 17:43:37,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:44:09] 2025-10-10 17:43:37,963 | INFO     | all payload control threads have been joined
[2025-10-10 13:44:09] 2025-10-10 17:43:38,079 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,112 | INFO     | all job control threads have been joined
[2025-10-10 13:44:09] 2025-10-10 17:43:38,564 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,594 | INFO     | [data] control thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,721 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,761 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,786 | INFO     | [job] validate thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,821 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,971 | INFO     | [payload] control thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:38,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:39,031 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:39,118 | INFO     | [job] control thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:39,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:44:09] 2025-10-10 17:43:39,945 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:43,892 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:44:09] 2025-10-10 17:43:59,448 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:44:09] 2025-10-10 17:43:59,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699259598656)>', '<ExcThread(monitor, started 140698632320768)>']
[2025-10-10 13:44:09] 2025-10-10 17:44:05,017 | INFO     | all workflow threads have been joined
[2025-10-10 13:44:09] 2025-10-10 17:44:05,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:44:09] 2025-10-10 17:44:05,017 | INFO     | traces error code: 0
[2025-10-10 13:44:09] 2025-10-10 17:44:05,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:44:09] 2025-10-10 17:44:07,946 | INFO     | PID=464770 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 13:44:09] 2025-10-10 17:44:07,947 | INFO     | .. there are 22 such processes running
[2025-10-10 13:44:09] 2025-10-10 17:44:07,948 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:44:09] 2025-10-10 17:44:07,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:44:09] 2025-10-10 17:44:07,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:44:09] 2025-10-10 17:44:07,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:44:09] 2025-10-10 17:44:07,949 | INFO     | [monitor] control thread has ended
[2025-10-10 13:44:09] 2025-10-10 17:44:08,272 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:44:09] 2025-10-10 17:44:08,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:44:09] 2025-10-10 17:44:08,507 [wrapper] pilotpid: 464770
[2025-10-10 13:44:09] 2025-10-10 17:44:08,522 [wrapper] Pilot exit status: 0
[2025-10-10 13:44:09] 2025-10-10 17:44:08,617 [wrapper] pandaids: 6837399390
[2025-10-10 13:44:09] 2025-10-10 17:44:08,832 [wrapper] cleanup supervisor_pilot 1193536 464771
[2025-10-10 13:44:09] 2025-10-10 17:44:08,845 [wrapper] Test setup, not cleaning
[2025-10-10 13:44:09] 2025-10-10 17:44:08,865 [wrapper] apfmon messages muted
[2025-10-10 13:44:09] 2025-10-10 17:44:08,888 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:44:09] 2025-10-10 17:44:08,909 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:44:09]  *** Error codes and diagnostics ***
[2025-10-10 13:44:09]     "exeErrorCode": 0,
[2025-10-10 13:44:09]     "exeErrorDiag": "",
[2025-10-10 13:44:09]     "pilotErrorCode": 0,
[2025-10-10 13:44:09]     "pilotErrorDiag": "",
[2025-10-10 13:44:09]  *** Listing of results directory ***
[2025-10-10 13:44:09] total 417768
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 23:12 pilot3.tar.gz
[2025-10-10 13:44:09] -rwx------. 1 boincer umatlas     36292 Oct  9 23:25 runpilot2-wrapper.sh
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 23:25 queuedata.json
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas       100 Oct 10 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:44:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 10:04 run_atlas
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas       105 Oct 10 10:04 job.xml
[2025-10-10 13:44:09] -rw-r--r--. 2 boincer umatlas 222593126 Oct 10 10:04 EVNT.46676267._001278.pool.root.1
[2025-10-10 13:44:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:04 start_atlas.sh
[2025-10-10 13:44:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 10:04 shared
[2025-10-10 13:44:09] -rw-r--r--. 2 boincer umatlas    569676 Oct 10 10:04 input.tar.gz
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas         0 Oct 10 10:04 boinc_lockfile
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 10:04 pandaJob.out
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas    975525 Oct 10 10:04 agis_schedconf.cvmfs.json
[2025-10-10 13:44:09] drwx------. 5 boincer umatlas      4096 Oct 10 10:04 pilot3
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas      6842 Oct 10 13:37 init_data.xml
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas 197041826 Oct 10 13:41 HITS.46676269._031356.pool.root.1
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas       530 Oct 10 13:41 boinc_task_state.xml
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas      1043 Oct 10 13:42 memory_monitor_summary.json
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas   1560580 Oct 10 13:42 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas    458180 Oct 10 13:42 log.46676269._031356.job.log.tgz.1
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas      7830 Oct 10 13:43 heartbeat.json
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 13:44 boinc_mmap_file
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas        28 Oct 10 13:44 wrapper_checkpoint.txt
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas        95 Oct 10 13:44 pilot_heartbeat.json
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas       822 Oct 10 13:44 pilotlog.txt
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas   1675163 Oct 10 13:44 log.46676269._031356.job.log.1
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas       357 Oct 10 13:44 output.list
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas       620 Oct 10 13:44 runtime_log
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas   2150400 Oct 10 13:44 result.tar.gz
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas      8709 Oct 10 13:44 runtime_log.err
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas       657 Oct 10 13:44 b1OODmdwIR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm09bNDmtxplXo.diag
[2025-10-10 13:44:09] -rw-r--r--. 1 boincer umatlas     21112 Oct 10 13:44 stderr.txt
[2025-10-10 13:44:09] HITS file was successfully produced:
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas 197041826 Oct 10 13:41 shared/HITS.pool.root.1
[2025-10-10 13:44:09]  *** Contents of shared directory: ***
[2025-10-10 13:44:09] total 412484
[2025-10-10 13:44:09] -rw-r--r--. 2 boincer umatlas 222593126 Oct 10 10:04 ATLAS.root_0
[2025-10-10 13:44:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:04 start_atlas.sh
[2025-10-10 13:44:09] -rw-r--r--. 2 boincer umatlas    569676 Oct 10 10:04 input.tar.gz
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas 197041826 Oct 10 13:41 HITS.pool.root.1
[2025-10-10 13:44:09] -rw-------. 1 boincer umatlas   2150400 Oct 10 13:44 result.tar.gz
13:44:11 (460565): run_atlas exited; CPU time 42987.437313
13:44:11 (460565): called boinc_finish(0)

</stderr_txt>
]]>

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