Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:43:31 (776715): wrapper (7.7.26015): starting
14:43:31 (776715): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 14:43:31] Arguments: --nthreads 12
[2025-10-10 14:43:31] Threads: 12
[2025-10-10 14:43:31] Checking for CVMFS
[2025-10-10 14:43:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:43:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:43:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:43:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:43:33] 2.13.2.0 129071 115074 215216 151558 2 64 34221810 39288833 8513 16776704 1 70162327 99.736 39085782 31551 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 14:43:33] CVMFS is ok
[2025-10-10 14:43:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 14:43:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 14:43:33] Further information can be found at the LHC@home message board.
[2025-10-10 14:43:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:43:33] Checking for apptainer binary...
[2025-10-10 14:43:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 14:43:33] Running /usr/bin/apptainer --version
[2025-10-10 14:43:34] apptainer version 1.4.3-1.el9
[2025-10-10 14:43:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:43:54] c-210-3.aglt2.org
[2025-10-10 14:43:54] apptainer works
[2025-10-10 14:43:54] Set ATHENA_PROC_NUMBER=12
[2025-10-10 14:43:54] Set ATHENA_CORE_NUMBER=12
[2025-10-10 14:43:54] Starting ATLAS job with PandaID=6837507013
[2025-10-10 14:43:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:15:54]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:15:54] 2025-10-10 22:14:58,688 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:15:54] 2025-10-10 22:14:58,689 | INFO     | sum of square deviations: 2594479844.256172
[2025-10-10 18:15:54] 2025-10-10 22:14:58,690 | INFO     | sum of deviations: -28587335912.04924
[2025-10-10 18:15:54] 2025-10-10 22:14:58,691 | INFO     | mean x: 1760128274.817734
[2025-10-10 18:15:54] 2025-10-10 22:14:58,691 | INFO     | mean y: 2631924.458128079
[2025-10-10 18:15:54] 2025-10-10 22:14:58,691 | INFO     | -- intersect: 19396645854.4203
[2025-10-10 18:15:54] 2025-10-10 22:14:58,691 | INFO     | intersect: 19396645854.4203
[2025-10-10 18:15:54] 2025-10-10 22:14:58,692 | INFO     | chi2: 5.539129117180594
[2025-10-10 18:15:54] 2025-10-10 22:14:58,692 | INFO     | sum of square deviations: 2407602819.81817
[2025-10-10 18:15:54] 2025-10-10 22:14:58,694 | INFO     | sum of deviations: 26139081571.090908
[2025-10-10 18:15:54] 2025-10-10 22:14:58,694 | INFO     | mean x: 1760128122.3636363
[2025-10-10 18:15:54] 2025-10-10 22:14:58,694 | INFO     | mean y: 2676353.5404040404
[2025-10-10 18:15:54] 2025-10-10 22:14:58,694 | INFO     | -- intersect: -19106842952.26804
[2025-10-10 18:15:54] 2025-10-10 22:14:58,694 | INFO     | intersect: -19106842952.26804
[2025-10-10 18:15:54] 2025-10-10 22:14:58,695 | INFO     | chi2: 2.6697466672410672
[2025-10-10 18:15:54] 2025-10-10 22:14:58,695 | INFO     | current chi2=2.6697466672410672 (change=51.80205027248105 %)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,695 | INFO     | sum of square deviations: 2229790834.6424856
[2025-10-10 18:15:54] 2025-10-10 22:14:58,701 | INFO     | sum of deviations: 25336875520.720203
[2025-10-10 18:15:54] 2025-10-10 22:14:58,701 | INFO     | mean x: 1760127969.849741
[2025-10-10 18:15:54] 2025-10-10 22:14:58,701 | INFO     | mean y: 2675665.404145078
[2025-10-10 18:15:54] 2025-10-10 22:14:58,701 | INFO     | -- intersect: -19997470796.661297
[2025-10-10 18:15:54] 2025-10-10 22:14:58,701 | INFO     | intersect: -19997470796.661297
[2025-10-10 18:15:54] 2025-10-10 22:14:58,702 | INFO     | chi2: 2.6724081575965304
[2025-10-10 18:15:54] 2025-10-10 22:14:58,702 | INFO     | current chi2=2.6724081575965304 (change=-0.09969074549734519 %)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,702 | INFO     | right removable region: 192
[2025-10-10 18:15:54] 2025-10-10 22:14:58,702 | INFO     | sum of square deviations: 2407377729.81817
[2025-10-10 18:15:54] 2025-10-10 22:14:58,704 | INFO     | sum of deviations: -77776262272.63637
[2025-10-10 18:15:54] 2025-10-10 22:14:58,704 | INFO     | mean x: 1760128427.3636363
[2025-10-10 18:15:54] 2025-10-10 22:14:58,704 | INFO     | mean y: 2671769.4393939395
[2025-10-10 18:15:54] 2025-10-10 22:14:58,704 | INFO     | -- intersect: 56867952404.272285
[2025-10-10 18:15:54] 2025-10-10 22:14:58,709 | INFO     | intersect: 56867952404.272285
[2025-10-10 18:15:54] 2025-10-10 22:14:58,709 | INFO     | chi2: 3.24338438562238
[2025-10-10 18:15:54] 2025-10-10 22:14:58,709 | INFO     | current chi2=3.24338438562238 (change=41.445950852410235 %)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,710 | INFO     | sum of square deviations: 2229544509.4922194
[2025-10-10 18:15:54] 2025-10-10 22:14:58,711 | INFO     | sum of deviations: -76840192076.09326
[2025-10-10 18:15:54] 2025-10-10 22:14:58,711 | INFO     | mean x: 1760128579.8860104
[2025-10-10 18:15:54] 2025-10-10 22:14:58,711 | INFO     | mean y: 2670878.6321243523
[2025-10-10 18:15:54] 2025-10-10 22:14:58,712 | INFO     | -- intersect: 60664665999.718666
[2025-10-10 18:15:54] 2025-10-10 22:14:58,712 | INFO     | intersect: 60664665999.718666
[2025-10-10 18:15:54] 2025-10-10 22:14:58,712 | INFO     | chi2: 3.2058070757076877
[2025-10-10 18:15:54] 2025-10-10 22:14:58,712 | INFO     | current chi2=3.2058070757076877 (change=1.1585833020985434 %)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,712 | INFO     | left removable region: 20
[2025-10-10 18:15:54] 2025-10-10 22:14:58,713 | INFO     | sum of square deviations: 1578192024.627904
[2025-10-10 18:15:54] 2025-10-10 22:14:58,718 | INFO     | sum of deviations: -5240835554.604655
[2025-10-10 18:15:54] 2025-10-10 22:14:58,718 | INFO     | mean x: 1760128549.4534883
[2025-10-10 18:15:54] 2025-10-10 22:14:58,718 | INFO     | mean y: 2700493.1744186045
[2025-10-10 18:15:54] 2025-10-10 22:14:58,718 | INFO     | -- intersect: 5847708032.6248
[2025-10-10 18:15:54] 2025-10-10 22:14:58,719 | INFO     | intersect: 5847708032.6248
[2025-10-10 18:15:54] 2025-10-10 22:14:58,719 | INFO     | chi2: 0.09707439721656079
[2025-10-10 18:15:54] 2025-10-10 22:14:58,719 | INFO     | -- intersect: 5847708032.6248
[2025-10-10 18:15:54] 2025-10-10 22:14:58,719 | INFO     | current memory leak: -3.32 B/s (using 172 data points, chi2=0.10)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,720 | INFO     | could have reported an average CPU frequency of 2600 MHz (10 samples)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,721 | INFO     | ..............................
[2025-10-10 18:15:54] 2025-10-10 22:14:58,721 | INFO     | . Timing measurements:
[2025-10-10 18:15:54] 2025-10-10 22:14:58,721 | INFO     | . get job = 0 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,721 | INFO     | . initial setup = 7 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,721 | INFO     | . payload setup = 53 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,721 | INFO     | . stage-in = 0 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,725 | INFO     | . payload execution = 12393 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,726 | INFO     | . stage-out = 5 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,726 | INFO     | . log creation = 0 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,726 | INFO     | ..............................
[2025-10-10 18:15:54] 2025-10-10 22:14:58,947 | INFO     | 
[2025-10-10 18:15:54] 2025-10-10 22:14:58,947 | INFO     | job summary report
[2025-10-10 18:15:54] 2025-10-10 22:14:58,947 | INFO     | --------------------------------------------------
[2025-10-10 18:15:54] 2025-10-10 22:14:58,947 | INFO     | PanDA job id: 6837507013
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | task id: 46676269
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | errors: (none)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | pilot state: finished 
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | transexitcode: 0
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | exeerrorcode: 0
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | exeerrordiag: 
[2025-10-10 18:15:54] 2025-10-10 22:14:58,952 | INFO     | exitcode: 0
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | exitmsg: OK
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | cpuconsumptiontime: 52091 s
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | nevents: 400
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | neventsw: 0
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | pid: 790248
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | pgrp: 790248
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | corecount: 12
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | event service: False
[2025-10-10 18:15:54] 2025-10-10 22:14:58,953 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 3: 2348913, 14: 2348941, 26: 2348969, 37: 2349415, 48: 2349415, 12450: 2379288, 12451: 2379287, 12457: 2388341, 12458: 
[2025-10-10 18:15:54] 2025-10-10 22:14:58,954 | INFO     | --------------------------------------------------
[2025-10-10 18:15:54] 2025-10-10 22:14:58,954 | INFO     | 
[2025-10-10 18:15:54] 2025-10-10 22:14:58,954 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 18:15:54] 2025-10-10 22:14:58,987 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,987 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,987 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:15:54] 2025-10-10 22:14:58,989 | INFO     | job 6837507013 has completed (purged errors)
[2025-10-10 18:15:54] 2025-10-10 22:14:58,990 | INFO     | overall cleanup function is called
[2025-10-10 18:15:54] 2025-10-10 22:14:59,999 | INFO     | --- collectZombieJob: --- 10, [790248]
[2025-10-10 18:15:54] 2025-10-10 22:15:00,000 | INFO     | zombie collector waiting for pid 790248
[2025-10-10 18:15:54] 2025-10-10 22:15:00,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:15:54] 2025-10-10 22:15:00,000 | INFO     | collected zombie processes
[2025-10-10 18:15:54] 2025-10-10 22:15:00,000 | INFO     | will attempt to kill all subprocesses of pid=790248
[2025-10-10 18:15:54] 2025-10-10 22:15:00,536 | INFO     | process IDs to be killed: [790248] (in reverse order)
[2025-10-10 18:15:54] 2025-10-10 22:15:00,656 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:15:54] 2025-10-10 22:15:00,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:15:54] 2025-10-10 22:15:00,669 | INFO     | did not find any defunct processes belonging to 790248
[2025-10-10 18:15:54] 2025-10-10 22:15:00,685 | INFO     | did not find any defunct processes belonging to 790248
[2025-10-10 18:15:54] 2025-10-10 22:15:00,686 | INFO     | ready for new job
[2025-10-10 18:15:54] 2025-10-10 22:15:00,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:15:54] 2025-10-10 22:15:00,688 | INFO     | ***************************************
[2025-10-10 18:15:54] 2025-10-10 22:15:00,688 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:15:54] 2025-10-10 22:15:00,688 | INFO     | ***************************************
[2025-10-10 18:15:54] 2025-10-10 22:15:00,689 | INFO     | 
[2025-10-10 18:15:54] 2025-10-10 22:15:00,690 | INFO     | architecture information:
[2025-10-10 18:15:54] 2025-10-10 22:15:00,691 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:15:54] 2025-10-10 22:15:00,762 | INFO     | cat /etc/os-release:
[2025-10-10 18:15:54] NAME="CentOS Linux"
[2025-10-10 18:15:54] VERSION="7 (Core)"
[2025-10-10 18:15:54] ID="centos"
[2025-10-10 18:15:54] ID_LIKE="rhel fedora"
[2025-10-10 18:15:54] VERSION_ID="7"
[2025-10-10 18:15:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:15:54] ANSI_COLOR="0;31"
[2025-10-10 18:15:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:15:54] HOME_URL="https://www.centos.org/"
[2025-10-10 18:15:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:15:54] 
[2025-10-10 18:15:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:15:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:15:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:15:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:15:54] 
[2025-10-10 18:15:54] 2025-10-10 22:15:00,762 | INFO     | ***************************************
[2025-10-10 18:15:54] 2025-10-10 22:15:01,266 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 18:15:54] 2025-10-10 22:15:01,318 | INFO     | sufficient remaining disk space (53121908736 B)
[2025-10-10 18:15:54] 2025-10-10 22:15:01,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:15:54] 2025-10-10 22:15:01,326 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:15:54] 2025-10-10 22:15:01,326 | INFO     | update_server=False
[2025-10-10 18:15:54] 2025-10-10 22:15:01,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:15:54] 2025-10-10 22:15:01,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:15:54] 2025-10-10 22:15:01,454 | INFO     | all job control threads have been joined
[2025-10-10 18:15:54] 2025-10-10 22:15:01,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 18:15:54] 2025-10-10 22:15:01,708 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 18:15:54] 2025-10-10 22:15:01,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:15:54] 2025-10-10 22:15:01,708 | INFO     | will abort loop
[2025-10-10 18:15:54] 2025-10-10 22:15:01,995 | INFO     | all data control threads have been joined
[2025-10-10 18:15:54] 2025-10-10 22:15:02,111 | INFO     | all payload control threads have been joined
[2025-10-10 18:15:54] 2025-10-10 22:15:02,343 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,473 | INFO     | [job] control thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,607 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,623 | INFO     | [job] validate thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,656 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,666 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,714 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:02,760 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:03,033 | INFO     | [data] control thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:03,118 | INFO     | [payload] control thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:03,195 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:03,352 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:03,708 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:03,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:15:54] 2025-10-10 22:15:04,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:15:54] 2025-10-10 22:15:04,969 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:08,783 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:15:54] 2025-10-10 22:15:15,389 [wrapper] supervise_pilot (15 min periods counter: 15)
[2025-10-10 18:15:54] 2025-10-10 22:15:32,455 | INFO     | PID=780727 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 18:15:54] 2025-10-10 22:15:32,456 | INFO     | .. there are 7 such processes running
[2025-10-10 18:15:54] 2025-10-10 22:15:32,457 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:15:54] 2025-10-10 22:15:32,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:15:54] 2025-10-10 22:15:32,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:15:54] 2025-10-10 22:15:47,639 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:15:54] 2025-10-10 22:15:48,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419886356288)>', '<ExcThread(monitor, started 140419612514048)>']
[2025-10-10 18:15:54] 2025-10-10 22:15:48,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:15:54] 2025-10-10 22:15:48,690 | INFO     | [monitor] control thread has ended
[2025-10-10 18:15:54] 2025-10-10 22:15:53,466 | INFO     | all workflow threads have been joined
[2025-10-10 18:15:54] 2025-10-10 22:15:53,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:15:54] 2025-10-10 22:15:53,467 | INFO     | traces error code: 0
[2025-10-10 18:15:54] 2025-10-10 22:15:53,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:15:54] 2025-10-10 22:15:53,952 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:15:54] 2025-10-10 22:15:53,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:15:54] 2025-10-10 22:15:54,005 [wrapper] pilotpid: 780727
[2025-10-10 18:15:54] 2025-10-10 22:15:54,008 [wrapper] Pilot exit status: 0
[2025-10-10 18:15:54] 2025-10-10 22:15:54,071 [wrapper] pandaids: 6837507013
[2025-10-10 18:15:54] 2025-10-10 22:15:54,138 [wrapper] cleanup supervisor_pilot 1104470 780728
[2025-10-10 18:15:54] 2025-10-10 22:15:54,141 [wrapper] Test setup, not cleaning
[2025-10-10 18:15:54] 2025-10-10 22:15:54,144 [wrapper] apfmon messages muted
[2025-10-10 18:15:54] 2025-10-10 22:15:54,147 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:15:54] 2025-10-10 22:15:54,151 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:15:54]  *** Error codes and diagnostics ***
[2025-10-10 18:15:54]     "exeErrorCode": 0,
[2025-10-10 18:15:54]     "exeErrorDiag": "",
[2025-10-10 18:15:54]     "pilotErrorCode": 0,
[2025-10-10 18:15:54]     "pilotErrorDiag": "",
[2025-10-10 18:15:54]  *** Listing of results directory ***
[2025-10-10 18:15:54] total 413312
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 02:48 pilot3.tar.gz
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 02:55 queuedata.json
[2025-10-10 18:15:54] -rwx------. 1 boincer umatlas     36292 Oct 10 02:55 runpilot2-wrapper.sh
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas       100 Oct 10 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:15:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 14:43 run_atlas
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas       105 Oct 10 14:43 job.xml
[2025-10-10 18:15:54] -rw-r--r--. 2 boincer umatlas 219389683 Oct 10 14:43 EVNT.46676267._001389.pool.root.1
[2025-10-10 18:15:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 14:43 shared
[2025-10-10 18:15:54] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 14:43 input.tar.gz
[2025-10-10 18:15:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:43 start_atlas.sh
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas         0 Oct 10 14:43 boinc_lockfile
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 14:43 pandaJob.out
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas    975525 Oct 10 14:45 agis_schedconf.cvmfs.json
[2025-10-10 18:15:54] drwx------. 5 boincer umatlas      4096 Oct 10 14:45 pilot3
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas 195757246 Oct 10 18:10 HITS.46676269._034132.pool.root.1
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas       530 Oct 10 18:10 boinc_task_state.xml
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas      6660 Oct 10 18:12 init_data.xml
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas      1045 Oct 10 18:14 memory_monitor_summary.json
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas   1560580 Oct 10 18:14 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas    480637 Oct 10 18:14 log.46676269._034132.job.log.tgz.1
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas      7834 Oct 10 18:14 heartbeat.json
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas        95 Oct 10 18:15 pilot_heartbeat.json
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 18:15 boinc_mmap_file
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas        28 Oct 10 18:15 wrapper_checkpoint.txt
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas      5008 Oct 10 18:15 pilotlog.txt
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas   1612288 Oct 10 18:15 log.46676269._034132.job.log.1
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas       357 Oct 10 18:15 output.list
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas       620 Oct 10 18:15 runtime_log
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas   2109440 Oct 10 18:15 result.tar.gz
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas      8701 Oct 10 18:15 runtime_log.err
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas       655 Oct 10 18:15 kPCNDmoDMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvecNDmqc2Qkm.diag
[2025-10-10 18:15:54] -rw-r--r--. 1 boincer umatlas     21039 Oct 10 18:15 stderr.txt
[2025-10-10 18:15:54] HITS file was successfully produced:
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas 195757246 Oct 10 18:10 shared/HITS.pool.root.1
[2025-10-10 18:15:54]  *** Contents of shared directory: ***
[2025-10-10 18:15:54] total 408060
[2025-10-10 18:15:54] -rw-r--r--. 2 boincer umatlas 219389683 Oct 10 14:43 ATLAS.root_0
[2025-10-10 18:15:54] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 14:43 input.tar.gz
[2025-10-10 18:15:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:43 start_atlas.sh
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas 195757246 Oct 10 18:10 HITS.pool.root.1
[2025-10-10 18:15:54] -rw-------. 1 boincer umatlas   2109440 Oct 10 18:15 result.tar.gz
18:15:55 (776715): run_atlas exited; CPU time 52321.974560
18:15:55 (776715): called boinc_finish(0)

</stderr_txt>
]]>

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