Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:30:27 (2308629): wrapper (7.7.26015): starting
10:30:27 (2308629): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 10:30:27] Arguments: --nthreads 8
[2025-10-10 10:30:27] Threads: 8
[2025-10-10 10:30:27] Checking for CVMFS
[2025-10-10 10:30:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:30:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:30:29] 2.13.2.0 129353 114821 190476 151548 1 292 33215655 39288832 9330 16776704 0 66184715 99.773 41578594 37683 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 10:30:29] CVMFS is ok
[2025-10-10 10:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:30:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:30:29] Further information can be found at the LHC@home message board.
[2025-10-10 10:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:30:29] Checking for apptainer binary...
[2025-10-10 10:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:30:29] Running /usr/bin/apptainer --version
[2025-10-10 10:30:29] apptainer version 1.4.3-1.el9
[2025-10-10 10:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:30:30] c-210-13.aglt2.org
[2025-10-10 10:30:30] apptainer works
[2025-10-10 10:30:30] Set ATHENA_PROC_NUMBER=8
[2025-10-10 10:30:30] Set ATHENA_CORE_NUMBER=8
[2025-10-10 10:30:30] Starting ATLAS job with PandaID=6832971526
[2025-10-10 10:30:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 10:49:50]  *** The last 200 lines of the pilot log: ***
[2025-10-10 10:49:50] 2025-10-10 14:48:43,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | WARNING  | wrong length of table data, x=[1760107173.0, 1760107234.0, 1760107295.0, 1760107357.0], y=[1241435.0, 1937754.0, 2406502.0, 2845164.0] (must be same and length>=4)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | could have reported an average CPU frequency of 2594 MHz (4 samples)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | ..............................
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . Timing measurements:
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . get job = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . initial setup = 7 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . payload setup = 49 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . stage-in = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . payload execution = 703 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . stage-out = 2 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . log creation = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | ..............................
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-6832971526/pilotlog.txt
[2025-10-10 10:49:50] 2025-10-10 14:48:43,249 | INFO     | monitor loop #155: job 0:6832971526 is in state 'failed'
[2025-10-10 10:49:50] 2025-10-10 14:48:43,266 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,293 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 10:49:50] - Log from pilotlog.txt -
[2025-10-10 10:49:50] 2025-10-10 14:48:43,043 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 10:49:50] 2025-10-10 14:48:43,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 10:49:50] 2025-10-10 14:48:43,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 10:49:50] 2025-10-10 14:48:43,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | WARNING  | wrong length of table data, x=[1760107173.0, 1760107234.0, 1760107295.0, 1760107357.0], y=[1241435.0, 1937754.0, 2406502.0, 2845164.0] (must be same and length>=4)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | could have reported an average CPU frequency of 2594 MHz (4 samples)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | ..............................
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . Timing measurements:
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . get job = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . initial setup = 7 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . payload setup = 49 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . stage-in = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . payload execution = 703 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . stage-out = 2 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . log creation = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | ..............................
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-6832971526/pilotlog.txt
[2025-10-10 10:49:50] 2025-10-10 14:48:43,249 | INFO     | monitor loop #155: job 0:6832971526 is in state 'failed'
[2025-10-10 10:49:50] 2025-10-10 14:48:43,266 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,294 | WARNING  | 
[2025-10-10 10:49:50] [begin log extracts]
[2025-10-10 10:49:50] - Log from pilotlog.txt -
[2025-10-10 10:49:50] 2025-10-10 14:48:43,043 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 10:49:50] 2025-10-10 14:48:43,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 10:49:50] 2025-10-10 14:48:43,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 10:49:50] 2025-10-10 14:48:43,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | WARNING  | wrong length of table data, x=[1760107173.0, 1760107234.0, 1760107295.0, 1760107357.0], y=[1241435.0, 1937754.0, 2406502.0, 2845164.0] (must be same and length>=4)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | could have reported an average CPU frequency of 2594 MHz (4 samples)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | ..............................
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . Timing measurements:
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . get job = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . initial setup = 7 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,058 | INFO     | . payload setup = 49 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . stage-in = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . payload execution = 703 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . stage-out = 2 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | . log creation = 0 s
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | ..............................
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 10:49:50] 2025-10-10 14:48:43,059 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-6832971526/pilotlog.txt
[2025-10-10 10:49:50] 2025-10-10 14:48:43,249 | INFO     | monitor loop #155: job 0:6832971526 is in state 'failed'
[2025-10-10 10:49:50] 2025-10-10 14:48:43,266 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-10 10:49:50] [end log extracts]
[2025-10-10 10:49:50] 2025-10-10 14:48:43,294 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 10:49:50] 2025-10-10 14:48:43,295 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-10 10:49:50] 2025-10-10 14:48:44,271 | INFO     | 
[2025-10-10 10:49:50] 2025-10-10 14:48:44,272 | INFO     | job summary report
[2025-10-10 10:49:50] 2025-10-10 14:48:44,272 | INFO     | --------------------------------------------------
[2025-10-10 10:49:50] 2025-10-10 14:48:44,272 | INFO     | PanDA job id: 6832971526
[2025-10-10 10:49:50] 2025-10-10 14:48:44,272 | INFO     | task id: 46376905
[2025-10-10 10:49:50] 2025-10-10 14:48:44,272 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 14:45:25,774 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 10:49:50] 2025-10-10 14:48:44,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 10:49:50] 2025-10-10 14:48:44,272 | INFO     | pilot state: failed 
[2025-10-10 10:49:50] 2025-10-10 14:48:44,273 | INFO     | transexitcode: 65
[2025-10-10 10:49:50] 2025-10-10 14:48:44,273 | INFO     | exeerrorcode: 65
[2025-10-10 10:49:50] 2025-10-10 14:48:44,273 | INFO     | exeerrordiag: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout
[2025-10-10 10:49:50] 2025-10-10 14:48:44,273 | INFO     | exitcode: 65
[2025-10-10 10:49:50] 2025-10-10 14:48:44,273 | INFO     | exitmsg: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout."
[2025-10-10 10:49:50] 2025-10-10 14:48:44,273 | INFO     | cpuconsumptiontime: 201 s
[2025-10-10 10:49:50] 2025-10-10 14:48:44,273 | INFO     | nevents: 0
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | neventsw: 0
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | pid: 2320701
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | pgrp: 2320701
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | corecount: 8
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | event service: False
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | sizes: {0: 2348595, 1: 2348794, 12: 2348794, 23: 2348822, 31: 2349112, 35: 2349140, 757: 2376819, 760: 2381114, 761: 2381170, 944: 2381364}
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | --------------------------------------------------
[2025-10-10 10:49:50] 2025-10-10 14:48:44,274 | INFO     | 
[2025-10-10 10:49:50] 2025-10-10 14:48:44,275 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 10:49:50] 2025-10-10 14:48:44,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 10:49:50] 2025-10-10 14:48:44,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 10:49:50] 2025-10-10 14:48:44,310 | INFO     | job 6832971526 has completed (purged errors)
[2025-10-10 10:49:50] 2025-10-10 14:48:44,313 | INFO     | overall cleanup function is called
[2025-10-10 10:49:50] 2025-10-10 14:48:45,335 | INFO     | --- collectZombieJob: --- 10, [2320701]
[2025-10-10 10:49:50] 2025-10-10 14:48:45,335 | INFO     | zombie collector waiting for pid 2320701
[2025-10-10 10:49:50] 2025-10-10 14:48:45,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 10:49:50] 2025-10-10 14:48:45,336 | INFO     | collected zombie processes
[2025-10-10 10:49:50] 2025-10-10 14:48:45,336 | INFO     | will attempt to kill all subprocesses of pid=2320701
[2025-10-10 10:49:50] 2025-10-10 14:48:46,278 | INFO     | process IDs to be killed: [2320701] (in reverse order)
[2025-10-10 10:49:50] 2025-10-10 14:48:46,390 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 10:49:50] 2025-10-10 14:48:46,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 10:49:50] 2025-10-10 14:48:46,474 | INFO     | did not find any defunct processes belonging to 2320701
[2025-10-10 10:49:50] 2025-10-10 14:48:46,536 | INFO     | did not find any defunct processes belonging to 2320701
[2025-10-10 10:49:50] 2025-10-10 14:48:46,537 | INFO     | ready for new job
[2025-10-10 10:49:50] 2025-10-10 14:48:46,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 10:49:50] 2025-10-10 14:48:46,574 | INFO     | ***************************************
[2025-10-10 10:49:50] 2025-10-10 14:48:46,574 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 10:49:50] 2025-10-10 14:48:46,574 | INFO     | ***************************************
[2025-10-10 10:49:50] 2025-10-10 14:48:46,574 | INFO     | 
[2025-10-10 10:49:50] 2025-10-10 14:48:46,577 | INFO     | architecture information:
[2025-10-10 10:49:50] 2025-10-10 14:48:46,594 | INFO     | executing command: cat /etc/os-release
[2025-10-10 10:49:50] 2025-10-10 14:48:46,788 | INFO     | cat /etc/os-release:
[2025-10-10 10:49:50] NAME="CentOS Linux"
[2025-10-10 10:49:50] VERSION="7 (Core)"
[2025-10-10 10:49:50] ID="centos"
[2025-10-10 10:49:50] ID_LIKE="rhel fedora"
[2025-10-10 10:49:50] VERSION_ID="7"
[2025-10-10 10:49:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 10:49:50] ANSI_COLOR="0;31"
[2025-10-10 10:49:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 10:49:50] HOME_URL="https://www.centos.org/"
[2025-10-10 10:49:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 10:49:50] 
[2025-10-10 10:49:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 10:49:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 10:49:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 10:49:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 10:49:50] 
[2025-10-10 10:49:50] 2025-10-10 14:48:46,789 | INFO     | ***************************************
[2025-10-10 10:49:50] 2025-10-10 14:48:47,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 10:49:50] 2025-10-10 14:48:47,592 | INFO     | sufficient remaining disk space (53539241984 B)
[2025-10-10 10:49:50] 2025-10-10 14:48:47,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 10:49:50] 2025-10-10 14:48:47,592 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 10:49:50] 2025-10-10 14:48:47,592 | INFO     | update_server=False
[2025-10-10 10:49:50] 2025-10-10 14:48:47,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 10:49:50] 2025-10-10 14:48:47,600 | INFO     | all data control threads have been joined
[2025-10-10 10:49:50] 2025-10-10 14:48:47,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:49:50] 2025-10-10 14:48:47,613 | INFO     | aborting loop
[2025-10-10 10:49:50] 2025-10-10 14:48:47,628 | INFO     | all job control threads have been joined
[2025-10-10 10:49:50] 2025-10-10 14:48:48,399 | INFO     | all payload control threads have been joined
[2025-10-10 10:49:50] 2025-10-10 14:48:48,598 | INFO     | [job] retrieve thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:48,606 | INFO     | [data] control thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:48,619 | INFO     | [job] job monitor thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:48,634 | INFO     | [job] control thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:48,668 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:48,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 10:49:50] 2025-10-10 14:48:48,703 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:49,043 | INFO     | [job] validate thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:49,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 10:49:50] 2025-10-10 14:48:49,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:49,184 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:49,284 | INFO     | [payload] validate_post thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:49,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:49:50] 2025-10-10 14:48:49,415 | INFO     | [payload] control thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:49,475 | INFO     | [payload] failed_post thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:50,009 | INFO     | [data] copytool_in thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:50,297 | INFO     | [job] queue monitor thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:51,051 | INFO     | [data] copytool_out thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:48:52,704 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 10:49:50] 2025-10-10 14:49:18,380 | INFO     | PID=2312419 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 10:49:50] 2025-10-10 14:49:18,380 | INFO     | .. there are 7 such processes running
[2025-10-10 10:49:50] 2025-10-10 14:49:18,382 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 10:49:50] 2025-10-10 14:49:18,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 10:49:50] 2025-10-10 14:49:18,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 10:49:50] 2025-10-10 14:49:39,992 | INFO     | [monitor] cgroup control has ended
[2025-10-10 10:49:50] 2025-10-10 14:49:41,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407174084416)>', '<ExcThread(monitor, started 140406205429504)>']
[2025-10-10 10:49:50] 2025-10-10 14:49:41,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 10:49:50] 2025-10-10 14:49:41,571 | INFO     | [monitor] control thread has ended
[2025-10-10 10:49:50] 2025-10-10 14:49:46,065 | INFO     | all workflow threads have been joined
[2025-10-10 10:49:50] 2025-10-10 14:49:46,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 10:49:50] 2025-10-10 14:49:46,066 | INFO     | traces error code: 0
[2025-10-10 10:49:50] 2025-10-10 14:49:46,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 10:49:50] 2025-10-10 14:49:48,114 [wrapper] ==== pilot stdout END ====
[2025-10-10 10:49:50] 2025-10-10 14:49:48,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 10:49:50] 2025-10-10 14:49:48,318 [wrapper] pilotpid: 2312419
[2025-10-10 10:49:50] 2025-10-10 14:49:48,369 [wrapper] Pilot exit status: 0
[2025-10-10 10:49:50] 2025-10-10 14:49:48,571 [wrapper] pandaids: 6832971526
[2025-10-10 10:49:50] 2025-10-10 14:49:48,649 [wrapper] cleanup supervisor_pilot 2341831 2312420
[2025-10-10 10:49:50] 2025-10-10 14:49:48,697 [wrapper] Test setup, not cleaning
[2025-10-10 10:49:50] 2025-10-10 14:49:48,741 [wrapper] apfmon messages muted
[2025-10-10 10:49:50] 2025-10-10 14:49:48,785 [wrapper] ==== wrapper stdout END ====
[2025-10-10 10:49:50] 2025-10-10 14:49:48,857 [wrapper] ==== wrapper stderr END ====
[2025-10-10 10:49:50]  *** Error codes and diagnostics ***
[2025-10-10 10:49:50]     "exeErrorCode": 65,
[2025-10-10 10:49:50]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2025-10-10 10:49:50]     "pilotErrorCode": 1305,
[2025-10-10 10:49:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2025-10-10 10:49:50]  *** Listing of results directory ***
[2025-10-10 10:49:50] total 216724
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 15:47 pilot3.tar.gz
[2025-10-10 10:49:50] -rwx------. 1 boincer umatlas     36292 Oct  6 15:49 runpilot2-wrapper.sh
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 15:49 queuedata.json
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas       100 Oct 10 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 10:49:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 10:30 run_atlas
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas       105 Oct 10 10:30 job.xml
[2025-10-10 10:49:50] -rw-r--r--. 2 boincer umatlas 217542614 Oct 10 10:30 EVNT.46376901._002747.pool.root.1
[2025-10-10 10:49:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:30 start_atlas.sh
[2025-10-10 10:49:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 10:30 shared
[2025-10-10 10:49:50] -rw-r--r--. 2 boincer umatlas    565608 Oct 10 10:30 input.tar.gz
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas         0 Oct 10 10:30 boinc_lockfile
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas      2519 Oct 10 10:30 pandaJob.out
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas    975525 Oct 10 10:31 agis_schedconf.cvmfs.json
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas   1560580 Oct 10 10:31 agis_ddmendpoints.agis.ALL.json
[2025-10-10 10:49:50] drwx------. 4 boincer umatlas      4096 Oct 10 10:31 pilot3
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas       526 Oct 10 10:45 boinc_task_state.xml
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas      1018 Oct 10 10:45 memory_monitor_summary.json
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas     63604 Oct 10 10:45 log.46376905._118031.job.log.tgz.1
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas      6656 Oct 10 10:45 init_data.xml
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas     10541 Oct 10 10:48 heartbeat.json
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas        95 Oct 10 10:49 pilot_heartbeat.json
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 10:49 boinc_mmap_file
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas      4823 Oct 10 10:49 pilotlog.txt
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas        25 Oct 10 10:49 wrapper_checkpoint.txt
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas    185073 Oct 10 10:49 log.46376905._118031.job.log.1
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas       188 Oct 10 10:49 output.list
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas       620 Oct 10 10:49 runtime_log
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas    266240 Oct 10 10:49 result.tar.gz
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas      8551 Oct 10 10:49 runtime_log.err
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas       646 Oct 10 10:49 1n7KDmJO6P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtuJMDmnX6FBo.diag
[2025-10-10 10:49:50] -rw-r--r--. 1 boincer umatlas     22560 Oct 10 10:49 stderr.txt
[2025-10-10 10:49:50] No HITS result produced
[2025-10-10 10:49:50]  *** Contents of shared directory: ***
[2025-10-10 10:49:50] total 213276
[2025-10-10 10:49:50] -rw-r--r--. 2 boincer umatlas 217542614 Oct 10 10:30 ATLAS.root_0
[2025-10-10 10:49:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 10:30 start_atlas.sh
[2025-10-10 10:49:50] -rw-r--r--. 2 boincer umatlas    565608 Oct 10 10:30 input.tar.gz
[2025-10-10 10:49:50] -rw-------. 1 boincer umatlas    266240 Oct 10 10:49 result.tar.gz
10:49:52 (2308629): run_atlas exited; CPU time 225.623310
10:49:52 (2308629): called boinc_finish(0)

</stderr_txt>
]]>

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