Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 14:51:47 (42962): vboxwrapper version 26210
2025-10-13 14:51:47 (42962): BOINC client version: 8.2.4
2025-10-13 14:51:47 (42962): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-13 14:51:47 (42962): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 14:51:47 (42962): Create VM. (boinc_5fcf857594e6f145, slot#0)
2025-10-13 14:51:47 (42962): Setting Memory Size for VM. (4800MB)
2025-10-13 14:51:48 (42962): Setting CPU Count for VM. (8)
2025-10-13 14:51:48 (42962): Setting Chipset Options for VM.
2025-10-13 14:51:48 (42962): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 14:51:48 (42962): Setting Boot Options for VM.
2025-10-13 14:51:48 (42962): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 14:51:48 (42962): Enabling VM Network Access.
2025-10-13 14:51:48 (42962): Disabling USB Support for VM.
2025-10-13 14:51:48 (42962): Disabling COM Port Support for VM.
2025-10-13 14:51:48 (42962): Disabling LPT Port Support for VM.
2025-10-13 14:51:48 (42962): Disabling Audio Support for VM.
2025-10-13 14:51:48 (42962): Disabling Clipboard Support for VM.
2025-10-13 14:51:48 (42962): Disabling Drag and Drop Support for VM.
2025-10-13 14:51:48 (42962): Adding storage controller(s) to VM.
2025-10-13 14:51:48 (42962): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 14:51:48 (42962): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 14:51:48 (42962): forwarding host port 39179 to guest port 80
2025-10-13 14:51:48 (42962): Enabling remote desktop for VM.
2025-10-13 14:51:49 (42962): Required extension pack not installed, remote desktop not enabled.
2025-10-13 14:51:49 (42962): Enabling shared directory for VM.
2025-10-13 14:51:49 (42962): Starting VM using VBoxManage interface. (boinc_5fcf857594e6f145, slot#0)
2025-10-13 14:51:50 (42962): Successfully started VM. (PID = '43523')
2025-10-13 14:51:50 (42962): Reporting VM Process ID to BOINC.
2025-10-13 14:51:50 (42962): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-13 14:51:50 (42962): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 14:51:50 (42962): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 14:51:50 (42962): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 14:51:50 (42962): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 14:51:50 (42962): Detected: Web Application Enabled (http://localhost:39179)
2025-10-13 14:51:51 (42962): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 14:52:10 (42962): Preference change detected
2025-10-13 14:52:10 (42962): Setting CPU throttle for VM. (80%)
2025-10-13 14:52:10 (42962): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 14:52:11 (42962): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 14:52:12 (42962): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 14:52:12 (42962): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 14:52:14 (42962): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 14:52:14 (42962): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 14:52:14 (42962): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 14:52:20 (42962): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 14:52:20 (42962): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 14:52:29 (42962): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.000252 main     Log opened 2025-10-13T12:52:07.988576000Z
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.000471 main     OS Product: Linux
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.000492 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.000505 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.000517 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.000517 main     Process ID: 1361
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.000518 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 14:52:29 (42962): Guest Log: 00:00:00.001077 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 14:52:29 (42962): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 14:52:29 (42962): Guest Log: [INFO] Mounting shared directory
2025-10-13 14:52:29 (42962): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 14:52:32 (42962): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 14:52:32 (42962): Guest Log: [INFO] Detected branch: prod
2025-10-13 14:52:32 (42962): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 14:52:32 (42962): Guest Log: Copying input files
2025-10-13 14:52:33 (42962): Guest Log: Copied input files into RunAtlas.
2025-10-13 14:52:33 (42962): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 14:52:33 (42962): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 14:52:33 (42962): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 14:52:33 (42962): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 14:52:42 (42962): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 14:52:43 (42962): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 14:52:43 (42962): Guest Log: 2.6.3.0 1636 0 32172 151661 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 14:52:44 (42962): Guest Log: copied the webapp to /var/www
2025-10-13 14:52:44 (42962): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-13 14:52:44 (42962): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-13 14:52:44 (42962): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 14:52:44 (42962): Guest Log:  *** Starting ATLAS job. (PandaID=6837508300 taskID=46676269) ***
2025-10-13 16:31:13 (42962): Status Report: Elapsed Time: '6000.000000'
2025-10-13 16:31:13 (42962): Status Report: CPU Time: '25789.960000'
2025-10-13 17:11:43 (42962): Guest Log:  *** Job finished ***
2025-10-13 17:11:43 (42962): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:18,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:18,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:18,840 | INFO     | [monitor] cgroup control has ended
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:18,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638271522624)>', '<ExcThread(monitor, started 140637672294144)>']
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:19,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:19,576 | INFO     | [monitor] control thread has ended
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:23,976 | INFO     | all workflow threads have been joined
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:23,977 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:23,977 | INFO     | traces error code: 0
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:23,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,037 [wrapper] ==== pilot stdout END ====
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,041 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,046 [wrapper] pilotpid: 6057
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,050 [wrapper] Pilot exit status: 0
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,128 [wrapper] pandaids: 6837508300
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,161 [wrapper] cleanup supervisor_pilot  5495 6058
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,167 [wrapper] Test setup, not cleaning
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,174 [wrapper] apfmon messages muted
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,179 [wrapper] ==== wrapper stdout END ====
2025-10-13 17:11:43 (42962): Guest Log: 2025-10-13 15:11:24,184 [wrapper] ==== wrapper stderr END ====
2025-10-13 17:11:43 (42962): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 17:11:43 (42962): Guest Log:     "exeErrorCode": 0,
2025-10-13 17:11:43 (42962): Guest Log:     "exeErrorDiag": "",
2025-10-13 17:11:43 (42962): Guest Log:     "pilotErrorCode": 0,
2025-10-13 17:11:43 (42962): Guest Log:     "pilotErrorDiag": "",
2025-10-13 17:11:43 (42962): Guest Log:  *** Listing of results directory ***
2025-10-13 17:11:43 (42962): Guest Log: total 191632
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 06:55 queuedata.json
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 06:56 pilot3.tar.gz
2025-10-13 17:11:43 (42962): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 06:56 runpilot2-wrapper.sh
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas    569675 Oct 13 12:52 input.tar.gz
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 13 12:52 start_atlas.sh
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas      6575 Oct 13 12:52 init_data.xml
2025-10-13 17:11:43 (42962): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 12:52 EVNT.46676267._001390.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 12:52 pandaJob.out
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas    972497 Oct 13 12:53 agis_schedconf.cvmfs.json
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 12:53 agis_ddmendpoints.agis.ALL.json
2025-10-13 17:11:43 (42962): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 12:53 pilot3
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas 189507880 Oct 13 15:10 HITS.46676269._034171.pool.root.1
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas      1039 Oct 13 15:10 memory_monitor_summary.json
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas    375352 Oct 13 15:10 log.46676269._034171.job.log.tgz.1
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas      7843 Oct 13 15:10 heartbeat.json
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 15:11 pilot_heartbeat.json
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 13 15:11 pilotlog.txt
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas   1074565 Oct 13 15:11 log.46676269._034171.job.log.1
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 15:11 output.list
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 15:11 runtime_log
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas   1464320 Oct 13 15:11 result.tar.gz
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas       667 Oct 13 15:11 ywGLDmLEMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhfcNDmHcHY0n.diag
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 atlas atlas      8672 Oct 13 15:11 runtime_log.err
2025-10-13 17:11:43 (42962): Guest Log: Looking for outputfile HITS.46676269._034171.pool.root.1
2025-10-13 17:11:43 (42962): Guest Log: HITS file was successfully produced
2025-10-13 17:11:43 (42962): Guest Log: -rw-------. 1 atlas atlas 189507880 Oct 13 15:10 /home/atlas/RunAtlas/HITS.46676269._034171.pool.root.1
2025-10-13 17:11:43 (42962): Guest Log: Successfully finished the ATLAS job!
2025-10-13 17:11:43 (42962): Guest Log: Copying the results back to the shared directory!
2025-10-13 17:11:43 (42962): Guest Log:  *** Contents of shared directory: ***
2025-10-13 17:11:43 (42962): Guest Log: total 220000
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 root root 223213236 Oct 13 12:51 ATLAS.root_0
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 root root      6575 Oct 13 12:51 init_data.xml
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 root root    569675 Oct 13 12:51 input.tar.gz
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 root root   1464320 Oct 13  2025 result.tar.gz
2025-10-13 17:11:43 (42962): Guest Log: -rw-r--r--. 1 root root     15120 Oct 13 12:51 start_atlas.sh
2025-10-13 17:11:43 (42962): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 17:11:43 (42962): VM Completion File Detected.
2025-10-13 17:11:43 (42962): Powering off VM.
2025-10-13 17:11:44 (42962): Successfully stopped VM.
2025-10-13 17:11:44 (42962): Deregistering VM. (boinc_5fcf857594e6f145, slot#0)
2025-10-13 17:11:44 (42962): Removing network bandwidth throttle group from VM.
2025-10-13 17:11:44 (42962): Removing VM from VirtualBox.
2025-10-13 17:11:49 (42962): called boinc_finish(0)

</stderr_txt>
]]>

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