Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:15:17 (3113294): wrapper (7.7.26015): starting
08:15:17 (3113294): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 08:15:17] Arguments: --nthreads 10
[2025-10-10 08:15:17] Threads: 10
[2025-10-10 08:15:17] Checking for CVMFS
[2025-10-10 08:15:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 08:15:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 08:15:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 08:15:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 08:15:18] 2.13.2.0 3657063 126350 458172 151545 1 290 32584870 32935937 20603 16776704 0 176927086 99.570 210843645 30732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 08:15:18] CVMFS is ok
[2025-10-10 08:15:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 08:15:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 08:15:18] Further information can be found at the LHC@home message board.
[2025-10-10 08:15:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 08:15:18] Checking for apptainer binary...
[2025-10-10 08:15:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 08:15:18] Running /usr/bin/apptainer --version
[2025-10-10 08:15:18] apptainer version 1.4.3-1.el9
[2025-10-10 08:15:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 08:15:18] c6-6-39-4.aglt2.org
[2025-10-10 08:15:18] apptainer works
[2025-10-10 08:15:18] Set ATHENA_PROC_NUMBER=10
[2025-10-10 08:15:18] Set ATHENA_CORE_NUMBER=10
[2025-10-10 08:15:18] Starting ATLAS job with PandaID=6830643192
[2025-10-10 08:15:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:33:18]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:33:18] 2025-10-10 15:32:15,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:33:18] 2025-10-10 15:32:15,854 | INFO     | fitting pss+swap vs Time
[2025-10-10 11:33:18] 2025-10-10 15:32:15,855 | INFO     | sum of square deviations: 2229135361.523315
[2025-10-10 11:33:18] 2025-10-10 15:32:15,856 | INFO     | sum of deviations: 15711666117.005188
[2025-10-10 11:33:18] 2025-10-10 15:32:15,856 | INFO     | mean x: 1760104413.2642486
[2025-10-10 11:33:18] 2025-10-10 15:32:15,856 | INFO     | mean y: 2202048.725388601
[2025-10-10 11:33:18] 2025-10-10 15:32:15,856 | INFO     | -- intersect: -12403582431.485483
[2025-10-10 11:33:18] 2025-10-10 15:32:15,856 | INFO     | intersect: -12403582431.485483
[2025-10-10 11:33:18] 2025-10-10 15:32:15,857 | INFO     | chi2: 2.30257156521022
[2025-10-10 11:33:18] 2025-10-10 15:32:15,857 | INFO     | sum of square deviations: 2060336221.7021267
[2025-10-10 11:33:18] 2025-10-10 15:32:15,858 | INFO     | sum of deviations: 27567558058.87233
[2025-10-10 11:33:18] 2025-10-10 15:32:15,858 | INFO     | mean x: 1760104260.7659574
[2025-10-10 11:33:18] 2025-10-10 15:32:15,858 | INFO     | mean y: 2212564.5425531915
[2025-10-10 11:33:18] 2025-10-10 15:32:15,858 | INFO     | -- intersect: -23548204055.444016
[2025-10-10 11:33:18] 2025-10-10 15:32:15,858 | INFO     | intersect: -23548204055.444016
[2025-10-10 11:33:18] 2025-10-10 15:32:15,859 | INFO     | chi2: 1.6296524273242177
[2025-10-10 11:33:18] 2025-10-10 15:32:15,859 | INFO     | current chi2=1.6296524273242177 (change=29.224678531308367 %)
[2025-10-10 11:33:18] 2025-10-10 15:32:15,863 | INFO     | sum of square deviations: 1900269963.4098399
[2025-10-10 11:33:18] 2025-10-10 15:32:15,864 | INFO     | sum of deviations: 29889097316.983593
[2025-10-10 11:33:18] 2025-10-10 15:32:15,864 | INFO     | mean x: 1760104108.262295
[2025-10-10 11:33:18] 2025-10-10 15:32:15,865 | INFO     | mean y: 2214759.229508197
[2025-10-10 11:33:18] 2025-10-10 15:32:15,865 | INFO     | -- intersect: -27682232184.022087
[2025-10-10 11:33:18] 2025-10-10 15:32:15,865 | INFO     | intersect: -27682232184.022087
[2025-10-10 11:33:18] 2025-10-10 15:32:15,865 | INFO     | chi2: 1.608677217450938
[2025-10-10 11:33:18] 2025-10-10 15:32:15,865 | INFO     | current chi2=1.608677217450938 (change=1.2870971454765683 %)
[2025-10-10 11:33:18] 2025-10-10 15:32:15,865 | INFO     | right removable region: 182
[2025-10-10 11:33:18] 2025-10-10 15:32:15,865 | INFO     | sum of square deviations: 2060316641.1648953
[2025-10-10 11:33:18] 2025-10-10 15:32:15,867 | INFO     | sum of deviations: -13617452550.6383
[2025-10-10 11:33:18] 2025-10-10 15:32:15,867 | INFO     | mean x: 1760104565.7712767
[2025-10-10 11:33:18] 2025-10-10 15:32:15,867 | INFO     | mean y: 2228320.659574468
[2025-10-10 11:33:18] 2025-10-10 15:32:15,867 | INFO     | -- intersect: 11635459800.555157
[2025-10-10 11:33:18] 2025-10-10 15:32:15,867 | INFO     | intersect: 11635459800.555157
[2025-10-10 11:33:18] 2025-10-10 15:32:15,871 | INFO     | chi2: 0.7943611717807091
[2025-10-10 11:33:18] 2025-10-10 15:32:15,872 | INFO     | current chi2=0.7943611717807091 (change=65.50112996343783 %)
[2025-10-10 11:33:18] 2025-10-10 15:32:15,872 | INFO     | sum of square deviations: 1900253616.3387942
[2025-10-10 11:33:18] 2025-10-10 15:32:15,873 | INFO     | sum of deviations: -15649415350.568304
[2025-10-10 11:33:18] 2025-10-10 15:32:15,873 | INFO     | mean x: 1760104718.273224
[2025-10-10 11:33:18] 2025-10-10 15:32:15,873 | INFO     | mean y: 2230242.2513661203
[2025-10-10 11:33:18] 2025-10-10 15:32:15,873 | INFO     | -- intersect: 14497458437.013443
[2025-10-10 11:33:18] 2025-10-10 15:32:15,873 | INFO     | intersect: 14497458437.013443
[2025-10-10 11:33:18] 2025-10-10 15:32:15,874 | INFO     | chi2: 0.7835531719580483
[2025-10-10 11:33:18] 2025-10-10 15:32:15,874 | INFO     | current chi2=0.7835531719580483 (change=1.3605901454665303 %)
[2025-10-10 11:33:18] 2025-10-10 15:32:15,874 | INFO     | left removable region: 20
[2025-10-10 11:33:18] 2025-10-10 15:32:15,874 | INFO     | sum of square deviations: 1318250202.5493882
[2025-10-10 11:33:18] 2025-10-10 15:32:15,879 | INFO     | sum of deviations: -1562584186.1481485
[2025-10-10 11:33:18] 2025-10-10 15:32:15,879 | INFO     | mean x: 1760104687.771605
[2025-10-10 11:33:18] 2025-10-10 15:32:15,879 | INFO     | mean y: 2247155.185185185
[2025-10-10 11:33:18] 2025-10-10 15:32:15,880 | INFO     | -- intersect: 2088582318.0838945
[2025-10-10 11:33:18] 2025-10-10 15:32:15,880 | INFO     | intersect: 2088582318.0838945
[2025-10-10 11:33:18] 2025-10-10 15:32:15,880 | INFO     | chi2: 0.07435945180780401
[2025-10-10 11:33:18] 2025-10-10 15:32:15,880 | INFO     | -- intersect: 2088582318.0838945
[2025-10-10 11:33:18] 2025-10-10 15:32:15,880 | INFO     | current memory leak: -1.19 B/s (using 162 data points, chi2=0.07)
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | could have reported an average CPU frequency of 2946 MHz (10 samples)
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | ..............................
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . Timing measurements:
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . get job = 0 s
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . initial setup = 2 s
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . payload setup = 5 s
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . stage-in = 0 s
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . payload execution = 11736 s
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . stage-out = 4 s
[2025-10-10 11:33:18] 2025-10-10 15:32:15,881 | INFO     | . log creation = 0 s
[2025-10-10 11:33:18] 2025-10-10 15:32:15,882 | INFO     | ..............................
[2025-10-10 11:33:18] 2025-10-10 15:32:16,072 | INFO     | 
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | job summary report
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | --------------------------------------------------
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | PanDA job id: 6830643192
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | task id: 46376905
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | errors: (none)
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | pilot state: finished 
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | transexitcode: 0
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | exeerrorcode: 0
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | exeerrordiag: 
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | exitcode: 0
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | exitmsg: OK
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | cpuconsumptiontime: 37615 s
[2025-10-10 11:33:18] 2025-10-10 15:32:16,073 | INFO     | nevents: 400
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | neventsw: 0
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | pid: 3124061
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | pgrp: 3124061
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | corecount: 10
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | event service: False
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | sizes: {0: 2348816, 5: 2349078, 11: 2349134, 11743: 2378618, 11749: 2387672, 11789: 2387810}
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | --------------------------------------------------
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | 
[2025-10-10 11:33:18] 2025-10-10 15:32:16,074 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 11:33:18] 2025-10-10 15:32:16,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:33:18] 2025-10-10 15:32:16,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:33:18] 2025-10-10 15:32:16,146 | INFO     | job 6830643192 has completed (purged errors)
[2025-10-10 11:33:18] 2025-10-10 15:32:16,147 | INFO     | overall cleanup function is called
[2025-10-10 11:33:18] 2025-10-10 15:32:17,168 | INFO     | --- collectZombieJob: --- 10, [3124061]
[2025-10-10 11:33:18] 2025-10-10 15:32:17,168 | INFO     | zombie collector waiting for pid 3124061
[2025-10-10 11:33:18] 2025-10-10 15:32:17,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:33:18] 2025-10-10 15:32:17,169 | INFO     | collected zombie processes
[2025-10-10 11:33:18] 2025-10-10 15:32:17,169 | INFO     | will attempt to kill all subprocesses of pid=3124061
[2025-10-10 11:33:18] 2025-10-10 15:32:21,225 | INFO     | process IDs to be killed: [3124061] (in reverse order)
[2025-10-10 11:33:18] 2025-10-10 15:32:22,235 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:33:18] 2025-10-10 15:32:22,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:33:18] 2025-10-10 15:32:22,423 | INFO     | did not find any defunct processes belonging to 3124061
[2025-10-10 11:33:18] 2025-10-10 15:32:22,451 | INFO     | did not find any defunct processes belonging to 3124061
[2025-10-10 11:33:18] 2025-10-10 15:32:22,452 | INFO     | ready for new job
[2025-10-10 11:33:18] 2025-10-10 15:32:22,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:33:18] 2025-10-10 15:32:22,476 | INFO     | ***************************************
[2025-10-10 11:33:18] 2025-10-10 15:32:22,476 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 11:33:18] 2025-10-10 15:32:22,476 | INFO     | ***************************************
[2025-10-10 11:33:18] 2025-10-10 15:32:22,476 | INFO     | 
[2025-10-10 11:33:18] 2025-10-10 15:32:22,497 | INFO     | architecture information:
[2025-10-10 11:33:18] 2025-10-10 15:32:22,530 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:33:18] 2025-10-10 15:32:22,685 | INFO     | cat /etc/os-release:
[2025-10-10 11:33:18] NAME="CentOS Linux"
[2025-10-10 11:33:18] VERSION="7 (Core)"
[2025-10-10 11:33:18] ID="centos"
[2025-10-10 11:33:18] ID_LIKE="rhel fedora"
[2025-10-10 11:33:18] VERSION_ID="7"
[2025-10-10 11:33:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:33:18] ANSI_COLOR="0;31"
[2025-10-10 11:33:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:33:18] HOME_URL="https://www.centos.org/"
[2025-10-10 11:33:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:33:18] 
[2025-10-10 11:33:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:33:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:33:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:33:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:33:18] 
[2025-10-10 11:33:18] 2025-10-10 15:32:22,686 | INFO     | ***************************************
[2025-10-10 11:33:18] 2025-10-10 15:32:23,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 11:33:18] 2025-10-10 15:32:23,235 | INFO     | sufficient remaining disk space (74672242688 B)
[2025-10-10 11:33:18] 2025-10-10 15:32:23,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:33:18] 2025-10-10 15:32:23,236 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:33:18] 2025-10-10 15:32:23,236 | INFO     | update_server=False
[2025-10-10 11:33:18] 2025-10-10 15:32:23,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:33:18] 2025-10-10 15:32:23,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:33:18] 2025-10-10 15:32:23,505 | INFO     | all data control threads have been joined
[2025-10-10 11:33:18] 2025-10-10 15:32:23,540 | INFO     | all job control threads have been joined
[2025-10-10 11:33:18] 2025-10-10 15:32:23,652 | INFO     | all payload control threads have been joined
[2025-10-10 11:33:18] 2025-10-10 15:32:23,697 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 11:33:18] 2025-10-10 15:32:23,697 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 11:33:18] 2025-10-10 15:32:23,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:33:18] 2025-10-10 15:32:23,698 | INFO     | will abort loop
[2025-10-10 11:33:18] 2025-10-10 15:32:24,242 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:24,442 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:24,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:33:18] 2025-10-10 15:32:24,547 | INFO     | [job] control thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:24,603 | INFO     | [data] control thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:24,658 | INFO     | [payload] control thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:24,689 | INFO     | [job] validate thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:24,736 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:25,143 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:25,173 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:25,207 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:25,212 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:25,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:33:18] 2025-10-10 15:32:25,733 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:25,734 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:26,420 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:26,504 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:27,503 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:33:18] 2025-10-10 15:32:51,596 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:33:18] 2025-10-10 15:32:52,097 | INFO     | PID=3116999 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:33:18] 2025-10-10 15:32:52,097 | INFO     | .. there are 31 such processes running
[2025-10-10 11:33:18] 2025-10-10 15:32:52,097 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:33:18] 2025-10-10 15:32:52,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:33:18] 2025-10-10 15:32:52,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:33:18] 2025-10-10 15:32:52,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695297460032)>', '<ExcThread(monitor, started 139694801147648)>']
[2025-10-10 11:33:18] 2025-10-10 15:32:53,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:33:18] 2025-10-10 15:32:53,103 | INFO     | [monitor] control thread has ended
[2025-10-10 11:33:18] 2025-10-10 15:32:57,401 | INFO     | all workflow threads have been joined
[2025-10-10 11:33:18] 2025-10-10 15:32:57,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:33:18] 2025-10-10 15:32:57,402 | INFO     | traces error code: 0
[2025-10-10 11:33:18] 2025-10-10 15:32:57,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:33:18] 2025-10-10 15:32:58,206 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:33:18] 2025-10-10 15:32:58,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:33:18] 2025-10-10 15:32:58,327 [wrapper] pilotpid: 3116999
[2025-10-10 11:33:18] 2025-10-10 15:32:58,343 [wrapper] Pilot exit status: 0
[2025-10-10 11:33:18] 2025-10-10 15:32:58,474 [wrapper] pandaids: 6830643192
[2025-10-10 11:33:18] 2025-10-10 15:32:59,232 [wrapper] cleanup supervisor_pilot 3821122 3117000
[2025-10-10 11:33:18] 2025-10-10 15:32:59,295 [wrapper] Test setup, not cleaning
[2025-10-10 11:33:18] 2025-10-10 15:32:59,332 [wrapper] apfmon messages muted
[2025-10-10 11:33:18] 2025-10-10 15:32:59,351 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:33:18] 2025-10-10 15:32:59,372 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:33:18]  *** Error codes and diagnostics ***
[2025-10-10 11:33:18]     "exeErrorCode": 0,
[2025-10-10 11:33:18]     "exeErrorDiag": "",
[2025-10-10 11:33:18]     "pilotErrorCode": 0,
[2025-10-10 11:33:18]     "pilotErrorDiag": "",
[2025-10-10 11:33:18]  *** Listing of results directory ***
[2025-10-10 11:33:18] total 394752
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 20:02 queuedata.json
[2025-10-10 11:33:18] -rwx------. 1 boincer umatlas     36292 Oct  4 20:02 runpilot2-wrapper.sh
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 20:02 pilot3.tar.gz
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas       100 Oct 10 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:33:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 08:15 run_atlas
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas       105 Oct 10 08:15 job.xml
[2025-10-10 11:33:18] -rw-r--r--. 2 boincer umatlas 215211150 Oct 10 08:15 EVNT.46376901._002572.pool.root.1
[2025-10-10 11:33:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 08:15 start_atlas.sh
[2025-10-10 11:33:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 08:15 shared
[2025-10-10 11:33:18] -rw-r--r--. 2 boincer umatlas    565596 Oct 10 08:15 input.tar.gz
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas         0 Oct 10 08:15 boinc_lockfile
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas      2519 Oct 10 08:15 pandaJob.out
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas    975517 Oct 10 08:15 agis_schedconf.cvmfs.json
[2025-10-10 11:33:18] drwx------. 4 boincer umatlas      4096 Oct 10 08:15 pilot3
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas      6842 Oct 10 11:28 init_data.xml
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas 181239125 Oct 10 11:30 HITS.46376905._070860.pool.root.1
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas       530 Oct 10 11:30 boinc_task_state.xml
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas      1042 Oct 10 11:31 memory_monitor_summary.json
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas   1560580 Oct 10 11:31 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas    453889 Oct 10 11:31 log.46376905._070860.job.log.tgz.1
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas        95 Oct 10 11:32 pilot_heartbeat.json
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas      7830 Oct 10 11:32 heartbeat.json
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas      5010 Oct 10 11:32 pilotlog.txt
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas   1490357 Oct 10 11:32 log.46376905._070860.job.log.1
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas       357 Oct 10 11:32 output.list
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas       620 Oct 10 11:32 runtime_log
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas   1966080 Oct 10 11:32 result.tar.gz
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas      8711 Oct 10 11:32 runtime_log.err
[2025-10-10 11:33:18] -rw-------. 1 boincer umatlas       657 Oct 10 11:32 3VULDmBORP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK6MNDmvCnpsn.diag
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 11:33 boinc_mmap_file
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas        28 Oct 10 11:33 wrapper_checkpoint.txt
[2025-10-10 11:33:18] -rw-r--r--. 1 boincer umatlas     21005 Oct 10 11:33 stderr.txt
[2025-10-10 11:33:19] HITS file was successfully produced:
[2025-10-10 11:33:19] -rw-------. 1 boincer umatlas 181239125 Oct 10 11:30 shared/HITS.pool.root.1
[2025-10-10 11:33:19]  *** Contents of shared directory: ***
[2025-10-10 11:33:19] total 389656
[2025-10-10 11:33:19] -rw-r--r--. 2 boincer umatlas 215211150 Oct 10 08:15 ATLAS.root_0
[2025-10-10 11:33:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 08:15 start_atlas.sh
[2025-10-10 11:33:19] -rw-r--r--. 2 boincer umatlas    565596 Oct 10 08:15 input.tar.gz
[2025-10-10 11:33:19] -rw-------. 1 boincer umatlas 181239125 Oct 10 11:30 HITS.pool.root.1
[2025-10-10 11:33:19] -rw-------. 1 boincer umatlas   1966080 Oct 10 11:32 result.tar.gz
11:33:20 (3113294): run_atlas exited; CPU time 37989.307413
11:33:20 (3113294): called boinc_finish(0)

</stderr_txt>
]]>

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