Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 02:24:47 (6388): vboxwrapper version 26210
2025-10-11 02:24:47 (6388): BOINC client version: 8.2.4
2025-10-11 02:24:48 (6388): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-11 02:24:48 (6388): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 02:24:48 (6388): Create VM. (boinc_572ecdc74b7e11b1, slot#6)
2025-10-11 02:24:49 (6388): Setting Memory Size for VM. (4400MB)
2025-10-11 02:24:49 (6388): Setting CPU Count for VM. (4)
2025-10-11 02:24:50 (6388): Setting Chipset Options for VM.
2025-10-11 02:24:50 (6388): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 02:24:50 (6388): Setting Boot Options for VM.
2025-10-11 02:24:51 (6388): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 02:24:51 (6388): Enabling VM Network Access.
2025-10-11 02:24:51 (6388): Disabling USB Support for VM.
2025-10-11 02:24:51 (6388): Disabling COM Port Support for VM.
2025-10-11 02:24:52 (6388): Disabling LPT Port Support for VM.
2025-10-11 02:24:52 (6388): Disabling Audio Support for VM.
2025-10-11 02:24:52 (6388): Disabling Clipboard Support for VM.
2025-10-11 02:24:52 (6388): Disabling Drag and Drop Support for VM.
2025-10-11 02:24:53 (6388): Adding storage controller(s) to VM.
2025-10-11 02:24:53 (6388): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 02:24:55 (6388): Adding VirtualBox Guest Additions to VM.
2025-10-11 02:24:55 (6388): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 02:24:55 (6388): forwarding host port 52242 to guest port 80
2025-10-11 02:24:56 (6388): Enabling remote desktop for VM.
2025-10-11 02:24:56 (6388): Enabling shared directory for VM.
2025-10-11 02:24:57 (6388): Starting VM using VBoxManage interface. (boinc_572ecdc74b7e11b1, slot#6)
2025-10-11 02:25:05 (6388): Successfully started VM. (PID = '2576')
2025-10-11 02:25:05 (6388): Reporting VM Process ID to BOINC.
2025-10-11 02:25:05 (6388): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-11 02:25:05 (6388): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 02:25:05 (6388): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 02:25:05 (6388): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 02:25:05 (6388): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 02:25:05 (6388): Detected: Web Application Enabled (http://localhost:52242)
2025-10-11 02:25:05 (6388): Detected: Remote Desktop Enabled (localhost:52243)
2025-10-11 02:25:05 (6388): Preference change detected
2025-10-11 02:25:05 (6388): Setting CPU throttle for VM. (100%)
2025-10-11 02:25:05 (6388): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 02:25:07 (6388): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 02:25:07 (6388): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 02:25:10 (6388): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 02:25:10 (6388): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 02:25:10 (6388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 02:25:21 (6388): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 02:25:21 (6388): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-11 02:25:36 (6388): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.000172 main     Log opened 2025-10-11T02:25:33.886104000Z
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.000333 main     OS Product: Linux
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.000384 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.000419 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.000454 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.000455 main     Process ID: 1313
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.000456 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 02:25:36 (6388): Guest Log: 00:00:00.002027 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 02:25:36 (6388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 02:25:36 (6388): Guest Log: [INFO] Mounting shared directory
2025-10-11 02:25:36 (6388): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 02:25:46 (6388): Guest Log: 00:00:10.005500 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 282 634 000ns (GuestNow=1 760 142 345 607 874 000 ns GuestLast=1 760 149 533 890 508 000 ns fSetTimeLastLoop=true )
2025-10-11 02:26:02 (6388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 02:26:02 (6388): Guest Log: [INFO] Detected branch: prod
2025-10-11 02:26:02 (6388): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 02:26:02 (6388): Guest Log: Copying input files
2025-10-11 02:26:04 (6388): Guest Log: Copied input files into RunAtlas.
2025-10-11 02:26:04 (6388): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 02:26:04 (6388): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 02:26:04 (6388): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 02:26:04 (6388): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 02:26:14 (6388): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 02:26:14 (6388): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 02:26:14 (6388): Guest Log: 2.6.3.0 1596 0 32232 151566 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 02:26:18 (6388): Guest Log: copied the webapp to /var/www
2025-10-11 02:26:18 (6388): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-11 02:26:18 (6388): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-11 02:26:18 (6388): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 02:26:18 (6388): Guest Log:  *** Starting ATLAS job. (PandaID=6837508493 taskID=46676269) ***
2025-10-11 03:24:56 (6388): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 03:49:10 (6388): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 04:29:31 (6388): Status Report: Elapsed Time: '6000.000000'
2025-10-11 04:29:31 (6388): Status Report: CPU Time: '21877.609375'
2025-10-11 04:49:33 (6388): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 07:08:04 (6388): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 07:08:13 (6388): Guest Log: 01:59:51.754576 timesync vgsvcTimeSyncWorker: Radical host time change: 8 321 687 000 000ns (HostNow=1 760 159 293 336 000 000 ns HostLast=1 760 150 971 649 000 000 ns)
2025-10-11 07:08:23 (6388): Guest Log: 02:00:01.760669 timesync vgsvcTimeSyncWorker: Radical guest time change: 8 321 734 584 000ns (GuestNow=1 760 159 303 342 195 000 ns GuestLast=1 760 150 981 607 611 000 ns fSetTimeLastLoop=true )
2025-10-11 08:08:48 (6388): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 20:29:15 (6388): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 20:29:20 (6388): Guest Log: 03:00:32.613919 timesync vgsvcTimeSyncWorker: Radical host time change: 44 436 514 000 000ns (HostNow=1 760 207 360 772 000 000 ns HostLast=1 760 162 924 258 000 000 ns)
2025-10-11 20:29:30 (6388): Guest Log: 03:00:42.644083 timesync vgsvcTimeSyncWorker: Radical guest time change: 44 436 607 642 000ns (GuestNow=1 760 207 370 802 413 000 ns GuestLast=1 760 162 934 194 771 000 ns fSetTimeLastLoop=true )
2025-10-11 20:44:57 (6388): Guest Log:  *** Job finished ***
2025-10-11 20:44:57 (6388): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:31,413 | INFO     | [job] validate thread has finished
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:33,160 | INFO     | [data] queue_monitor thread has finished
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:48,572 | INFO     | [monitor] cgroup control has ended
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:48,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054051620672)>', '<ExcThread(monitor, started 140053246375680)>']
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:49,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:49,246 | INFO     | [monitor] control thread has ended
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:53,824 | INFO     | all workflow threads have been joined
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:53,824 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:53,824 | INFO     | traces error code: 0
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:53,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,020 [wrapper] ==== pilot stdout END ====
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,026 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,033 [wrapper] pilotpid: 6004
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,039 [wrapper] Pilot exit status: 0
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,513 [wrapper] pandaids: 6837508493
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,552 [wrapper] cleanup supervisor_pilot 10068 6005
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,558 [wrapper] Test setup, not cleaning
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,565 [wrapper] apfmon messages muted
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,573 [wrapper] ==== wrapper stdout END ====
2025-10-11 20:44:57 (6388): Guest Log: 2025-10-11 18:44:54,581 [wrapper] ==== wrapper stderr END ====
2025-10-11 20:44:57 (6388): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 20:44:57 (6388): Guest Log:     "exeErrorCode": 0,
2025-10-11 20:44:57 (6388): Guest Log:     "exeErrorDiag": "",
2025-10-11 20:44:57 (6388): Guest Log:     "pilotErrorCode": 0,
2025-10-11 20:44:57 (6388): Guest Log:     "pilotErrorDiag": "",
2025-10-11 20:44:57 (6388): Guest Log:  *** Listing of results directory ***
2025-10-11 20:44:57 (6388): Guest Log: total 200716
2025-10-11 20:44:57 (6388): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 06:56 pilot3.tar.gz
2025-10-11 20:44:57 (6388): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 07:07 queuedata.json
2025-10-11 20:44:57 (6388): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 07:07 runpilot2-wrapper.sh
2025-10-11 20:44:57 (6388): Guest Log: -rwxr-xr-x. 1 atlas atlas      9397 Oct 11 00:26 init_data.xml
2025-10-11 20:44:57 (6388): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct 11 00:26 input.tar.gz
2025-10-11 20:44:57 (6388): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 11 00:26 start_atlas.sh
2025-10-11 20:44:57 (6388): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 00:26 EVNT.46676267._001398.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 20:44:57 (6388): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 11 00:26 pandaJob.out
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas    975525 Oct 11 00:27 agis_schedconf.cvmfs.json
2025-10-11 20:44:57 (6388): Guest Log: drwx------. 5 atlas atlas      4096 Oct 11 00:27 pilot3
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas 197892373 Oct 11 18:43 HITS.46676269._034364.pool.root.1
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas        98 Oct 11 18:43 pilot_heartbeat.json
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 11 18:44 memory_monitor_summary.json
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 18:44 agis_ddmendpoints.agis.ALL.json
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas    358405 Oct 11 18:44 log.46676269._034364.job.log.tgz.1
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas      7797 Oct 11 18:44 heartbeat.json
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 11 18:44 pilotlog.txt
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas   1543021 Oct 11 18:44 log.46676269._034364.job.log.1
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 18:44 output.list
2025-10-11 20:44:57 (6388): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 18:44 runtime_log
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas   1925120 Oct 11 18:44 result.tar.gz
2025-10-11 20:44:57 (6388): Guest Log: -rw-r--r--. 1 atlas atlas      8654 Oct 11 18:44 runtime_log.err
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas       665 Oct 11 18:44 4QBMDmEPMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqhcNDmvH9Lzm.diag
2025-10-11 20:44:57 (6388): Guest Log: Looking for outputfile HITS.46676269._034364.pool.root.1
2025-10-11 20:44:57 (6388): Guest Log: HITS file was successfully produced
2025-10-11 20:44:57 (6388): Guest Log: -rw-------. 1 atlas atlas 197892373 Oct 11 18:43 /home/atlas/RunAtlas/HITS.46676269._034364.pool.root.1
2025-10-11 20:45:00 (6388): Guest Log: Successfully finished the ATLAS job!
2025-10-11 20:45:00 (6388): Guest Log: Copying the results back to the shared directory!
2025-10-11 20:45:01 (6388): Guest Log:  *** Contents of shared directory: ***
2025-10-11 20:45:01 (6388): Guest Log: total 413128
2025-10-11 20:45:01 (6388): Guest Log: -rwxrwxrwx. 1 root root 222619693 Oct 11 00:24 ATLAS.root_0
2025-10-11 20:45:01 (6388): Guest Log: -rwxrwxrwx. 1 root root 197892373 Oct 11 18:44 HITS.pool.root.1
2025-10-11 20:45:01 (6388): Guest Log: -rwxrwxrwx. 1 root root      9397 Oct 11 00:24 init_data.xml
2025-10-11 20:45:01 (6388): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct 10 12:13 input.tar.gz
2025-10-11 20:45:01 (6388): Guest Log: -rwxrwxrwx. 1 root root   1925120 Oct 11 18:45 result.tar.gz
2025-10-11 20:45:01 (6388): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 12:13 start_atlas.sh
2025-10-11 20:45:01 (6388): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 20:45:01 (6388): VM Completion File Detected.
2025-10-11 20:45:01 (6388): Powering off VM.
2025-10-11 20:45:03 (6388): Successfully stopped VM.
2025-10-11 20:45:03 (6388): Deregistering VM. (boinc_572ecdc74b7e11b1, slot#6)
2025-10-11 20:45:03 (6388): Removing network bandwidth throttle group from VM.
2025-10-11 20:45:03 (6388): Removing VM from VirtualBox.
2025-10-11 20:45:08 (6388): called boinc_finish(0)

</stderr_txt>
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