Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:09 (1149933): wrapper (7.7.26015): starting
03:55:09 (1149933): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 03:55:09] Arguments: --nthreads 4
[2025-10-11 03:55:09] Threads: 4
[2025-10-11 03:55:09] Checking for CVMFS
[2025-10-11 03:55:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:55:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:55:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:55:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:55:10] 2.13.2.0 558335 394 49704 151555 3 188 3401333 6144001 1928 130560 0 1194435 99.996 17490 175 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-11 03:55:10] CVMFS is ok
[2025-10-11 03:55:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:55:10] Checking for apptainer binary...
[2025-10-11 03:55:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 03:55:10] Running /usr/bin/apptainer --version
[2025-10-11 03:55:10] apptainer version 1.4.0
[2025-10-11 03:55:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:55:10] Zen
[2025-10-11 03:55:10] apptainer works
[2025-10-11 03:55:10] Set ATHENA_PROC_NUMBER=4
[2025-10-11 03:55:10] Set ATHENA_CORE_NUMBER=4
[2025-10-11 03:55:10] Starting ATLAS job with PandaID=6837377710
[2025-10-11 03:55:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:31:35]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:31:35]  lfn=log.46676269._029417.job.log.tgz.1
[2025-10-11 05:31:35]  mtime=0
[2025-10-11 05:31:35]  protocol_id=None
[2025-10-11 05:31:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 05:31:35]  replicas=None
[2025-10-11 05:31:35]  scope=mc23_13p6TeV
[2025-10-11 05:31:35]  status=None
[2025-10-11 05:31:35]  status_code=0
[2025-10-11 05:31:35]  storage_token=
[2025-10-11 05:31:35]  surl=/home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6837377710/log.46676269._029417.job.log.tgz.1
[2025-10-11 05:31:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/af/log.46676269._029417.job.log.tgz.1
[2025-10-11 05:31:35]  workdir=None
[2025-10-11 05:31:35] ]
[2025-10-11 05:31:35] 2025-10-10 18:30:58,977 | INFO     | transferring file log.46676269._029417.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6837377710/log.46676269._029417.job.log.tgz.1 to /home/mich
[2025-10-11 05:31:35] 2025-10-10 18:30:58,977 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6837377710/log.46676269._029417.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/1/lo
[2025-10-11 05:31:35] 2025-10-10 18:30:58,993 | INFO     | adding to output.list: log.46676269._029417.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/af/log.46676269._029417.job.log.tg
[2025-10-11 05:31:35] 2025-10-10 18:30:58,993 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 05:31:35] 2025-10-10 18:30:58,993 | INFO     | summary of transferred files:
[2025-10-11 05:31:35] 2025-10-10 18:30:58,993 | INFO     |  -- lfn=log.46676269._029417.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 05:31:35] 2025-10-10 18:30:58,993 | INFO     | stage-out finished correctly
[2025-10-11 05:31:35] 2025-10-10 18:30:59,341 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 05:31:35] 2025-10-10 18:30:59,400 | INFO     | job 6837377710 has state=finished
[2025-10-11 05:31:35] 2025-10-10 18:30:59,400 | INFO     | preparing for final server update for job 6837377710 in state='finished'
[2025-10-11 05:31:35] 2025-10-10 18:30:59,400 | INFO     | this job has now completed (state=finished)
[2025-10-11 05:31:35] 2025-10-10 18:30:59,400 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 05:31:35] 2025-10-10 18:30:59,400 | INFO     | log transfer has been attempted: DONE
[2025-10-11 05:31:35] 2025-10-10 18:30:59,400 | INFO     | job 6837377710 has finished - writing final server update
[2025-10-11 05:31:35] 2025-10-10 18:30:59,400 | INFO     | total number of processed events: 400 (read)
[2025-10-11 05:31:35] 2025-10-10 18:30:59,401 | INFO     | executing command: lscpu
[2025-10-11 05:31:35] 2025-10-10 18:30:59,421 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 05:31:35] 2025-10-10 18:30:59,882 | INFO     | time since job start (5740s) is within the limit (172800.0s)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,423 | INFO     | monitor loop #437: job 0:6837377710 is in state 'finished'
[2025-10-11 05:31:35] 2025-10-10 18:31:01,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,672 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 05:31:35] 2025-10-10 18:31:01,674 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4363.765708333334
[2025-10-11 05:31:35] 2025-10-10 18:31:01,676 | INFO     | using path: /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6837377710/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,676 | INFO     | extracted standard info from prmon json
[2025-10-11 05:31:35] 2025-10-10 18:31:01,676 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:31:35] 2025-10-10 18:31:01,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:31:35] 2025-10-10 18:31:01,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:31:35] 2025-10-10 18:31:01,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:31:35] 2025-10-10 18:31:01,677 | INFO     | fitting pss+swap vs Time
[2025-10-11 05:31:35] 2025-10-10 18:31:01,677 | INFO     | sum of square deviations: 204163828.0
[2025-10-11 05:31:35] 2025-10-10 18:31:01,678 | INFO     | sum of deviations: -1840150704.9999998
[2025-10-11 05:31:35] 2025-10-10 18:31:01,678 | INFO     | mean x: 1760118267.0
[2025-10-11 05:31:35] 2025-10-10 18:31:01,678 | INFO     | mean y: 2343942.4137931033
[2025-10-11 05:31:35] 2025-10-10 18:31:01,678 | INFO     | -- intersect: 15866480609.676067
[2025-10-11 05:31:35] 2025-10-10 18:31:01,678 | INFO     | intersect: 15866480609.676067
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | chi2: 0.009811117069970404
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | -- intersect: 15866480609.676067
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | current memory leak: -9.01 B/s (using 87 data points, chi2=0.01)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | could have reported an average CPU frequency of 4324 MHz (7 samples)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | ..............................
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . Timing measurements:
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . get job = 0 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . initial setup = 4 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . payload setup = 3 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . stage-in = 0 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . payload execution = 5719 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . stage-out = 0 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | . log creation = 0 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,679 | INFO     | ..............................
[2025-10-11 05:31:35] 2025-10-10 18:31:01,887 | INFO     | time since job start (5742s) is within the limit (172800.0s)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,967 | INFO     | 
[2025-10-11 05:31:35] 2025-10-10 18:31:01,967 | INFO     | job summary report
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | --------------------------------------------------
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | PanDA job id: 6837377710
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | task id: 46676269
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | errors: (none)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | pilot state: finished 
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | transexitcode: 0
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | exeerrorcode: 0
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | exeerrordiag: 
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | exitcode: 0
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | exitmsg: OK
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | cpuconsumptiontime: 21899 s
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | nevents: 400
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | neventsw: 0
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | pid: 1172782
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | pgrp: 1172782
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | corecount: 4
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | event service: False
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | sizes: {0: 2348866, 3: 2349128, 11: 2349156, 5726: 2384951, 5727: 2384951, 5729: 2385145}
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | --------------------------------------------------
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | 
[2025-10-11 05:31:35] 2025-10-10 18:31:01,968 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/1
[2025-10-11 05:31:35] 2025-10-10 18:31:01,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | job 6837377710 has completed (purged errors)
[2025-10-11 05:31:35] 2025-10-10 18:31:01,982 | INFO     | overall cleanup function is called
[2025-10-11 05:31:35] 2025-10-10 18:31:02,989 | INFO     | --- collectZombieJob: --- 10, [1172782]
[2025-10-11 05:31:35] 2025-10-10 18:31:02,992 | INFO     | zombie collector waiting for pid 1172782
[2025-10-11 05:31:35] 2025-10-10 18:31:02,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:31:35] 2025-10-10 18:31:02,992 | INFO     | collected zombie processes
[2025-10-11 05:31:35] 2025-10-10 18:31:02,992 | INFO     | will attempt to kill all subprocesses of pid=1172782
[2025-10-11 05:31:35] 2025-10-10 18:31:03,084 | INFO     | process IDs to be killed: [1172782] (in reverse order)
[2025-10-11 05:31:35] 2025-10-10 18:31:03,123 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:31:35] 2025-10-10 18:31:03,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:31:35] 2025-10-10 18:31:03,126 | INFO     | did not find any defunct processes belonging to 1172782
[2025-10-11 05:31:35] 2025-10-10 18:31:03,128 | INFO     | did not find any defunct processes belonging to 1172782
[2025-10-11 05:31:35] 2025-10-10 18:31:03,128 | INFO     | ready for new job
[2025-10-11 05:31:35] 2025-10-10 18:31:03,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:31:35] 2025-10-10 18:31:03,129 | INFO     | ***************************************
[2025-10-11 05:31:35] 2025-10-10 18:31:03,129 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:31:35] 2025-10-10 18:31:03,129 | INFO     | ***************************************
[2025-10-11 05:31:35] 2025-10-10 18:31:03,129 | INFO     | 
[2025-10-11 05:31:35] 2025-10-10 18:31:03,130 | INFO     | architecture information:
[2025-10-11 05:31:35] 2025-10-10 18:31:03,130 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:31:35] 2025-10-10 18:31:03,141 | INFO     | cat /etc/os-release:
[2025-10-11 05:31:35] NAME="CentOS Linux"
[2025-10-11 05:31:35] VERSION="7 (Core)"
[2025-10-11 05:31:35] ID="centos"
[2025-10-11 05:31:35] ID_LIKE="rhel fedora"
[2025-10-11 05:31:35] VERSION_ID="7"
[2025-10-11 05:31:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:31:35] ANSI_COLOR="0;31"
[2025-10-11 05:31:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:31:35] HOME_URL="https://www.centos.org/"
[2025-10-11 05:31:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:31:35] 
[2025-10-11 05:31:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:31:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:31:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:31:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:31:35] 
[2025-10-11 05:31:35] 2025-10-10 18:31:03,141 | INFO     | ***************************************
[2025-10-11 05:31:35] 2025-10-10 18:31:03,644 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/1
[2025-10-11 05:31:35] 2025-10-10 18:31:03,654 | INFO     | sufficient remaining disk space (207002533888 B)
[2025-10-11 05:31:35] 2025-10-10 18:31:03,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:31:35] 2025-10-10 18:31:03,654 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:31:35] 2025-10-10 18:31:03,654 | INFO     | update_server=False
[2025-10-11 05:31:35] 2025-10-10 18:31:03,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:31:35] 2025-10-10 18:31:03,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:31:35] 2025-10-10 18:31:03,655 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 05:31:35] 2025-10-10 18:31:03,655 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:31:35] 2025-10-10 18:31:03,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:31:35] 2025-10-10 18:31:03,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:31:35] 2025-10-10 18:31:03,833 | INFO     | all payload control threads have been joined
[2025-10-11 05:31:35] 2025-10-10 18:31:03,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 05:31:35] 2025-10-10 18:31:03,927 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 05:31:35] 2025-10-10 18:31:03,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:31:35] 2025-10-10 18:31:03,927 | INFO     | will abort loop
[2025-10-11 05:31:35] 2025-10-10 18:31:04,017 | INFO     | job.realtimelogging is not enabled
[2025-10-11 05:31:35] 2025-10-10 18:31:04,435 | INFO     | all data control threads have been joined
[2025-10-11 05:31:35] 2025-10-10 18:31:04,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:31:35] 2025-10-10 18:31:04,659 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:04,661 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:04,809 | INFO     | all job control threads have been joined
[2025-10-11 05:31:35] 2025-10-10 18:31:04,838 | INFO     | [payload] control thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:04,931 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,022 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,376 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:31:35] 2025-10-10 18:31:05,440 | INFO     | [data] control thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,476 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,548 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,814 | INFO     | [job] control thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,983 | INFO     | [job] validate thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,983 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,988 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:05,997 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:06,564 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:09,411 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:31:35] 2025-10-10 18:31:28,114 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:31:35] 2025-10-10 18:31:30,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138461110265664)>', '<ExcThread(monitor, started 138460476204800)>']
[2025-10-11 05:31:35] 2025-10-10 18:31:30,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:31:35] 2025-10-10 18:31:30,789 | INFO     | [monitor] control thread has ended
[2025-10-11 05:31:35] 2025-10-10 18:31:35,067 | INFO     | all workflow threads have been joined
[2025-10-11 05:31:35] 2025-10-10 18:31:35,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:31:35] 2025-10-10 18:31:35,067 | INFO     | traces error code: 0
[2025-10-11 05:31:35] 2025-10-10 18:31:35,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:31:35] 2025-10-10 18:31:35,127 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:31:35] 2025-10-10 18:31:35,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:31:35] 2025-10-10 18:31:35,131 [wrapper] pilotpid: 1155202
[2025-10-11 05:31:35] 2025-10-10 18:31:35,132 [wrapper] Pilot exit status: 0
[2025-10-11 05:31:35] 2025-10-10 18:31:35,141 [wrapper] pandaids: 6837377710
[2025-10-11 05:31:35] 2025-10-10 18:31:35,168 [wrapper] cleanup supervisor_pilot 1240097 1155203
[2025-10-11 05:31:35] 2025-10-10 18:31:35,169 [wrapper] Test setup, not cleaning
[2025-10-11 05:31:35] 2025-10-10 18:31:35,171 [wrapper] apfmon messages muted
[2025-10-11 05:31:35] 2025-10-10 18:31:35,173 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:31:35] 2025-10-10 18:31:35,174 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:31:35]  *** Error codes and diagnostics ***
[2025-10-11 05:31:35]     "exeErrorCode": 0,
[2025-10-11 05:31:35]     "exeErrorDiag": "",
[2025-10-11 05:31:35]     "pilotErrorCode": 0,
[2025-10-11 05:31:35]     "pilotErrorDiag": "",
[2025-10-11 05:31:35]  *** Listing of results directory ***
[2025-10-11 05:31:35] total 407624
[2025-10-11 05:31:35] -rw-r--r-- 1 michael michael    557409 Oct 10 11:42 pilot3.tar.gz
[2025-10-11 05:31:35] -rw-r--r-- 1 michael michael      5112 Oct 10 12:01 queuedata.json
[2025-10-11 05:31:35] -rwx------ 1 michael michael     36292 Oct 10 12:02 runpilot2-wrapper.sh
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael       100 Oct 11 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:31:35] -rwxr-xr-x 1 michael michael      7986 Oct 11 03:55 run_atlas
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael       105 Oct 11 03:55 job.xml
[2025-10-11 05:31:35] -rw-r--r-- 2 michael michael 220946620 Oct 11 03:55 EVNT.46676267._001201.pool.root.1
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael      9816 Oct 11 03:55 init_data.xml
[2025-10-11 05:31:35] drwxrwx--x 2 michael michael      4096 Oct 11 03:55 shared
[2025-10-11 05:31:35] -rw-r--r-- 2 michael michael    569684 Oct 11 03:55 input.tar.gz
[2025-10-11 05:31:35] -rw-r--r-- 2 michael michael     15120 Oct 11 03:55 start_atlas.sh
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael         0 Oct 11 03:55 boinc_lockfile
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael      2549 Oct 11 03:55 pandaJob.out
[2025-10-11 05:31:35] -rw------- 1 michael michael    975525 Oct 11 03:55 agis_schedconf.cvmfs.json
[2025-10-11 05:31:35] -rw------- 1 michael michael   1560580 Oct 11 03:55 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:31:35] drwx------ 5 michael michael      4096 Oct 11 03:55 pilot3
[2025-10-11 05:31:35] -rw------- 1 michael michael        95 Oct 11 05:30 pilot_heartbeat.json
[2025-10-11 05:31:35] -rw------- 1 michael michael 190288277 Oct 11 05:30 HITS.46676269._029417.pool.root.1
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael       529 Oct 11 05:30 boinc_task_state.xml
[2025-10-11 05:31:35] -rw------- 1 michael michael      1020 Oct 11 05:30 memory_monitor_summary.json
[2025-10-11 05:31:35] -rw------- 1 michael michael    271007 Oct 11 05:30 log.46676269._029417.job.log.tgz.1
[2025-10-11 05:31:35] -rw------- 1 michael michael      7722 Oct 11 05:31 heartbeat.json
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael      8192 Oct 11 05:31 boinc_mmap_file
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael        27 Oct 11 05:31 wrapper_checkpoint.txt
[2025-10-11 05:31:35] -rw------- 1 michael michael      4822 Oct 11 05:31 pilotlog.txt
[2025-10-11 05:31:35] -rw------- 1 michael michael    859778 Oct 11 05:31 log.46676269._029417.job.log.1
[2025-10-11 05:31:35] -rw------- 1 michael michael       357 Oct 11 05:31 output.list
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael       620 Oct 11 05:31 runtime_log
[2025-10-11 05:31:35] -rw------- 1 michael michael   1146880 Oct 11 05:31 result.tar.gz
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael      8797 Oct 11 05:31 runtime_log.err
[2025-10-11 05:31:35] -rw------- 1 michael michael       640 Oct 11 05:31 MyGKDmnhGR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvqbNDm3W12Bo.diag
[2025-10-11 05:31:35] -rw-rw-r-- 1 michael michael     21248 Oct 11 05:31 stderr.txt
[2025-10-11 05:31:35] HITS file was successfully produced:
[2025-10-11 05:31:35] -rw------- 1 michael michael 190288277 Oct 11 05:30 shared/HITS.pool.root.1
[2025-10-11 05:31:35]  *** Contents of shared directory: ***
[2025-10-11 05:31:35] total 403308
[2025-10-11 05:31:35] -rw-r--r-- 2 michael michael 220946620 Oct 11 03:55 ATLAS.root_0
[2025-10-11 05:31:35] -rw-r--r-- 2 michael michael    569684 Oct 11 03:55 input.tar.gz
[2025-10-11 05:31:35] -rw-r--r-- 2 michael michael     15120 Oct 11 03:55 start_atlas.sh
[2025-10-11 05:31:35] -rw------- 1 michael michael 190288277 Oct 11 05:30 HITS.pool.root.1
[2025-10-11 05:31:35] -rw------- 1 michael michael   1146880 Oct 11 05:31 result.tar.gz
05:31:36 (1149933): run_atlas exited; CPU time 21949.156760
05:31:36 (1149933): called boinc_finish(0)

</stderr_txt>
]]>

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