Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:53:09 (2394470): wrapper (7.7.26015): starting
07:53:09 (2394470): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 07:53:09] Arguments: --nthreads 8
[2025-10-10 07:53:09] Threads: 8
[2025-10-10 07:53:09] Checking for CVMFS
[2025-10-10 07:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 07:53:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 07:53:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 07:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 07:53:10] 2.13.2.0 3269412 32812 366208 151545 1 445 39950497 40960000 50819 16776704 0 407382592 99.836 174255508 37053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 07:53:10] CVMFS is ok
[2025-10-10 07:53:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 07:53:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 07:53:10] Further information can be found at the LHC@home message board.
[2025-10-10 07:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 07:53:10] Checking for apptainer binary...
[2025-10-10 07:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 07:53:10] Running /usr/bin/apptainer --version
[2025-10-10 07:53:10] apptainer version 1.4.3-1.el9
[2025-10-10 07:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 07:53:10] c8-16-2.aglt2.org
[2025-10-10 07:53:10] apptainer works
[2025-10-10 07:53:10] Set ATHENA_PROC_NUMBER=8
[2025-10-10 07:53:10] Set ATHENA_CORE_NUMBER=8
[2025-10-10 07:53:10] Starting ATLAS job with PandaID=6830696382
[2025-10-10 07:53:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 09:08:57]  *** The last 200 lines of the pilot log: ***
[2025-10-10 09:08:57] 2025-10-10 13:07:42,506 | WARNING  | process 2412313 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 09:08:57] 2025-10-10 13:07:42,507 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6830696382/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 09:08:57] 2025-10-10 13:07:43,609 | INFO     | number of running child processes to parent process 2412313: 1
[2025-10-10 09:08:57] 2025-10-10 13:07:43,609 | INFO     | maximum number of monitored processes: 6
[2025-10-10 09:08:57] 2025-10-10 13:07:44,327 | INFO     | time since job start (4442s) is within the limit (172800.0s)
[2025-10-10 09:08:57] 2025-10-10 13:07:44,848 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 09:08:57] 2025-10-10 13:07:46,114 | INFO     | monitor loop #307: job 0:6830696382 is in state 'finished'
[2025-10-10 09:08:57] 2025-10-10 13:07:46,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 09:08:57] 2025-10-10 13:07:46,334 | INFO     | time since job start (4444s) is within the limit (172800.0s)
[2025-10-10 09:08:57] 2025-10-10 13:07:47,928 | INFO     | job 6830696382 has state=finished
[2025-10-10 09:08:57] 2025-10-10 13:07:47,928 | INFO     | preparing for final server update for job 6830696382 in state='finished'
[2025-10-10 09:08:57] 2025-10-10 13:07:47,928 | INFO     | this job has now completed (state=finished)
[2025-10-10 09:08:57] 2025-10-10 13:07:47,928 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 09:08:57] 2025-10-10 13:07:47,928 | INFO     | log transfer has been attempted: DONE
[2025-10-10 09:08:57] 2025-10-10 13:07:47,928 | INFO     | job 6830696382 has finished - writing final server update
[2025-10-10 09:08:57] 2025-10-10 13:07:47,928 | INFO     | total number of processed events: 400 (read)
[2025-10-10 09:08:57] 2025-10-10 13:07:47,929 | INFO     | executing command: lscpu
[2025-10-10 09:08:57] 2025-10-10 13:07:48,005 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 09:08:57] 2025-10-10 13:07:48,629 | INFO     | monitor loop #308: job 0:6830696382 is in state 'finished'
[2025-10-10 09:08:57] 2025-10-10 13:07:48,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 09:08:57] 2025-10-10 13:07:48,861 | INFO     | PID=2399292 has CPU usage=16.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 09:08:57] 2025-10-10 13:07:48,861 | INFO     | .. there are 61 such processes running
[2025-10-10 09:08:57] 2025-10-10 13:07:49,862 | INFO     | time since job start (4447s) is within the limit (172800.0s)
[2025-10-10 09:08:57] 2025-10-10 13:07:51,137 | INFO     | monitor loop #309: job 0:6830696382 is in state 'finished'
[2025-10-10 09:08:57] 2025-10-10 13:07:51,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 09:08:57] 2025-10-10 13:07:51,869 | INFO     | time since job start (4449s) is within the limit (172800.0s)
[2025-10-10 09:08:57] 2025-10-10 13:07:53,649 | INFO     | monitor loop #310: job 0:6830696382 is in state 'finished'
[2025-10-10 09:08:57] 2025-10-10 13:07:53,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 09:08:57] 2025-10-10 13:07:53,876 | INFO     | time since job start (4451s) is within the limit (172800.0s)
[2025-10-10 09:08:57] 2025-10-10 13:07:55,885 | INFO     | time since job start (4453s) is within the limit (172800.0s)
[2025-10-10 09:08:57] 2025-10-10 13:07:56,154 | INFO     | monitor loop #311: job 0:6830696382 is in state 'finished'
[2025-10-10 09:08:57] 2025-10-10 13:07:56,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 09:08:57] 2025-10-10 13:07:57,892 | INFO     | time since job start (4455s) is within the limit (172800.0s)
[2025-10-10 09:08:57] 2025-10-10 13:07:58,671 | INFO     | monitor loop #312: job 0:6830696382 is in state 'finished'
[2025-10-10 09:08:57] 2025-10-10 13:07:58,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 09:08:57] 2025-10-10 13:07:59,560 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 09:08:57] 2025-10-10 13:07:59,565 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9899843749977
[2025-10-10 09:08:57] 2025-10-10 13:07:59,579 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6830696382/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 09:08:57] 2025-10-10 13:07:59,579 | INFO     | extracted standard info from prmon json
[2025-10-10 09:08:57] 2025-10-10 13:07:59,580 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 09:08:57] 2025-10-10 13:07:59,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 09:08:57] 2025-10-10 13:07:59,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 09:08:57] 2025-10-10 13:07:59,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | fitting pss+swap vs Time
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | sum of square deviations: 81266640.0
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | sum of deviations: 876327067.5
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | mean x: 1760099590.5
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | mean y: 2148493.609375
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | -- intersect: -18977631064.777878
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | intersect: -18977631064.777878
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | chi2: 0.044272572844788784
[2025-10-10 09:08:57] 2025-10-10 13:07:59,581 | INFO     | -- intersect: -18977631064.777878
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | current memory leak: 10.78 B/s (using 64 data points, chi2=0.04)
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | could have reported an average CPU frequency of 3798 MHz (6 samples)
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | ..............................
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . Timing measurements:
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . get job = 0 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . initial setup = 2 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . payload setup = 45 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . stage-in = 0 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . payload execution = 4323 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . stage-out = 0 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | . log creation = 0 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,582 | INFO     | ..............................
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | 
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | job summary report
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | --------------------------------------------------
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | PanDA job id: 6830696382
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | task id: 46376905
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | errors: (none)
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | pilot state: finished 
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | transexitcode: 0
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | exeerrorcode: 0
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | exeerrordiag: 
[2025-10-10 09:08:57] 2025-10-10 13:07:59,692 | INFO     | exitcode: 0
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | exitmsg: OK
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | cpuconsumptiontime: 19139 s
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | nevents: 400
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | neventsw: 0
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | pid: 2412313
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | pgrp: 2412313
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | corecount: 8
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | event service: False
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | sizes: {0: 2348643, 1: 2348842, 11: 2348842, 22: 2348870, 24: 2349160, 33: 2349188, 4373: 2375444, 4375: 2384442, 4378: 2384498, 4393: 2384692}
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | --------------------------------------------------
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | 
[2025-10-10 09:08:57] 2025-10-10 13:07:59,693 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-10 09:08:57] 2025-10-10 13:07:59,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 09:08:57] 2025-10-10 13:07:59,741 | INFO     | job 6830696382 has completed (purged errors)
[2025-10-10 09:08:57] 2025-10-10 13:07:59,741 | INFO     | overall cleanup function is called
[2025-10-10 09:08:57] 2025-10-10 13:08:00,749 | INFO     | --- collectZombieJob: --- 10, [2412313]
[2025-10-10 09:08:57] 2025-10-10 13:08:00,749 | INFO     | zombie collector waiting for pid 2412313
[2025-10-10 09:08:57] 2025-10-10 13:08:00,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 09:08:57] 2025-10-10 13:08:00,749 | INFO     | collected zombie processes
[2025-10-10 09:08:57] 2025-10-10 13:08:00,749 | INFO     | will attempt to kill all subprocesses of pid=2412313
[2025-10-10 09:08:57] 2025-10-10 13:08:02,007 | INFO     | process IDs to be killed: [2412313] (in reverse order)
[2025-10-10 09:08:57] 2025-10-10 13:08:02,284 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 09:08:57] 2025-10-10 13:08:02,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 09:08:57] 2025-10-10 13:08:02,343 | INFO     | did not find any defunct processes belonging to 2412313
[2025-10-10 09:08:57] 2025-10-10 13:08:02,434 | INFO     | did not find any defunct processes belonging to 2412313
[2025-10-10 09:08:57] 2025-10-10 13:08:02,434 | INFO     | ready for new job
[2025-10-10 09:08:57] 2025-10-10 13:08:02,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 09:08:57] 2025-10-10 13:08:02,439 | INFO     | ***************************************
[2025-10-10 09:08:57] 2025-10-10 13:08:02,440 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 09:08:57] 2025-10-10 13:08:02,440 | INFO     | ***************************************
[2025-10-10 09:08:57] 2025-10-10 13:08:02,440 | INFO     | 
[2025-10-10 09:08:57] 2025-10-10 13:08:02,449 | INFO     | architecture information:
[2025-10-10 09:08:57] 2025-10-10 13:08:02,450 | INFO     | executing command: cat /etc/os-release
[2025-10-10 09:08:57] 2025-10-10 13:08:02,487 | INFO     | cat /etc/os-release:
[2025-10-10 09:08:57] NAME="CentOS Linux"
[2025-10-10 09:08:57] VERSION="7 (Core)"
[2025-10-10 09:08:57] ID="centos"
[2025-10-10 09:08:57] ID_LIKE="rhel fedora"
[2025-10-10 09:08:57] VERSION_ID="7"
[2025-10-10 09:08:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 09:08:57] ANSI_COLOR="0;31"
[2025-10-10 09:08:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 09:08:57] HOME_URL="https://www.centos.org/"
[2025-10-10 09:08:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 09:08:57] 
[2025-10-10 09:08:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 09:08:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 09:08:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 09:08:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 09:08:57] 
[2025-10-10 09:08:57] 2025-10-10 13:08:02,487 | INFO     | ***************************************
[2025-10-10 09:08:57] 2025-10-10 13:08:02,991 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-10 09:08:57] 2025-10-10 13:08:03,044 | INFO     | sufficient remaining disk space (166463537152 B)
[2025-10-10 09:08:57] 2025-10-10 13:08:03,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 09:08:57] 2025-10-10 13:08:03,045 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 09:08:57] 2025-10-10 13:08:03,045 | INFO     | update_server=False
[2025-10-10 09:08:57] 2025-10-10 13:08:03,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 09:08:57] 2025-10-10 13:08:03,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 09:08:57] 2025-10-10 13:08:03,048 | INFO     | aborting loop
[2025-10-10 09:08:57] 2025-10-10 13:08:03,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 09:08:57] 2025-10-10 13:08:03,773 | INFO     | all payload control threads have been joined
[2025-10-10 09:08:57] 2025-10-10 13:08:03,894 | INFO     | all data control threads have been joined
[2025-10-10 09:08:57] 2025-10-10 13:08:03,982 | INFO     | all job control threads have been joined
[2025-10-10 09:08:57] 2025-10-10 13:08:04,051 | INFO     | [job] retrieve thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,067 | INFO     | [job] job monitor thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 09:08:57] 2025-10-10 13:08:04,637 | INFO     | [data] copytool_in thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,647 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 09:08:57] 2025-10-10 13:08:04,716 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,779 | INFO     | [payload] control thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,815 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,850 | INFO     | [job] validate thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,900 | INFO     | [data] control thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,945 | INFO     | [payload] validate_post thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:04,987 | INFO     | [job] control thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:05,075 | INFO     | [data] copytool_out thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:05,450 | INFO     | [payload] failed_post thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:05,717 | INFO     | [job] queue monitor thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:08,530 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 09:08:57] 2025-10-10 13:08:32,290 | INFO     | PID=2399292 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 09:08:57] 2025-10-10 13:08:32,311 | INFO     | .. there are 60 such processes running
[2025-10-10 09:08:57] 2025-10-10 13:08:32,311 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 09:08:57] 2025-10-10 13:08:32,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 09:08:57] 2025-10-10 13:08:32,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 09:08:57] 2025-10-10 13:08:39,597 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-10 09:08:57] 2025-10-10 13:08:50,038 | INFO     | [monitor] cgroup control has ended
[2025-10-10 09:08:57] 2025-10-10 13:08:51,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815058671424)>', '<ExcThread(monitor, started 139814716294912)>']
[2025-10-10 09:08:57] 2025-10-10 13:08:52,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 09:08:57] 2025-10-10 13:08:52,474 | INFO     | [monitor] control thread has ended
[2025-10-10 09:08:57] 2025-10-10 13:08:56,942 | INFO     | all workflow threads have been joined
[2025-10-10 09:08:57] 2025-10-10 13:08:56,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 09:08:57] 2025-10-10 13:08:56,942 | INFO     | traces error code: 0
[2025-10-10 09:08:57] 2025-10-10 13:08:56,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 09:08:57] 2025-10-10 13:08:57,072 [wrapper] ==== pilot stdout END ====
[2025-10-10 09:08:57] 2025-10-10 13:08:57,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 09:08:57] 2025-10-10 13:08:57,096 [wrapper] pilotpid: 2399292
[2025-10-10 09:08:57] 2025-10-10 13:08:57,103 [wrapper] Pilot exit status: 0
[2025-10-10 09:08:57] 2025-10-10 13:08:57,114 [wrapper] pandaids: 6830696382
[2025-10-10 09:08:57] 2025-10-10 13:08:57,277 [wrapper] cleanup supervisor_pilot 3359260 2399293
[2025-10-10 09:08:57] 2025-10-10 13:08:57,321 [wrapper] Test setup, not cleaning
[2025-10-10 09:08:57] 2025-10-10 13:08:57,326 [wrapper] apfmon messages muted
[2025-10-10 09:08:57] 2025-10-10 13:08:57,329 [wrapper] ==== wrapper stdout END ====
[2025-10-10 09:08:57] 2025-10-10 13:08:57,332 [wrapper] ==== wrapper stderr END ====
[2025-10-10 09:08:57]  *** Error codes and diagnostics ***
[2025-10-10 09:08:57]     "exeErrorCode": 0,
[2025-10-10 09:08:57]     "exeErrorDiag": "",
[2025-10-10 09:08:57]     "pilotErrorCode": 0,
[2025-10-10 09:08:57]     "pilotErrorDiag": "",
[2025-10-10 09:08:57]  *** Listing of results directory ***
[2025-10-10 09:08:57] total 386052
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 21:02 pilot3.tar.gz
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 21:21 queuedata.json
[2025-10-10 09:08:57] -rwx------. 1 boincer umatlas     36292 Oct  4 21:22 runpilot2-wrapper.sh
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas       100 Oct 10 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 09:08:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 07:53 run_atlas
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas       105 Oct 10 07:53 job.xml
[2025-10-10 09:08:57] -rw-r--r--. 2 boincer umatlas 215716698 Oct 10 07:53 EVNT.46376901._002635.pool.root.1
[2025-10-10 09:08:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 07:53 start_atlas.sh
[2025-10-10 09:08:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 07:53 shared
[2025-10-10 09:08:57] -rw-r--r--. 2 boincer umatlas    565605 Oct 10 07:53 input.tar.gz
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas         0 Oct 10 07:53 boinc_lockfile
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas      2518 Oct 10 07:53 pandaJob.out
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas    975517 Oct 10 07:53 agis_schedconf.cvmfs.json
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas   1560580 Oct 10 07:53 agis_ddmendpoints.agis.ALL.json
[2025-10-10 09:08:57] drwx------. 4 boincer umatlas      4096 Oct 10 07:53 pilot3
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas      7162 Oct 10 09:01 init_data.xml
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas 173864573 Oct 10 09:07 HITS.46376905._072382.pool.root.1
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas       530 Oct 10 09:07 boinc_task_state.xml
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas      1034 Oct 10 09:07 memory_monitor_summary.json
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas    308337 Oct 10 09:07 log.46376905._072382.job.log.tgz.1
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas      7778 Oct 10 09:07 heartbeat.json
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas        95 Oct 10 09:08 pilot_heartbeat.json
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 09:08 boinc_mmap_file
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas        27 Oct 10 09:08 wrapper_checkpoint.txt
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas      4825 Oct 10 09:08 pilotlog.txt
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas    613775 Oct 10 09:08 log.46376905._072382.job.log.1
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas       357 Oct 10 09:08 output.list
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas       620 Oct 10 09:08 runtime_log
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas    942080 Oct 10 09:08 result.tar.gz
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas      8698 Oct 10 09:08 runtime_log.err
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas       651 Oct 10 09:08 fBaNDmHdSP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrLNNDmehfVOm.diag
[2025-10-10 09:08:57] -rw-r--r--. 1 boincer umatlas     22305 Oct 10 09:08 stderr.txt
[2025-10-10 09:08:57] HITS file was successfully produced:
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas 173864573 Oct 10 09:07 shared/HITS.pool.root.1
[2025-10-10 09:08:57]  *** Contents of shared directory: ***
[2025-10-10 09:08:57] total 381952
[2025-10-10 09:08:57] -rw-r--r--. 2 boincer umatlas 215716698 Oct 10 07:53 ATLAS.root_0
[2025-10-10 09:08:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 07:53 start_atlas.sh
[2025-10-10 09:08:57] -rw-r--r--. 2 boincer umatlas    565605 Oct 10 07:53 input.tar.gz
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas 173864573 Oct 10 09:07 HITS.pool.root.1
[2025-10-10 09:08:57] -rw-------. 1 boincer umatlas    942080 Oct 10 09:08 result.tar.gz
09:08:58 (2394470): run_atlas exited; CPU time 19300.339083
09:08:58 (2394470): called boinc_finish(0)

</stderr_txt>
]]>

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