| Name | PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm_2 |
| Workunit | 235773940 |
| Created | 10 Oct 2025, 9:14:54 UTC |
| Sent | 10 Oct 2025, 11:49:55 UTC |
| Report deadline | 18 Oct 2025, 11:49:55 UTC |
| Received | 20 Oct 2025, 19:32:02 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 10854861 |
| Run time | 4 min 36 sec |
| CPU time | 9 hours 49 min 11 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 18.09 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.47 GB |
| Peak swap size | 39.63 GB |
| Peak disk usage | 418.79 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
07:50:30 (2046325): wrapper (7.7.26015): starting
07:50:30 (2046325): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 07:50:30] Arguments: --nthreads 4
[2025-10-11 07:50:30] Threads: 4
[2025-10-11 07:50:30] Checking for CVMFS
[2025-10-11 07:50:30] No cvmfs_config command found, will try listing directly
[2025-10-11 07:50:30] CVMFS is ok
[2025-10-11 07:50:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:50:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:50:30] Further information can be found at the LHC@home message board.
[2025-10-11 07:50:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:50:30] Checking for apptainer binary...
[2025-10-11 07:50:30] which: no apptainer in ((null))
[2025-10-11 07:50:30] apptainer is not installed, using version from CVMFS
[2025-10-11 07:50:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:50:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-11 07:50:30] apptainer works
[2025-10-11 07:50:30] Set ATHENA_PROC_NUMBER=4
[2025-10-11 07:50:30] Set ATHENA_CORE_NUMBER=4
[2025-10-11 07:50:30] Starting ATLAS job with PandaID=6837397605
[2025-10-11 07:50:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:41:38 (3719472): wrapper (7.7.26015): starting
02:41:38 (3719472): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 02:41:38] Arguments: --nthreads 4
[2025-10-18 02:41:38] Threads: 4
[2025-10-18 02:41:38] This job has been restarted, cleaning up previous attempt
[2025-10-18 02:41:38] Checking for CVMFS
[2025-10-18 02:41:38] No cvmfs_config command found, will try listing directly
[2025-10-18 02:41:38] CVMFS is ok
[2025-10-18 02:41:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 02:41:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 02:41:38] Further information can be found at the LHC@home message board.
[2025-10-18 02:41:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 02:41:38] Checking for apptainer binary...
[2025-10-18 02:41:38] which: no apptainer in ((null))
[2025-10-18 02:41:38] apptainer is not installed, using version from CVMFS
[2025-10-18 02:41:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 02:41:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-18 02:41:39] apptainer works
[2025-10-18 02:41:39] Set ATHENA_PROC_NUMBER=4
[2025-10-18 02:41:39] Set ATHENA_CORE_NUMBER=4
[2025-10-18 02:41:39] Starting ATLAS job with PandaID=6837397605
[2025-10-18 02:41:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 02:48:32] Job failed
[2025-10-18 02:48:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-10-18 02:48:32] ++ pwd
[2025-10-18 02:48:32] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/0/
[2025-10-18 02:48:32] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/0/
[2025-10-18 02:48:32] + mv ATLAS.root_0 EVNT.46676267._001251.pool.root.1
[2025-10-18 02:48:32] mv: 'ATLAS.root_0' and 'EVNT.46676267._001251.pool.root.1' are the same file
[2025-10-18 02:48:32] + tar --strip-components=5 -xvf input.tar.gz
[2025-10-18 02:48:32] + umask 077
[2025-10-18 02:48:32] ++ date +%s
[2025-10-18 02:48:32] + ACCOUNTING_STARTTIME=1760748099
[2025-10-18 02:48:32] + echo 'Detecting resource accounting method available for the job.'
[2025-10-18 02:48:32] Detecting resource accounting method available for the job.
[2025-10-18 02:48:32] + JOB_ACCOUNTING=
[2025-10-18 02:48:32] + command -v arc-job-cgroup
[2025-10-18 02:48:32] + '[' -z '' ']'
[2025-10-18 02:48:32] + GNU_TIME=/usr/bin/time
[2025-10-18 02:48:32] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-10-18 02:48:32] Looking for /usr/bin/time tool for accounting measurements
[2025-10-18 02:48:32] + '[' '!' -z /usr/bin/time ']'
[2025-10-18 02:48:32] + /usr/bin/time --version
[2025-10-18 02:48:32] + echo 'GNU time found and will be used for job accounting.'
[2025-10-18 02:48:32] GNU time found and will be used for job accounting.
[2025-10-18 02:48:32] + JOB_ACCOUNTING=gnutime
[2025-10-18 02:48:32] + '[' -z gnutime ']'
[2025-10-18 02:48:32] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-18 02:48:32] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-18 02:48:32] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-10/BOINC_MCORE/6837397605.out
[2025-10-18 02:48:32] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-10/BOINC_MCORE/6837397605.out
[2025-10-18 02:48:32] + export PILOT_NOKILL=YES
[2025-10-18 02:48:32] + PILOT_NOKILL=YES
[2025-10-18 02:48:32] + export GRID_GLOBAL_JOBID=PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-18 02:48:32] + GRID_GLOBAL_JOBID=PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-18 02:48:32] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-18 02:48:32] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-18 02:48:32] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-18 02:48:32] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-18 02:48:32] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-10-18 02:48:32] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-10-18 02:48:32] ++ pwd
[2025-10-18 02:48:32] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot56/slots/0
[2025-10-18 02:48:32] + RUNTIME_JOB_STDIN=/dev/null
[2025-10-18 02:48:32] ++ pwd
[2025-10-18 02:48:32] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot56/slots/0/log.46676269._030685.job.log.1
[2025-10-18 02:48:32] ++ pwd
[2025-10-18 02:48:32] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot56/slots/0/log.46676269._030685.job.log.1
[2025-10-18 02:48:32] ++ pwd
[2025-10-18 02:48:32] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/0.diag
[2025-10-18 02:48:32] + '[' '!' -z '' ']'
[2025-10-18 02:48:32] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-10-18 02:48:32] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-10-18 02:48:32] + RUNTIME_FRONTEND_SEES_NODE=
[2025-10-18 02:48:32] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-10-18 02:48:32] + '[' '!' -z '' ']'
[2025-10-18 02:48:32] + '[' -z yes ']'
[2025-10-18 02:48:32] ++ pwd
[2025-10-18 02:48:32] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-18 02:48:32] + runtimeenvironments=
[2025-10-18 02:48:32] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-18 02:48:32] + RTE_function_0 1
[2025-10-18 02:48:32] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-18 02:48:32] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-18 02:48:32] + export BOINC_APP=ATLAS
[2025-10-18 02:48:32] + BOINC_APP=ATLAS
[2025-10-18 02:48:32] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-18 02:48:32] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-18 02:48:32] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-18 02:48:32] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-18 02:48:32] + '[' -z 1 ']'
[2025-10-18 02:48:32] + '[' 1 == 1 ']'
[2025-10-18 02:48:32] + shift
[2025-10-18 02:48:32] + export SITE_NAME=BOINC
[2025-10-18 02:48:32] + SITE_NAME=BOINC
[2025-10-18 02:48:32] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/0/
[2025-10-18 02:48:32] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/0/
[2025-10-18 02:48:32] + '[' 0 -ne 0 ']'
[2025-10-18 02:48:32] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-10-18 02:48:32] + '[' -f /etc/os-release ']'
[2025-10-18 02:48:32] +++ cat /etc/os-release
[2025-10-18 02:48:32] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-10-18 02:48:32] +++ NAME='CentOS Linux'
[2025-10-18 02:48:32] +++ VERSION='7 (Core)'
[2025-10-18 02:48:32] +++ ID=centos
[2025-10-18 02:48:32] +++ ID_LIKE='rhel fedora'
[2025-10-18 02:48:32] +++ VERSION_ID=7
[2025-10-18 02:48:32] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-10-18 02:48:32] +++ ANSI_COLOR='0;31'
[2025-10-18 02:48:32] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-10-18 02:48:32] +++ HOME_URL=https://www.centos.org/
[2025-10-18 02:48:32] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-10-18 02:48:32] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-10-18 02:48:32] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-10-18 02:48:32] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-10-18 02:48:32] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-10-18 02:48:32] ++ echo 'CentOS Linux 7 (Core)'
[2025-10-18 02:48:32] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-10-18 02:48:32] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-10-18 02:48:32] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-10-18 02:48:32] + HOME=/scratch/boinc/var/slot56/slots/0
[2025-10-18 02:48:32] + export HOME
[2025-10-18 02:48:32] + cd /scratch/boinc/var/slot56/slots/0
[2025-10-18 02:48:32] + '[' '!' -z '' ']'
[2025-10-18 02:48:32] + '[' -z '' ']'
[2025-10-18 02:48:32] ++ /bin/hostname -f
[2025-10-18 02:48:32] + nodename=skurut14.grid.cesnet.cz
[2025-10-18 02:48:32] + echo nodename=skurut14.grid.cesnet.cz
[2025-10-18 02:48:32] + echo Processors=2
[2025-10-18 02:48:32] + echo Nodecount=1
[2025-10-18 02:48:32] + echo Benchmark=HEPSPEC:1.0
[2025-10-18 02:48:32] + executable=./runpilot2-wrapper.sh
[2025-10-18 02:48:32] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-10-18 02:48:32] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-10-18 02:48:32] ++ head -n 1
[2025-10-18 02:48:32] ++ tr -d '\0'
[2025-10-18 02:48:32] + line1='#!/bin/bash'
[2025-10-18 02:48:32] ++ echo '#!/bin/bash'
[2025-10-18 02:48:32] ++ sed -n 's/^#! *//p'
[2025-10-18 02:48:32] + shebang=/bin/bash
[2025-10-18 02:48:32] ++ echo /bin/bash
[2025-10-18 02:48:32] ++ awk '{print $1}'
[2025-10-18 02:48:32] + interpreter=/bin/bash
[2025-10-18 02:48:32] + '[' /bin/bash = /usr/bin/env ']'
[2025-10-18 02:48:32] + '[' x/bin/bash = x ']'
[2025-10-18 02:48:32] + type /bin/bash
[2025-10-18 02:48:32] + '[' xgnutime = xgnutime ']'
[2025-10-18 02:48:32] + /usr/bin/time -o /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.0.29 -z -t --piloturl local --mute --container
[2025-10-18 02:48:32] + RESULT=2
[2025-10-18 02:48:32] + sed -i -e /nodename=/d /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-18 02:48:32] ++ grep domain_name init_data.xml
[2025-10-18 02:48:32] ++ awk -F '>' '{print $2}'
[2025-10-18 02:48:32] ++ awk -F '<' '{print $1}'
[2025-10-18 02:48:32] ++ sed -e 's# #_#g'
[2025-10-18 02:48:32] + hostname=skurut14.grid.cesnet.cz
[2025-10-18 02:48:32] ++ grep user_name init_data.xml
[2025-10-18 02:48:32] ++ awk -F '>' '{print $2}'
[2025-10-18 02:48:32] ++ awk -F '<' '{print $1}'
[2025-10-18 02:48:32] ++ sed -e 's# #_#g'
[2025-10-18 02:48:32] + username=praguelcg2
[2025-10-18 02:48:32] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2025-10-18 02:48:32] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2025-10-18 02:48:32] + '[' -n 4 ']'
[2025-10-18 02:48:32] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-18 02:48:32] + echo exitcode=2
[2025-10-18 02:48:32] + runtimeenvironments=
[2025-10-18 02:48:32] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-18 02:48:32] + RTE_function_0 2
[2025-10-18 02:48:32] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-18 02:48:32] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-18 02:48:32] + export BOINC_APP=ATLAS
[2025-10-18 02:48:32] + BOINC_APP=ATLAS
[2025-10-18 02:48:32] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-18 02:48:32] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-18 02:48:32] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-18 02:48:32] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-18 02:48:32] + '[' -z 2 ']'
[2025-10-18 02:48:32] + '[' 2 == 1 ']'
[2025-10-18 02:48:32] + '[' 0 -ne 0 ']'
[2025-10-18 02:48:32] + echo 'zip all output files'
[2025-10-18 02:48:32] + flist='*.diag '
[2025-10-18 02:48:32] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-18 02:48:32] + '[' -e ./heartbeat.json ']'
[2025-10-18 02:48:32] + flist='*.diag ./heartbeat.json'
[2025-10-18 02:48:32] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-18 02:48:32] + '[' -e ./output.list ']'
[2025-10-18 02:48:32] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-18 02:48:32] + '[' -e ./log.46676269._030685.job.log.1 ']'
[2025-10-18 02:48:32] + flist='*.diag ./heartbeat.json ./log.46676269._030685.job.log.1'
[2025-10-18 02:48:32] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-18 02:48:32] + '[' -e ./log.46676269._030685.job.log.1 ']'
[2025-10-18 02:48:32] + flist='*.diag ./heartbeat.json ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1'
[2025-10-18 02:48:32] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-18 02:48:32] + '[' -e ./gmlog/ ']'
[2025-10-18 02:48:32] + '[' -f output.list ']'
[2025-10-18 02:48:32] + tar cvf result.tar.gz PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag ./heartbeat.json ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1
[2025-10-18 02:48:32] + '[' xgnutime = xcgroup ']'
[2025-10-18 02:48:32] + '[' -n '' ']'
[2025-10-18 02:48:32] + '[' -n '' ']'
[2025-10-18 02:48:32] ++ date +%s
[2025-10-18 02:48:32] + ACCOUNTING_ENDTIME=1760748291
[2025-10-18 02:48:32] ++ date -d '1970-01-01 UTC 1760748099 seconds' +%Y%m%d%H%M%SZ
[2025-10-18 02:48:32] + echo LRMSStartTime=20251018024139Z
[2025-10-18 02:48:32] ++ date -d '1970-01-01 UTC 1760748291 seconds' +%Y%m%d%H%M%SZ
[2025-10-18 02:48:32] + echo LRMSEndTime=20251018024451Z
[2025-10-18 02:48:32] + echo walltime=192
[2025-10-18 02:48:32] + echo exitcode=2
[2025-10-18 02:48:32] + exit 2
[2025-10-18 02:48:32] ./pilotlog.txt
[2025-10-18 02:48:32] ./runtime_log.err
[2025-10-18 02:48:32] ./PanDA_Pilot-6837397605/prmon.log
[2025-10-18 02:48:32] ./PanDA_Pilot-6837397605/pilotlog.txt
[2025-10-18 02:48:32] ./PanDA_Pilot-6837397605/PoolFileCatalog.xml
[2025-10-18 02:48:32] ./PanDA_Pilot-6837397605/log.EVNTtoHITS
[2025-10-18 02:48:32] ./runtime_log
[2025-10-18 02:48:32] ./log.46676269._030685.job.log.1
[2025-10-18 02:48:32] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-10-18 02:48:32] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-10-18 02:48:32] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-10-18 02:48:32] ./pilot3/pilot/util/loggingsupport.py
[2025-10-18 02:48:32] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-10-18 02:48:32] ./pilot3/pilot/util/realtimelogger.py
04:49:25 (3044552): wrapper (7.7.26015): starting
04:49:25 (3044552): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 04:49:25] Arguments: --nthreads 4
[2025-10-19 04:49:25] Threads: 4
[2025-10-19 04:49:25] This job has been restarted, cleaning up previous attempt
[2025-10-19 04:49:25] Checking for CVMFS
[2025-10-19 04:49:25] No cvmfs_config command found, will try listing directly
[2025-10-19 04:49:25] CVMFS is ok
[2025-10-19 04:49:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 04:49:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 04:49:25] Further information can be found at the LHC@home message board.
[2025-10-19 04:49:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 04:49:25] Checking for apptainer binary...
[2025-10-19 04:49:25] which: no apptainer in ((null))
[2025-10-19 04:49:25] apptainer is not installed, using version from CVMFS
[2025-10-19 04:49:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 04:49:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-19 04:49:26] apptainer works
[2025-10-19 04:49:26] Set ATHENA_PROC_NUMBER=4
[2025-10-19 04:49:26] Set ATHENA_CORE_NUMBER=4
[2025-10-19 04:49:26] Starting ATLAS job with PandaID=6837397605
[2025-10-19 04:49:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 04:52:38] Job failed
[2025-10-19 04:52:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-10-19 04:52:38] ++ pwd
[2025-10-19 04:52:38] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/0/
[2025-10-19 04:52:38] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/0/
[2025-10-19 04:52:38] + mv ATLAS.root_0 EVNT.46676267._001251.pool.root.1
[2025-10-19 04:52:38] mv: 'ATLAS.root_0' and 'EVNT.46676267._001251.pool.root.1' are the same file
[2025-10-19 04:52:38] + tar --strip-components=5 -xvf input.tar.gz
[2025-10-19 04:52:38] + umask 077
[2025-10-19 04:52:38] ++ date +%s
[2025-10-19 04:52:38] + ACCOUNTING_STARTTIME=1760842166
[2025-10-19 04:52:38] + echo 'Detecting resource accounting method available for the job.'
[2025-10-19 04:52:38] Detecting resource accounting method available for the job.
[2025-10-19 04:52:38] + JOB_ACCOUNTING=
[2025-10-19 04:52:38] + command -v arc-job-cgroup
[2025-10-19 04:52:38] + '[' -z '' ']'
[2025-10-19 04:52:38] + GNU_TIME=/usr/bin/time
[2025-10-19 04:52:38] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-10-19 04:52:38] Looking for /usr/bin/time tool for accounting measurements
[2025-10-19 04:52:38] + '[' '!' -z /usr/bin/time ']'
[2025-10-19 04:52:38] + /usr/bin/time --version
[2025-10-19 04:52:38] + echo 'GNU time found and will be used for job accounting.'
[2025-10-19 04:52:38] GNU time found and will be used for job accounting.
[2025-10-19 04:52:38] + JOB_ACCOUNTING=gnutime
[2025-10-19 04:52:38] + '[' -z gnutime ']'
[2025-10-19 04:52:38] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-19 04:52:38] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-19 04:52:38] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-10/BOINC_MCORE/6837397605.out
[2025-10-19 04:52:38] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-10/BOINC_MCORE/6837397605.out
[2025-10-19 04:52:38] + export PILOT_NOKILL=YES
[2025-10-19 04:52:38] + PILOT_NOKILL=YES
[2025-10-19 04:52:38] + export GRID_GLOBAL_JOBID=PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-19 04:52:38] + GRID_GLOBAL_JOBID=PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-19 04:52:38] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-19 04:52:38] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-19 04:52:38] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-19 04:52:38] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-19 04:52:38] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-10-19 04:52:38] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-10-19 04:52:38] ++ pwd
[2025-10-19 04:52:38] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot56/slots/0
[2025-10-19 04:52:38] + RUNTIME_JOB_STDIN=/dev/null
[2025-10-19 04:52:38] ++ pwd
[2025-10-19 04:52:38] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot56/slots/0/log.46676269._030685.job.log.1
[2025-10-19 04:52:38] ++ pwd
[2025-10-19 04:52:38] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot56/slots/0/log.46676269._030685.job.log.1
[2025-10-19 04:52:38] ++ pwd
[2025-10-19 04:52:38] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/0.diag
[2025-10-19 04:52:38] + '[' '!' -z '' ']'
[2025-10-19 04:52:38] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-10-19 04:52:38] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-10-19 04:52:38] + RUNTIME_FRONTEND_SEES_NODE=
[2025-10-19 04:52:38] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-10-19 04:52:38] + '[' '!' -z '' ']'
[2025-10-19 04:52:38] + '[' -z yes ']'
[2025-10-19 04:52:38] ++ pwd
[2025-10-19 04:52:38] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-19 04:52:38] + runtimeenvironments=
[2025-10-19 04:52:38] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-19 04:52:38] + RTE_function_0 1
[2025-10-19 04:52:38] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-19 04:52:38] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-19 04:52:38] + export BOINC_APP=ATLAS
[2025-10-19 04:52:38] + BOINC_APP=ATLAS
[2025-10-19 04:52:38] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-19 04:52:38] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-19 04:52:38] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-19 04:52:38] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-19 04:52:38] + '[' -z 1 ']'
[2025-10-19 04:52:38] + '[' 1 == 1 ']'
[2025-10-19 04:52:38] + shift
[2025-10-19 04:52:38] + export SITE_NAME=BOINC
[2025-10-19 04:52:38] + SITE_NAME=BOINC
[2025-10-19 04:52:38] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/0/
[2025-10-19 04:52:38] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/0/
[2025-10-19 04:52:38] + '[' 0 -ne 0 ']'
[2025-10-19 04:52:38] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-10-19 04:52:38] + '[' -f /etc/os-release ']'
[2025-10-19 04:52:38] +++ cat /etc/os-release
[2025-10-19 04:52:38] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-10-19 04:52:38] +++ NAME='CentOS Linux'
[2025-10-19 04:52:38] +++ VERSION='7 (Core)'
[2025-10-19 04:52:38] +++ ID=centos
[2025-10-19 04:52:38] +++ ID_LIKE='rhel fedora'
[2025-10-19 04:52:38] +++ VERSION_ID=7
[2025-10-19 04:52:38] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-10-19 04:52:38] +++ ANSI_COLOR='0;31'
[2025-10-19 04:52:38] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-10-19 04:52:38] +++ HOME_URL=https://www.centos.org/
[2025-10-19 04:52:38] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-10-19 04:52:38] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-10-19 04:52:38] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-10-19 04:52:38] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-10-19 04:52:38] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-10-19 04:52:38] ++ echo 'CentOS Linux 7 (Core)'
[2025-10-19 04:52:38] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-10-19 04:52:38] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-10-19 04:52:38] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-10-19 04:52:38] + HOME=/scratch/boinc/var/slot56/slots/0
[2025-10-19 04:52:38] + export HOME
[2025-10-19 04:52:38] + cd /scratch/boinc/var/slot56/slots/0
[2025-10-19 04:52:38] + '[' '!' -z '' ']'
[2025-10-19 04:52:38] + '[' -z '' ']'
[2025-10-19 04:52:38] ++ /bin/hostname -f
[2025-10-19 04:52:38] + nodename=skurut14.grid.cesnet.cz
[2025-10-19 04:52:38] + echo nodename=skurut14.grid.cesnet.cz
[2025-10-19 04:52:38] + echo Processors=2
[2025-10-19 04:52:38] + echo Nodecount=1
[2025-10-19 04:52:38] + echo Benchmark=HEPSPEC:1.0
[2025-10-19 04:52:38] + executable=./runpilot2-wrapper.sh
[2025-10-19 04:52:38] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-10-19 04:52:38] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-10-19 04:52:38] ++ head -n 1
[2025-10-19 04:52:38] ++ tr -d '\0'
[2025-10-19 04:52:38] + line1='#!/bin/bash'
[2025-10-19 04:52:38] ++ echo '#!/bin/bash'
[2025-10-19 04:52:38] ++ sed -n 's/^#! *//p'
[2025-10-19 04:52:38] + shebang=/bin/bash
[2025-10-19 04:52:38] ++ echo /bin/bash
[2025-10-19 04:52:38] ++ awk '{print $1}'
[2025-10-19 04:52:38] + interpreter=/bin/bash
[2025-10-19 04:52:38] + '[' /bin/bash = /usr/bin/env ']'
[2025-10-19 04:52:38] + '[' x/bin/bash = x ']'
[2025-10-19 04:52:38] + type /bin/bash
[2025-10-19 04:52:38] + '[' xgnutime = xgnutime ']'
[2025-10-19 04:52:38] + /usr/bin/time -o /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.0.29 -z -t --piloturl local --mute --container
[2025-10-19 04:52:38] + RESULT=2
[2025-10-19 04:52:38] + sed -i -e /nodename=/d /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-19 04:52:38] ++ grep domain_name init_data.xml
[2025-10-19 04:52:38] ++ awk -F '>' '{print $2}'
[2025-10-19 04:52:38] ++ awk -F '<' '{print $1}'
[2025-10-19 04:52:38] ++ sed -e 's# #_#g'
[2025-10-19 04:52:38] + hostname=skurut14.grid.cesnet.cz
[2025-10-19 04:52:38] ++ grep user_name init_data.xml
[2025-10-19 04:52:38] ++ awk -F '>' '{print $2}'
[2025-10-19 04:52:38] ++ awk -F '<' '{print $1}'
[2025-10-19 04:52:38] ++ sed -e 's# #_#g'
[2025-10-19 04:52:38] + username=praguelcg2
[2025-10-19 04:52:38] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2025-10-19 04:52:38] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2025-10-19 04:52:38] + '[' -n 4 ']'
[2025-10-19 04:52:38] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-19 04:52:38] + echo exitcode=2
[2025-10-19 04:52:38] + runtimeenvironments=
[2025-10-19 04:52:38] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-19 04:52:38] + RTE_function_0 2
[2025-10-19 04:52:38] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-19 04:52:38] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-19 04:52:38] + export BOINC_APP=ATLAS
[2025-10-19 04:52:38] + BOINC_APP=ATLAS
[2025-10-19 04:52:38] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-19 04:52:38] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-19 04:52:38] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-19 04:52:38] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-19 04:52:38] + '[' -z 2 ']'
[2025-10-19 04:52:38] + '[' 2 == 1 ']'
[2025-10-19 04:52:38] + '[' 0 -ne 0 ']'
[2025-10-19 04:52:38] + echo 'zip all output files'
[2025-10-19 04:52:38] + flist='*.diag '
[2025-10-19 04:52:38] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-19 04:52:38] + '[' -e ./heartbeat.json ']'
[2025-10-19 04:52:38] + flist='*.diag ./heartbeat.json'
[2025-10-19 04:52:38] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-19 04:52:38] + '[' -e ./output.list ']'
[2025-10-19 04:52:38] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-19 04:52:38] + '[' -e ./log.46676269._030685.job.log.1 ']'
[2025-10-19 04:52:38] + flist='*.diag ./heartbeat.json ./log.46676269._030685.job.log.1'
[2025-10-19 04:52:38] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-19 04:52:38] + '[' -e ./log.46676269._030685.job.log.1 ']'
[2025-10-19 04:52:38] + flist='*.diag ./heartbeat.json ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1'
[2025-10-19 04:52:38] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-19 04:52:38] + '[' -e ./gmlog/ ']'
[2025-10-19 04:52:38] + '[' -f output.list ']'
[2025-10-19 04:52:38] + tar cvf result.tar.gz PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag ./heartbeat.json ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1
[2025-10-19 04:52:38] + '[' xgnutime = xcgroup ']'
[2025-10-19 04:52:38] + '[' -n '' ']'
[2025-10-19 04:52:38] + '[' -n '' ']'
[2025-10-19 04:52:38] ++ date +%s
[2025-10-19 04:52:38] + ACCOUNTING_ENDTIME=1760842358
[2025-10-19 04:52:38] ++ date -d '1970-01-01 UTC 1760842166 seconds' +%Y%m%d%H%M%SZ
[2025-10-19 04:52:38] + echo LRMSStartTime=20251019044926Z
[2025-10-19 04:52:38] ++ date -d '1970-01-01 UTC 1760842358 seconds' +%Y%m%d%H%M%SZ
[2025-10-19 04:52:38] + echo LRMSEndTime=20251019045238Z
[2025-10-19 04:52:38] + echo walltime=192
[2025-10-19 04:52:38] + echo exitcode=2
[2025-10-19 04:52:38] + exit 2
[2025-10-19 04:52:38] ./pilotlog.txt
[2025-10-19 04:52:38] ./runtime_log.err
[2025-10-19 04:52:38] ./PanDA_Pilot-6837397605/prmon.log
[2025-10-19 04:52:38] ./PanDA_Pilot-6837397605/pilotlog.txt
[2025-10-19 04:52:38] ./PanDA_Pilot-6837397605/PoolFileCatalog.xml
[2025-10-19 04:52:38] ./PanDA_Pilot-6837397605/log.EVNTtoHITS
[2025-10-19 04:52:38] ./runtime_log
[2025-10-19 04:52:38] ./log.46676269._030685.job.log.1
[2025-10-19 04:52:38] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-10-19 04:52:38] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-10-19 04:52:38] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-10-19 04:52:38] ./pilot3/pilot/util/loggingsupport.py
[2025-10-19 04:52:38] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-10-19 04:52:38] ./pilot3/pilot/util/realtimelogger.py
21:17:05 (3475025): wrapper (7.7.26015): starting
21:17:05 (3475025): wrapper: running run_atlas (--nthreads 4)
[2025-10-20 21:17:05] Arguments: --nthreads 4
[2025-10-20 21:17:05] Threads: 4
[2025-10-20 21:17:05] This job has been restarted, cleaning up previous attempt
[2025-10-20 21:17:05] Checking for CVMFS
[2025-10-20 21:17:05] No cvmfs_config command found, will try listing directly
[2025-10-20 21:17:05] CVMFS is ok
[2025-10-20 21:17:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 21:17:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 21:17:05] Further information can be found at the LHC@home message board.
[2025-10-20 21:17:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 21:17:05] Checking for apptainer binary...
[2025-10-20 21:17:05] which: no apptainer in ((null))
[2025-10-20 21:17:05] apptainer is not installed, using version from CVMFS
[2025-10-20 21:17:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 21:17:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-20 21:17:05] apptainer works
[2025-10-20 21:17:05] Set ATHENA_PROC_NUMBER=4
[2025-10-20 21:17:05] Set ATHENA_CORE_NUMBER=4
[2025-10-20 21:17:05] Starting ATLAS job with PandaID=6837397605
[2025-10-20 21:17:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 21:20:16] Job failed
[2025-10-20 21:20:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-10-20 21:20:16] ++ pwd
[2025-10-20 21:20:16] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/0/
[2025-10-20 21:20:16] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/0/
[2025-10-20 21:20:16] + mv ATLAS.root_0 EVNT.46676267._001251.pool.root.1
[2025-10-20 21:20:16] mv: 'ATLAS.root_0' and 'EVNT.46676267._001251.pool.root.1' are the same file
[2025-10-20 21:20:16] + tar --strip-components=5 -xvf input.tar.gz
[2025-10-20 21:20:16] + umask 077
[2025-10-20 21:20:16] ++ date +%s
[2025-10-20 21:20:16] + ACCOUNTING_STARTTIME=1760987826
[2025-10-20 21:20:16] + echo 'Detecting resource accounting method available for the job.'
[2025-10-20 21:20:16] Detecting resource accounting method available for the job.
[2025-10-20 21:20:16] + JOB_ACCOUNTING=
[2025-10-20 21:20:16] + command -v arc-job-cgroup
[2025-10-20 21:20:16] + '[' -z '' ']'
[2025-10-20 21:20:16] + GNU_TIME=/usr/bin/time
[2025-10-20 21:20:16] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-10-20 21:20:16] Looking for /usr/bin/time tool for accounting measurements
[2025-10-20 21:20:16] + '[' '!' -z /usr/bin/time ']'
[2025-10-20 21:20:16] + /usr/bin/time --version
[2025-10-20 21:20:16] + echo 'GNU time found and will be used for job accounting.'
[2025-10-20 21:20:16] GNU time found and will be used for job accounting.
[2025-10-20 21:20:16] + JOB_ACCOUNTING=gnutime
[2025-10-20 21:20:16] + '[' -z gnutime ']'
[2025-10-20 21:20:16] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-20 21:20:16] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-20 21:20:16] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-10/BOINC_MCORE/6837397605.out
[2025-10-20 21:20:16] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-10/BOINC_MCORE/6837397605.out
[2025-10-20 21:20:16] + export PILOT_NOKILL=YES
[2025-10-20 21:20:16] + PILOT_NOKILL=YES
[2025-10-20 21:20:16] + export GRID_GLOBAL_JOBID=PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-20 21:20:16] + GRID_GLOBAL_JOBID=PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-20 21:20:16] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-20 21:20:16] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm
[2025-10-20 21:20:16] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-20 21:20:16] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-20 21:20:16] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-10-20 21:20:16] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-10-20 21:20:16] ++ pwd
[2025-10-20 21:20:16] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot56/slots/0
[2025-10-20 21:20:16] + RUNTIME_JOB_STDIN=/dev/null
[2025-10-20 21:20:16] ++ pwd
[2025-10-20 21:20:16] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot56/slots/0/log.46676269._030685.job.log.1
[2025-10-20 21:20:16] ++ pwd
[2025-10-20 21:20:16] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot56/slots/0/log.46676269._030685.job.log.1
[2025-10-20 21:20:16] ++ pwd
[2025-10-20 21:20:16] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/0.diag
[2025-10-20 21:20:16] + '[' '!' -z '' ']'
[2025-10-20 21:20:16] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-10-20 21:20:16] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-10-20 21:20:16] + RUNTIME_FRONTEND_SEES_NODE=
[2025-10-20 21:20:16] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-10-20 21:20:16] + '[' '!' -z '' ']'
[2025-10-20 21:20:16] + '[' -z yes ']'
[2025-10-20 21:20:16] ++ pwd
[2025-10-20 21:20:16] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-20 21:20:16] + runtimeenvironments=
[2025-10-20 21:20:16] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-20 21:20:16] + RTE_function_0 1
[2025-10-20 21:20:16] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-20 21:20:16] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-20 21:20:16] + export BOINC_APP=ATLAS
[2025-10-20 21:20:16] + BOINC_APP=ATLAS
[2025-10-20 21:20:16] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-20 21:20:16] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-20 21:20:16] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-20 21:20:16] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-20 21:20:16] + '[' -z 1 ']'
[2025-10-20 21:20:16] + '[' 1 == 1 ']'
[2025-10-20 21:20:16] + shift
[2025-10-20 21:20:16] + export SITE_NAME=BOINC
[2025-10-20 21:20:16] + SITE_NAME=BOINC
[2025-10-20 21:20:16] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/0/
[2025-10-20 21:20:16] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/0/
[2025-10-20 21:20:16] + '[' 0 -ne 0 ']'
[2025-10-20 21:20:16] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-10-20 21:20:16] + '[' -f /etc/os-release ']'
[2025-10-20 21:20:16] +++ cat /etc/os-release
[2025-10-20 21:20:16] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-10-20 21:20:16] +++ NAME='CentOS Linux'
[2025-10-20 21:20:16] +++ VERSION='7 (Core)'
[2025-10-20 21:20:16] +++ ID=centos
[2025-10-20 21:20:16] +++ ID_LIKE='rhel fedora'
[2025-10-20 21:20:16] +++ VERSION_ID=7
[2025-10-20 21:20:16] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-10-20 21:20:16] +++ ANSI_COLOR='0;31'
[2025-10-20 21:20:16] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-10-20 21:20:16] +++ HOME_URL=https://www.centos.org/
[2025-10-20 21:20:16] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-10-20 21:20:16] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-10-20 21:20:16] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-10-20 21:20:16] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-10-20 21:20:16] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-10-20 21:20:16] ++ echo 'CentOS Linux 7 (Core)'
[2025-10-20 21:20:16] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-10-20 21:20:16] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-10-20 21:20:16] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-10-20 21:20:16] + HOME=/scratch/boinc/var/slot56/slots/0
[2025-10-20 21:20:16] + export HOME
[2025-10-20 21:20:16] + cd /scratch/boinc/var/slot56/slots/0
[2025-10-20 21:20:16] + '[' '!' -z '' ']'
[2025-10-20 21:20:16] + '[' -z '' ']'
[2025-10-20 21:20:16] ++ /bin/hostname -f
[2025-10-20 21:20:16] + nodename=skurut14.grid.cesnet.cz
[2025-10-20 21:20:16] + echo nodename=skurut14.grid.cesnet.cz
[2025-10-20 21:20:16] + echo Processors=2
[2025-10-20 21:20:16] + echo Nodecount=1
[2025-10-20 21:20:16] + echo Benchmark=HEPSPEC:1.0
[2025-10-20 21:20:16] + executable=./runpilot2-wrapper.sh
[2025-10-20 21:20:16] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-10-20 21:20:16] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-10-20 21:20:16] ++ head -n 1
[2025-10-20 21:20:16] ++ tr -d '\0'
[2025-10-20 21:20:16] + line1='#!/bin/bash'
[2025-10-20 21:20:16] ++ echo '#!/bin/bash'
[2025-10-20 21:20:16] ++ sed -n 's/^#! *//p'
[2025-10-20 21:20:16] + shebang=/bin/bash
[2025-10-20 21:20:16] ++ echo /bin/bash
[2025-10-20 21:20:16] ++ awk '{print $1}'
[2025-10-20 21:20:16] + interpreter=/bin/bash
[2025-10-20 21:20:16] + '[' /bin/bash = /usr/bin/env ']'
[2025-10-20 21:20:16] + '[' x/bin/bash = x ']'
[2025-10-20 21:20:16] + type /bin/bash
[2025-10-20 21:20:16] + '[' xgnutime = xgnutime ']'
[2025-10-20 21:20:16] + /usr/bin/time -o /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.0.29 -z -t --piloturl local --mute --container
[2025-10-20 21:20:16] + RESULT=2
[2025-10-20 21:20:16] + sed -i -e /nodename=/d /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-20 21:20:16] ++ grep domain_name init_data.xml
[2025-10-20 21:20:16] ++ awk -F '>' '{print $2}'
[2025-10-20 21:20:16] ++ awk -F '<' '{print $1}'
[2025-10-20 21:20:16] ++ sed -e 's# #_#g'
[2025-10-20 21:20:16] + hostname=skurut14.grid.cesnet.cz
[2025-10-20 21:20:16] ++ grep user_name init_data.xml
[2025-10-20 21:20:16] ++ awk -F '>' '{print $2}'
[2025-10-20 21:20:16] ++ awk -F '<' '{print $1}'
[2025-10-20 21:20:16] ++ sed -e 's# #_#g'
[2025-10-20 21:20:16] + username=praguelcg2
[2025-10-20 21:20:16] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2025-10-20 21:20:16] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2025-10-20 21:20:16] + '[' -n 4 ']'
[2025-10-20 21:20:16] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot56/slots/0/PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag
[2025-10-20 21:20:16] + echo exitcode=2
[2025-10-20 21:20:16] + runtimeenvironments=
[2025-10-20 21:20:16] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-20 21:20:16] + RTE_function_0 2
[2025-10-20 21:20:16] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-20 21:20:16] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-20 21:20:16] + export BOINC_APP=ATLAS
[2025-10-20 21:20:16] + BOINC_APP=ATLAS
[2025-10-20 21:20:16] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-20 21:20:16] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-20 21:20:16] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-20 21:20:16] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-20 21:20:16] + '[' -z 2 ']'
[2025-10-20 21:20:16] + '[' 2 == 1 ']'
[2025-10-20 21:20:16] + '[' 0 -ne 0 ']'
[2025-10-20 21:20:16] + echo 'zip all output files'
[2025-10-20 21:20:16] + flist='*.diag '
[2025-10-20 21:20:16] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-20 21:20:16] + '[' -e ./heartbeat.json ']'
[2025-10-20 21:20:16] + flist='*.diag ./heartbeat.json'
[2025-10-20 21:20:16] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-20 21:20:16] + '[' -e ./output.list ']'
[2025-10-20 21:20:16] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-20 21:20:16] + '[' -e ./log.46676269._030685.job.log.1 ']'
[2025-10-20 21:20:16] + flist='*.diag ./heartbeat.json ./log.46676269._030685.job.log.1'
[2025-10-20 21:20:16] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-20 21:20:16] + '[' -e ./log.46676269._030685.job.log.1 ']'
[2025-10-20 21:20:16] + flist='*.diag ./heartbeat.json ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1'
[2025-10-20 21:20:16] + for f in ./heartbeat.json ./output.list ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1 ./gmlog/
[2025-10-20 21:20:16] + '[' -e ./gmlog/ ']'
[2025-10-20 21:20:16] + '[' -f output.list ']'
[2025-10-20 21:20:16] + tar cvf result.tar.gz PgqLDmYCIR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAPMDmXwmJgm.diag ./heartbeat.json ./log.46676269._030685.job.log.1 ./log.46676269._030685.job.log.1
[2025-10-20 21:20:16] + '[' xgnutime = xcgroup ']'
[2025-10-20 21:20:16] + '[' -n '' ']'
[2025-10-20 21:20:16] + '[' -n '' ']'
[2025-10-20 21:20:16] ++ date +%s
[2025-10-20 21:20:16] + ACCOUNTING_ENDTIME=1760988016
[2025-10-20 21:20:16] ++ date -d '1970-01-01 UTC 1760987826 seconds' +%Y%m%d%H%M%SZ
[2025-10-20 21:20:16] + echo LRMSStartTime=20251020211706Z
[2025-10-20 21:20:16] ++ date -d '1970-01-01 UTC 1760988016 seconds' +%Y%m%d%H%M%SZ
[2025-10-20 21:20:16] + echo LRMSEndTime=20251020212016Z
[2025-10-20 21:20:16] + echo walltime=190
[2025-10-20 21:20:16] + echo exitcode=2
[2025-10-20 21:20:16] + exit 2
[2025-10-20 21:20:16] ./pilotlog.txt
[2025-10-20 21:20:16] ./runtime_log.err
[2025-10-20 21:20:16] ./PanDA_Pilot-6837397605/prmon.log
[2025-10-20 21:20:16] ./PanDA_Pilot-6837397605/pilotlog.txt
[2025-10-20 21:20:16] ./PanDA_Pilot-6837397605/PoolFileCatalog.xml
[2025-10-20 21:20:16] ./PanDA_Pilot-6837397605/log.EVNTtoHITS
[2025-10-20 21:20:16] ./runtime_log
[2025-10-20 21:20:16] ./log.46676269._030685.job.log.1
[2025-10-20 21:20:16] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-10-20 21:20:16] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-10-20 21:20:16] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-10-20 21:20:16] ./pilot3/pilot/util/loggingsupport.py
[2025-10-20 21:20:16] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-10-20 21:20:16] ./pilot3/pilot/util/realtimelogger.py
21:30:52 (3475025): run_atlas exited; CPU time 19.736754
21:30:52 (3475025): app exit status: 0x1
21:30:52 (3475025): called boinc_finish(195)
</stderr_txt>
]]>
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