Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:36:53 (37131): wrapper (7.7.26015): starting
07:36:53 (37131): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 07:36:53] Arguments: --nthreads 8
[2025-10-10 07:36:53] Threads: 8
[2025-10-10 07:36:53] Checking for CVMFS
[2025-10-10 07:36:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 07:36:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 07:36:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 07:36:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 07:36:53] 2.11.2.0 13817 477627 275412 151543 1 188 18172566 18432000 2749 130560 8 201868589 99.502 263557617 24845 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-10 07:36:53] CVMFS is ok
[2025-10-10 07:36:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 07:36:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 07:36:53] Further information can be found at the LHC@home message board.
[2025-10-10 07:36:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 07:36:53] Checking for apptainer binary...
[2025-10-10 07:36:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 07:36:53] Running /usr/bin/apptainer --version
[2025-10-10 07:36:53] apptainer version 1.3.2-1.el7
[2025-10-10 07:36:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 07:36:54] c-9-29.aglt2.org
[2025-10-10 07:36:54] apptainer works
[2025-10-10 07:36:54] Set ATHENA_PROC_NUMBER=8
[2025-10-10 07:36:54] Set ATHENA_CORE_NUMBER=8
[2025-10-10 07:36:54] Starting ATLAS job with PandaID=6837399498
[2025-10-10 07:36:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 10:18:38]  *** The last 200 lines of the pilot log: ***
[2025-10-10 10:18:38] 2025-10-10 14:18:05,173 | INFO     | sum of deviations: 28382662977.000004
[2025-10-10 10:18:38] 2025-10-10 14:18:05,173 | INFO     | mean x: 1760101039.5
[2025-10-10 10:18:38] 2025-10-10 14:18:05,173 | INFO     | mean y: 2451806.5569620254
[2025-10-10 10:18:38] 2025-10-10 14:18:05,173 | INFO     | -- intersect: -40844387052.74412
[2025-10-10 10:18:38] 2025-10-10 14:18:05,173 | INFO     | intersect: -40844387052.74412
[2025-10-10 10:18:38] 2025-10-10 14:18:05,173 | INFO     | chi2: 1.4566054428276833
[2025-10-10 10:18:38] 2025-10-10 14:18:05,173 | INFO     | sum of square deviations: 1110539892.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,174 | INFO     | sum of deviations: 27369106314.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,174 | INFO     | mean x: 1760100887.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,174 | INFO     | mean y: 2450431.8300653594
[2025-10-10 10:18:38] 2025-10-10 14:18:05,174 | INFO     | -- intersect: -43374999263.30318
[2025-10-10 10:18:38] 2025-10-10 14:18:05,174 | INFO     | intersect: -43374999263.30318
[2025-10-10 10:18:38] 2025-10-10 14:18:05,175 | INFO     | chi2: 1.4572803387158797
[2025-10-10 10:18:38] 2025-10-10 14:18:05,175 | INFO     | current chi2=1.4572803387158797 (change=-0.04633347290575783 %)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,175 | INFO     | right removable region: 152
[2025-10-10 10:18:38] 2025-10-10 14:18:05,175 | INFO     | sum of square deviations: 1110539892.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,176 | INFO     | sum of deviations: 3493296516.000001
[2025-10-10 10:18:38] 2025-10-10 14:18:05,176 | INFO     | mean x: 1760101192.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,176 | INFO     | mean y: 2485128.5490196077
[2025-10-10 10:18:38] 2025-10-10 14:18:05,176 | INFO     | -- intersect: -5534061019.962544
[2025-10-10 10:18:38] 2025-10-10 14:18:05,176 | INFO     | intersect: -5534061019.962544
[2025-10-10 10:18:38] 2025-10-10 14:18:05,176 | INFO     | chi2: 0.014583332772348752
[2025-10-10 10:18:38] 2025-10-10 14:18:05,176 | INFO     | current chi2=0.014583332772348752 (change=98.99881379380002 %)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,177 | INFO     | sum of square deviations: 1005179777.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,177 | INFO     | sum of deviations: 1561372408.9999998
[2025-10-10 10:18:38] 2025-10-10 14:18:05,177 | INFO     | mean x: 1760101344.5
[2025-10-10 10:18:38] 2025-10-10 14:18:05,177 | INFO     | mean y: 2487877.054054054
[2025-10-10 10:18:38] 2025-10-10 14:18:05,177 | INFO     | -- intersect: -2731524226.2814703
[2025-10-10 10:18:38] 2025-10-10 14:18:05,178 | INFO     | intersect: -2731524226.2814703
[2025-10-10 10:18:38] 2025-10-10 14:18:05,178 | INFO     | chi2: 0.00025750867626813274
[2025-10-10 10:18:38] 2025-10-10 14:18:05,178 | INFO     | current chi2=0.00025750867626813274 (change=98.23422615195072 %)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,178 | INFO     | sum of square deviations: 906703512.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | sum of deviations: 1263452617.9999998
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | mean x: 1760101497.0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | mean y: 2488336.104895105
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | -- intersect: -2450137924.738758
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | intersect: -2450137924.738758
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | chi2: 0.00019591520711237693
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | current chi2=0.00019591520711237693 (change=23.91898791465231 %)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,179 | INFO     | left removable region: 30
[2025-10-10 10:18:38] 2025-10-10 14:18:05,180 | INFO     | sum of square deviations: 563026370.5
[2025-10-10 10:18:38] 2025-10-10 14:18:05,180 | INFO     | sum of deviations: 888092198.5000001
[2025-10-10 10:18:38] 2025-10-10 14:18:05,180 | INFO     | mean x: 1760101771.5
[2025-10-10 10:18:38] 2025-10-10 14:18:05,180 | INFO     | mean y: 2488526.2540983604
[2025-10-10 10:18:38] 2025-10-10 14:18:05,180 | INFO     | -- intersect: -2773815984.042689
[2025-10-10 10:18:38] 2025-10-10 14:18:05,180 | INFO     | intersect: -2773815984.042689
[2025-10-10 10:18:38] 2025-10-10 14:18:05,181 | INFO     | chi2: 0.0001709734198049175
[2025-10-10 10:18:38] 2025-10-10 14:18:05,181 | INFO     | -- intersect: -2773815984.042689
[2025-10-10 10:18:38] 2025-10-10 14:18:05,181 | INFO     | current memory leak: 1.58 B/s (using 122 data points, chi2=0.00)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,181 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,181 | INFO     | ..............................
[2025-10-10 10:18:38] 2025-10-10 14:18:05,181 | INFO     | . Timing measurements:
[2025-10-10 10:18:38] 2025-10-10 14:18:05,181 | INFO     | . get job = 0 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,182 | INFO     | . initial setup = 2 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,182 | INFO     | . payload setup = 4 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,182 | INFO     | . stage-in = 0 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,182 | INFO     | . payload execution = 9630 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,182 | INFO     | . stage-out = 0 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,182 | INFO     | . log creation = 0 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,182 | INFO     | ..............................
[2025-10-10 10:18:38] 2025-10-10 14:18:05,250 | INFO     | 
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | job summary report
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | --------------------------------------------------
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | PanDA job id: 6837399498
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | task id: 46676269
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | errors: (none)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | pilot state: finished 
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | transexitcode: 0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | exeerrorcode: 0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | exeerrordiag: 
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | exitcode: 0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,251 | INFO     | exitmsg: OK
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | cpuconsumptiontime: 72343 s
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | nevents: 400
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | neventsw: 0
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | pid: 48320
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | pgrp: 48320
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | corecount: 8
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | event service: False
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | sizes: {0: 2348630, 1: 2348885, 5: 2349147, 12: 2349203, 9639: 2377683, 9641: 2386865, 9645: 2387067}
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | --------------------------------------------------
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | 
[2025-10-10 10:18:38] 2025-10-10 14:18:05,252 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 10:18:38] 2025-10-10 14:18:05,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 10:18:38] 2025-10-10 14:18:05,269 | INFO     | job 6837399498 has completed (purged errors)
[2025-10-10 10:18:38] 2025-10-10 14:18:05,269 | INFO     | overall cleanup function is called
[2025-10-10 10:18:38] 2025-10-10 14:18:05,732 | INFO     | PID=40832 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 10:18:38] 2025-10-10 14:18:05,732 | INFO     | .. there are 4 such processes running
[2025-10-10 10:18:38] 2025-10-10 14:18:06,276 | INFO     | --- collectZombieJob: --- 10, [48320]
[2025-10-10 10:18:38] 2025-10-10 14:18:06,276 | INFO     | zombie collector waiting for pid 48320
[2025-10-10 10:18:38] 2025-10-10 14:18:06,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 10:18:38] 2025-10-10 14:18:06,277 | INFO     | collected zombie processes
[2025-10-10 10:18:38] 2025-10-10 14:18:06,277 | INFO     | will attempt to kill all subprocesses of pid=48320
[2025-10-10 10:18:38] 2025-10-10 14:18:06,507 | INFO     | process IDs to be killed: [48320] (in reverse order)
[2025-10-10 10:18:38] 2025-10-10 14:18:06,583 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 10:18:38] 2025-10-10 14:18:06,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 10:18:38] 2025-10-10 14:18:06,592 | INFO     | did not find any defunct processes belonging to 48320
[2025-10-10 10:18:38] 2025-10-10 14:18:06,599 | INFO     | did not find any defunct processes belonging to 48320
[2025-10-10 10:18:38] 2025-10-10 14:18:06,599 | INFO     | ready for new job
[2025-10-10 10:18:38] 2025-10-10 14:18:06,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 10:18:38] 2025-10-10 14:18:06,601 | INFO     | ***************************************
[2025-10-10 10:18:38] 2025-10-10 14:18:06,601 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 10:18:38] 2025-10-10 14:18:06,601 | INFO     | ***************************************
[2025-10-10 10:18:38] 2025-10-10 14:18:06,602 | INFO     | 
[2025-10-10 10:18:38] 2025-10-10 14:18:06,603 | INFO     | architecture information:
[2025-10-10 10:18:38] 2025-10-10 14:18:06,604 | INFO     | executing command: cat /etc/os-release
[2025-10-10 10:18:38] 2025-10-10 14:18:06,620 | INFO     | cat /etc/os-release:
[2025-10-10 10:18:38] NAME="CentOS Linux"
[2025-10-10 10:18:38] VERSION="7 (Core)"
[2025-10-10 10:18:38] ID="centos"
[2025-10-10 10:18:38] ID_LIKE="rhel fedora"
[2025-10-10 10:18:38] VERSION_ID="7"
[2025-10-10 10:18:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 10:18:38] ANSI_COLOR="0;31"
[2025-10-10 10:18:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 10:18:38] HOME_URL="https://www.centos.org/"
[2025-10-10 10:18:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 10:18:38] 
[2025-10-10 10:18:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 10:18:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 10:18:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 10:18:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 10:18:38] 
[2025-10-10 10:18:38] 2025-10-10 14:18:06,621 | INFO     | ***************************************
[2025-10-10 10:18:38] 2025-10-10 14:18:07,123 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 10:18:38] 2025-10-10 14:18:07,156 | INFO     | sufficient remaining disk space (104656273408 B)
[2025-10-10 10:18:38] 2025-10-10 14:18:07,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 10:18:38] 2025-10-10 14:18:07,156 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 10:18:38] 2025-10-10 14:18:07,157 | INFO     | update_server=False
[2025-10-10 10:18:38] 2025-10-10 14:18:07,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 10:18:38] 2025-10-10 14:18:07,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:18:38] 2025-10-10 14:18:07,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 10:18:38] 2025-10-10 14:18:07,578 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 10:18:38] 2025-10-10 14:18:07,578 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 10:18:38] 2025-10-10 14:18:07,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 10:18:38] 2025-10-10 14:18:07,579 | INFO     | will abort loop
[2025-10-10 10:18:38] 2025-10-10 14:18:07,619 | INFO     | all data control threads have been joined
[2025-10-10 10:18:38] 2025-10-10 14:18:07,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 10:18:38] 2025-10-10 14:18:08,162 | INFO     | [job] retrieve thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,163 | INFO     | [job] queue monitor thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,199 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,226 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,248 | INFO     | all payload control threads have been joined
[2025-10-10 10:18:38] 2025-10-10 14:18:08,298 | INFO     | [job] validate thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,352 | INFO     | [payload] validate_post thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,384 | INFO     | all job control threads have been joined
[2025-10-10 10:18:38] 2025-10-10 14:18:08,584 | INFO     | [job] job monitor thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,624 | INFO     | [data] control thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:08,807 | INFO     | [payload] failed_post thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:09,105 | INFO     | [data] copytool_in thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:09,164 | INFO     | [data] copytool_out thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:09,228 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:09,253 | INFO     | [payload] control thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:09,389 | INFO     | [job] control thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:11,811 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:17,947 | INFO     | job.realtimelogging is not enabled
[2025-10-10 10:18:38] 2025-10-10 14:18:18,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 10:18:38] 2025-10-10 14:18:21,054 | INFO     | [monitor] cgroup control has ended
[2025-10-10 10:18:38] 2025-10-10 14:18:23,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140130951411520)>', '<ExcThread(monitor, started 140130648041216)>']
[2025-10-10 10:18:38] 2025-10-10 14:18:28,137 | INFO     | all workflow threads have been joined
[2025-10-10 10:18:38] 2025-10-10 14:18:28,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 10:18:38] 2025-10-10 14:18:28,138 | INFO     | traces error code: 0
[2025-10-10 10:18:38] 2025-10-10 14:18:28,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 10:18:38] 2025-10-10 14:18:38,064 | INFO     | PID=40832 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 10:18:38] 2025-10-10 14:18:38,064 | INFO     | .. there are 4 such processes running
[2025-10-10 10:18:38] 2025-10-10 14:18:38,065 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 10:18:38] 2025-10-10 14:18:38,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 10:18:38] 2025-10-10 14:18:38,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 10:18:38] 2025-10-10 14:18:38,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 10:18:38] 2025-10-10 14:18:38,066 | INFO     | [monitor] control thread has ended
[2025-10-10 10:18:38] 2025-10-10 14:18:38,151 [wrapper] ==== pilot stdout END ====
[2025-10-10 10:18:38] 2025-10-10 14:18:38,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 10:18:38] 2025-10-10 14:18:38,155 [wrapper] pilotpid: 40832
[2025-10-10 10:18:38] 2025-10-10 14:18:38,157 [wrapper] Pilot exit status: 0
[2025-10-10 10:18:38] 2025-10-10 14:18:38,166 [wrapper] pandaids: 6837399498
[2025-10-10 10:18:38] 2025-10-10 14:18:38,205 [wrapper] cleanup supervisor_pilot  2282 40833
[2025-10-10 10:18:38] 2025-10-10 14:18:38,207 [wrapper] Test setup, not cleaning
[2025-10-10 10:18:38] 2025-10-10 14:18:38,210 [wrapper] apfmon messages muted
[2025-10-10 10:18:38] 2025-10-10 14:18:38,212 [wrapper] ==== wrapper stdout END ====
[2025-10-10 10:18:38] 2025-10-10 14:18:38,214 [wrapper] ==== wrapper stderr END ====
[2025-10-10 10:18:38]  *** Error codes and diagnostics ***
[2025-10-10 10:18:38]     "exeErrorCode": 0,
[2025-10-10 10:18:38]     "exeErrorDiag": "",
[2025-10-10 10:18:38]     "pilotErrorCode": 0,
[2025-10-10 10:18:38]     "pilotErrorDiag": "",
[2025-10-10 10:18:38]  *** Listing of results directory ***
[2025-10-10 10:18:38] total 407384
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 23:28 pilot3.tar.gz
[2025-10-10 10:18:38] -rwx------ 1 boincer umatlas     36292 Oct  9 23:33 runpilot2-wrapper.sh
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 23:33 queuedata.json
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas       100 Oct 10 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 10:18:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 07:36 run_atlas
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas       105 Oct 10 07:36 job.xml
[2025-10-10 10:18:38] -rw-r--r-- 2 boincer umatlas 219739633 Oct 10 07:36 EVNT.46676267._001282.pool.root.1
[2025-10-10 10:18:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 07:36 start_atlas.sh
[2025-10-10 10:18:38] drwxrwx--x 2 boincer umatlas      4096 Oct 10 07:36 shared
[2025-10-10 10:18:38] -rw-r--r-- 2 boincer umatlas    569678 Oct 10 07:36 input.tar.gz
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas         0 Oct 10 07:36 boinc_lockfile
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 07:36 pandaJob.out
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas    975528 Oct 10 07:37 agis_schedconf.cvmfs.json
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas   1560580 Oct 10 07:37 agis_ddmendpoints.agis.ALL.json
[2025-10-10 10:18:38] drwx------ 5 boincer umatlas      4096 Oct 10 07:37 pilot3
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas      6035 Oct 10 10:13 init_data.xml
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas 189997946 Oct 10 10:17 HITS.46676269._031464.pool.root.1
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas       529 Oct 10 10:17 boinc_task_state.xml
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas      1044 Oct 10 10:17 memory_monitor_summary.json
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas    411608 Oct 10 10:18 log.46676269._031464.job.log.tgz.1
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas      7828 Oct 10 10:18 heartbeat.json
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas        27 Oct 10 10:18 wrapper_checkpoint.txt
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 10:18 boinc_mmap_file
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas        95 Oct 10 10:18 pilot_heartbeat.json
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas       820 Oct 10 10:18 pilotlog.txt
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas   1350121 Oct 10 10:18 log.46676269._031464.job.log.1
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas       357 Oct 10 10:18 output.list
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas       620 Oct 10 10:18 runtime_log
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas   1781760 Oct 10 10:18 result.tar.gz
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas       657 Oct 10 10:18 YQaMDmr3IR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMBcNDmSIfuZm.diag
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas      8693 Oct 10 10:18 runtime_log.err
[2025-10-10 10:18:38] -rw-r--r-- 1 boincer umatlas     21049 Oct 10 10:18 stderr.txt
[2025-10-10 10:18:38] HITS file was successfully produced:
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas 189997946 Oct 10 10:17 shared/HITS.pool.root.1
[2025-10-10 10:18:38]  *** Contents of shared directory: ***
[2025-10-10 10:18:38] total 402460
[2025-10-10 10:18:38] -rw-r--r-- 2 boincer umatlas 219739633 Oct 10 07:36 ATLAS.root_0
[2025-10-10 10:18:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 07:36 start_atlas.sh
[2025-10-10 10:18:38] -rw-r--r-- 2 boincer umatlas    569678 Oct 10 07:36 input.tar.gz
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas 189997946 Oct 10 10:17 HITS.pool.root.1
[2025-10-10 10:18:38] -rw------- 1 boincer umatlas   1781760 Oct 10 10:18 result.tar.gz
10:18:39 (37131): run_atlas exited; CPU time 72548.464428
10:18:39 (37131): called boinc_finish(0)

</stderr_txt>
]]>

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