Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:56:46 (3867977): wrapper (7.7.26015): starting
00:56:46 (3867977): wrapper: running run_atlas (--nthreads 6)
[2025-10-11 00:56:46] Arguments: --nthreads 6
[2025-10-11 00:56:46] Threads: 6
[2025-10-11 00:56:46] Checking for CVMFS
[2025-10-11 00:56:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:56:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:56:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:56:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:56:50] 2.13.2.0 3868177 0 30820 151564 3 1 15960625 81920000 0 130560 0 0 0.000 1291 2264 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-10-11 00:56:50] CVMFS is ok
[2025-10-11 00:56:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:56:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:56:50] Further information can be found at the LHC@home message board.
[2025-10-11 00:56:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:56:50] Checking for apptainer binary...
[2025-10-11 00:56:50] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-10-11 00:56:50] apptainer is not installed, using version from CVMFS
[2025-10-11 00:56:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:56:50] monitor-atlas.iep
[2025-10-11 00:56:50] apptainer works
[2025-10-11 00:56:50] Set ATHENA_PROC_NUMBER=6
[2025-10-11 00:56:50] Set ATHENA_CORE_NUMBER=6
[2025-10-11 00:56:50] Starting ATLAS job with PandaID=6837397529
[2025-10-11 00:56:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 01:46:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 01:46:07]  protocol_id=None
[2025-10-11 01:46:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 01:46:07]  replicas=None
[2025-10-11 01:46:07]  scope=mc23_13p6TeV
[2025-10-11 01:46:07]  status=None
[2025-10-11 01:46:07]  status_code=0
[2025-10-11 01:46:07]  storage_token=
[2025-10-11 01:46:07]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6837397529/log.46676269._030609.job.log.tgz.1
[2025-10-11 01:46:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/4c/log.46676269._030609.job.log.tgz.1
[2025-10-11 01:46:07]  workdir=None
[2025-10-11 01:46:07] ]
[2025-10-11 01:46:07] 2025-10-10 23:45:28,583 | INFO     | transferring file log.46676269._030609.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6837397529/log.46676269._030609.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 01:46:07] 2025-10-10 23:45:28,583 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6837397529/log.46676269._030609.job.log.tgz.1 /var/lib/boinc/slots/6/log.46676269._030609.job
[2025-10-11 01:46:07] 2025-10-10 23:45:28,590 | INFO     | adding to output.list: log.46676269._030609.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/4c/log.46676269._030609.job.log.tg
[2025-10-11 01:46:07] 2025-10-10 23:45:28,590 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 01:46:07] 2025-10-10 23:45:28,590 | INFO     | summary of transferred files:
[2025-10-11 01:46:07] 2025-10-10 23:45:28,590 | INFO     |  -- lfn=log.46676269._030609.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 01:46:07] 2025-10-10 23:45:28,590 | INFO     | stage-out finished correctly
[2025-10-11 01:46:07] 2025-10-10 23:45:28,621 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 01:46:07] 2025-10-10 23:45:29,665 | INFO     | time since job start (2912s) is within the limit (172800.0s)
[2025-10-11 01:46:07] 2025-10-10 23:45:30,310 | INFO     | monitor loop #227: job 0:6837397529 is in state 'finished'
[2025-10-11 01:46:07] 2025-10-10 23:45:30,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:46:07] 2025-10-10 23:45:31,430 | INFO     | job 6837397529 has state=finished
[2025-10-11 01:46:07] 2025-10-10 23:45:31,430 | INFO     | preparing for final server update for job 6837397529 in state='finished'
[2025-10-11 01:46:07] 2025-10-10 23:45:31,430 | INFO     | this job has now completed (state=finished)
[2025-10-11 01:46:07] 2025-10-10 23:45:31,430 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 01:46:07] 2025-10-10 23:45:31,430 | INFO     | log transfer has been attempted: DONE
[2025-10-11 01:46:07] 2025-10-10 23:45:31,430 | INFO     | job 6837397529 has finished - writing final server update
[2025-10-11 01:46:07] 2025-10-10 23:45:31,430 | INFO     | total number of processed events: 400 (read)
[2025-10-11 01:46:07] 2025-10-10 23:45:31,431 | INFO     | executing command: lscpu
[2025-10-11 01:46:07] 2025-10-10 23:45:31,438 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 01:46:07] 2025-10-10 23:45:31,670 | INFO     | time since job start (2914s) is within the limit (172800.0s)
[2025-10-11 01:46:07] 2025-10-10 23:45:32,813 | INFO     | monitor loop #228: job 0:6837397529 is in state 'finished'
[2025-10-11 01:46:07] 2025-10-10 23:45:32,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:46:07] 2025-10-10 23:45:33,675 | INFO     | time since job start (2916s) is within the limit (172800.0s)
[2025-10-11 01:46:07] 2025-10-10 23:45:34,563 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 01:46:07] 2025-10-10 23:45:34,564 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4300.143833333333
[2025-10-11 01:46:07] 2025-10-10 23:45:34,564 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6837397529/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 01:46:07] 2025-10-10 23:45:34,565 | INFO     | extracted standard info from prmon json
[2025-10-11 01:46:07] 2025-10-10 23:45:34,565 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 01:46:07] 2025-10-10 23:45:34,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 01:46:07] 2025-10-10 23:45:34,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 01:46:07] 2025-10-10 23:45:34,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 01:46:07] 2025-10-10 23:45:34,565 | INFO     | fitting pss+swap vs Time
[2025-10-11 01:46:07] 2025-10-10 23:45:34,565 | INFO     | sum of square deviations: 21358540.0
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | sum of deviations: -4491758180.0
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | mean x: 1760138564.0
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | mean y: 2635562.2195121953
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | -- intersect: 370164490856.6569
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | intersect: 370164490856.6569
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | chi2: 0.06801713724358661
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | -- intersect: 370164490856.6569
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | current memory leak: -210.30 B/s (using 41 data points, chi2=0.07)
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | could have reported an average CPU frequency of 4299 MHz (5 samples)
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | ..............................
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . Timing measurements:
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . get job = 0 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . initial setup = 1 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . payload setup = 4 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . stage-in = 0 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . payload execution = 2887 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . stage-out = 0 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | . log creation = 0 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,566 | INFO     | ..............................
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | 
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | job summary report
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | --------------------------------------------------
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | PanDA job id: 6837397529
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | task id: 46676269
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | errors: (none)
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | pilot state: finished 
[2025-10-11 01:46:07] 2025-10-10 23:45:34,597 | INFO     | transexitcode: 0
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | exeerrorcode: 0
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | exeerrordiag: 
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | exitcode: 0
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | exitmsg: OK
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | cpuconsumptiontime: 16446 s
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | nevents: 400
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | neventsw: 0
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | pid: 3878741
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | pgrp: 3878741
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | corecount: 6
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | event service: False
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 2896: 2374573, 2897: 2383627, 2903: 2383797}
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | --------------------------------------------------
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | 
[2025-10-11 01:46:07] 2025-10-10 23:45:34,598 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-11 01:46:07] 2025-10-10 23:45:34,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | job 6837397529 has completed (purged errors)
[2025-10-11 01:46:07] 2025-10-10 23:45:34,607 | INFO     | overall cleanup function is called
[2025-10-11 01:46:07] 2025-10-10 23:45:34,721 | INFO     | PID=3872193 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 01:46:07] 2025-10-10 23:45:35,613 | INFO     | --- collectZombieJob: --- 10, [3878741]
[2025-10-11 01:46:07] 2025-10-10 23:45:35,613 | INFO     | zombie collector waiting for pid 3878741
[2025-10-11 01:46:07] 2025-10-10 23:45:35,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 01:46:07] 2025-10-10 23:45:35,613 | INFO     | collected zombie processes
[2025-10-11 01:46:07] 2025-10-10 23:45:35,613 | INFO     | will attempt to kill all subprocesses of pid=3878741
[2025-10-11 01:46:07] 2025-10-10 23:45:35,644 | INFO     | process IDs to be killed: [3878741] (in reverse order)
[2025-10-11 01:46:07] 2025-10-10 23:45:35,661 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 01:46:07] 2025-10-10 23:45:35,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 01:46:07] 2025-10-10 23:45:35,662 | INFO     | did not find any defunct processes belonging to 3878741
[2025-10-11 01:46:07] 2025-10-10 23:45:35,662 | INFO     | did not find any defunct processes belonging to 3878741
[2025-10-11 01:46:07] 2025-10-10 23:45:35,663 | INFO     | ready for new job
[2025-10-11 01:46:07] 2025-10-10 23:45:35,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 01:46:07] 2025-10-10 23:45:35,663 | INFO     | ***************************************
[2025-10-11 01:46:07] 2025-10-10 23:45:35,663 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 01:46:07] 2025-10-10 23:45:35,663 | INFO     | ***************************************
[2025-10-11 01:46:07] 2025-10-10 23:45:35,663 | INFO     | 
[2025-10-11 01:46:07] 2025-10-10 23:45:35,663 | INFO     | architecture information:
[2025-10-11 01:46:07] 2025-10-10 23:45:35,664 | INFO     | executing command: cat /etc/os-release
[2025-10-11 01:46:07] 2025-10-10 23:45:35,669 | INFO     | cat /etc/os-release:
[2025-10-11 01:46:07] NAME="CentOS Linux"
[2025-10-11 01:46:07] VERSION="7 (Core)"
[2025-10-11 01:46:07] ID="centos"
[2025-10-11 01:46:07] ID_LIKE="rhel fedora"
[2025-10-11 01:46:07] VERSION_ID="7"
[2025-10-11 01:46:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 01:46:07] ANSI_COLOR="0;31"
[2025-10-11 01:46:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 01:46:07] HOME_URL="https://www.centos.org/"
[2025-10-11 01:46:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 01:46:07] 
[2025-10-11 01:46:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 01:46:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 01:46:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 01:46:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 01:46:07] 
[2025-10-11 01:46:07] 2025-10-10 23:45:35,669 | INFO     | ***************************************
[2025-10-11 01:46:07] 2025-10-10 23:45:36,172 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-11 01:46:07] 2025-10-10 23:45:36,178 | INFO     | sufficient remaining disk space (871601537024 B)
[2025-10-11 01:46:07] 2025-10-10 23:45:36,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 01:46:07] 2025-10-10 23:45:36,178 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 01:46:07] 2025-10-10 23:45:36,178 | INFO     | update_server=False
[2025-10-11 01:46:07] 2025-10-10 23:45:36,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 01:46:07] 2025-10-10 23:45:36,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:46:07] 2025-10-10 23:45:36,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:46:07] 2025-10-10 23:45:36,321 | INFO     | aborting loop
[2025-10-11 01:46:07] 2025-10-10 23:45:36,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 01:46:07] 2025-10-10 23:45:36,763 | INFO     | all payload control threads have been joined
[2025-10-11 01:46:07] 2025-10-10 23:45:37,181 | INFO     | [job] queue monitor thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:37,183 | INFO     | [job] retrieve thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:37,245 | INFO     | all data control threads have been joined
[2025-10-11 01:46:07] 2025-10-10 23:45:37,254 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:37,327 | INFO     | [job] job monitor thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:37,693 | INFO     | all job control threads have been joined
[2025-10-11 01:46:07] 2025-10-10 23:45:37,768 | INFO     | [payload] control thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:37,779 | INFO     | [payload] validate_post thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,249 | INFO     | [data] control thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,541 | INFO     | [data] copytool_in thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,591 | INFO     | [job] validate thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,624 | INFO     | [payload] failed_post thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,634 | INFO     | [data] copytool_out thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,657 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,681 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:38,698 | INFO     | [job] control thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:39,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 01:46:07] 2025-10-10 23:45:43,163 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:45:47,157 | INFO     | job.realtimelogging is not enabled
[2025-10-11 01:46:07] 2025-10-10 23:45:48,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 01:46:07] 2025-10-10 23:46:01,679 | INFO     | [monitor] cgroup control has ended
[2025-10-11 01:46:07] 2025-10-10 23:46:01,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970866313024)>', '<ExcThread(monitor, started 139969955882752)>']
[2025-10-11 01:46:07] 2025-10-10 23:46:06,850 | INFO     | PID=3872193 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 01:46:07] 2025-10-10 23:46:06,850 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 01:46:07] 2025-10-10 23:46:06,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 01:46:07] 2025-10-10 23:46:06,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 01:46:07] 2025-10-10 23:46:06,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 01:46:07] 2025-10-10 23:46:06,850 | INFO     | [monitor] control thread has ended
[2025-10-11 01:46:07] 2025-10-10 23:46:07,022 | INFO     | all workflow threads have been joined
[2025-10-11 01:46:07] 2025-10-10 23:46:07,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 01:46:07] 2025-10-10 23:46:07,023 | INFO     | traces error code: 0
[2025-10-11 01:46:07] 2025-10-10 23:46:07,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 01:46:07] 2025-10-10 23:46:07,065 [wrapper] ==== pilot stdout END ====
[2025-10-11 01:46:07] 2025-10-10 23:46:07,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 01:46:07] 2025-10-10 23:46:07,067 [wrapper] pilotpid: 3872193
[2025-10-11 01:46:07] 2025-10-10 23:46:07,068 [wrapper] Pilot exit status: 0
[2025-10-11 01:46:07] 2025-10-10 23:46:07,072 [wrapper] pandaids: 6837397529
[2025-10-11 01:46:07] 2025-10-10 23:46:07,081 [wrapper] cleanup supervisor_pilot 3894979 3872194
[2025-10-11 01:46:07] 2025-10-10 23:46:07,082 [wrapper] Test setup, not cleaning
[2025-10-11 01:46:07] 2025-10-10 23:46:07,083 [wrapper] apfmon messages muted
[2025-10-11 01:46:07] 2025-10-10 23:46:07,084 [wrapper] ==== wrapper stdout END ====
[2025-10-11 01:46:07] 2025-10-10 23:46:07,085 [wrapper] ==== wrapper stderr END ====
[2025-10-11 01:46:07]  *** Error codes and diagnostics ***
[2025-10-11 01:46:07]     "exeErrorCode": 0,
[2025-10-11 01:46:07]     "exeErrorDiag": "",
[2025-10-11 01:46:07]     "pilotErrorCode": 0,
[2025-10-11 01:46:07]     "pilotErrorDiag": "",
[2025-10-11 01:46:07]  *** Listing of results directory ***
[2025-10-11 01:46:07] total 407720
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc    557409 Oct 10 04:20 pilot3.tar.gz
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc      5112 Oct 10 04:28 queuedata.json
[2025-10-11 01:46:07] -rwx------ 1 boinc boinc     36292 Oct 10 04:28 runpilot2-wrapper.sh
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc       100 Oct 11 00:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 01:46:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 00:56 run_atlas
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc       105 Oct 11 00:56 job.xml
[2025-10-11 01:46:07] -rw-r--r-- 2 boinc boinc 219576157 Oct 11 00:56 EVNT.46676267._001248.pool.root.1
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc      6549 Oct 11 00:56 init_data.xml
[2025-10-11 01:46:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 00:56 start_atlas.sh
[2025-10-11 01:46:07] drwxrwx--x 2 boinc boinc        68 Oct 11 00:56 shared
[2025-10-11 01:46:07] -rw-r--r-- 2 boinc boinc    569678 Oct 11 00:56 input.tar.gz
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc         0 Oct 11 00:56 boinc_lockfile
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc      2550 Oct 11 00:56 pandaJob.out
[2025-10-11 01:46:07] -rw------- 1 boinc boinc    975517 Oct 11 00:56 agis_schedconf.cvmfs.json
[2025-10-11 01:46:07] -rw------- 1 boinc boinc   1560580 Oct 11 00:56 agis_ddmendpoints.agis.ALL.json
[2025-10-11 01:46:07] drwx------ 5 boinc boinc      4096 Oct 11 00:56 pilot3
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc       529 Oct 11 01:45 boinc_task_state.xml
[2025-10-11 01:46:07] -rw------- 1 boinc boinc 192598058 Oct 11 01:45 HITS.46676269._030609.pool.root.1
[2025-10-11 01:46:07] -rw------- 1 boinc boinc        95 Oct 11 01:45 pilot_heartbeat.json
[2025-10-11 01:46:07] -rw------- 1 boinc boinc      1009 Oct 11 01:45 memory_monitor_summary.json
[2025-10-11 01:46:07] -rw------- 1 boinc boinc    274012 Oct 11 01:45 log.46676269._030609.job.log.tgz.1
[2025-10-11 01:46:07] -rw------- 1 boinc boinc      7785 Oct 11 01:45 heartbeat.json
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc        27 Oct 11 01:46 wrapper_checkpoint.txt
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc      8192 Oct 11 01:46 boinc_mmap_file
[2025-10-11 01:46:07] -rw------- 1 boinc boinc      4821 Oct 11 01:46 pilotlog.txt
[2025-10-11 01:46:07] -rw------- 1 boinc boinc    448702 Oct 11 01:46 log.46676269._030609.job.log.1
[2025-10-11 01:46:07] -rw------- 1 boinc boinc       357 Oct 11 01:46 output.list
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc       620 Oct 11 01:46 runtime_log
[2025-10-11 01:46:07] -rw------- 1 boinc boinc    737280 Oct 11 01:46 result.tar.gz
[2025-10-11 01:46:07] -rw------- 1 boinc boinc       655 Oct 11 01:46 SDyLDm42HR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh3bNDmr7QSRn.diag
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc      8716 Oct 11 01:46 runtime_log.err
[2025-10-11 01:46:07] -rw-r--r-- 1 boinc boinc     21970 Oct 11 01:46 stderr.txt
[2025-10-11 01:46:07] HITS file was successfully produced:
[2025-10-11 01:46:07] -rw------- 1 boinc boinc 192598058 Oct 11 01:45 shared/HITS.pool.root.1
[2025-10-11 01:46:07]  *** Contents of shared directory: ***
[2025-10-11 01:46:07] total 403816
[2025-10-11 01:46:07] -rw-r--r-- 2 boinc boinc 219576157 Oct 11 00:56 ATLAS.root_0
[2025-10-11 01:46:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 00:56 start_atlas.sh
[2025-10-11 01:46:07] -rw-r--r-- 2 boinc boinc    569678 Oct 11 00:56 input.tar.gz
[2025-10-11 01:46:07] -rw------- 1 boinc boinc 192598058 Oct 11 01:45 HITS.pool.root.1
[2025-10-11 01:46:07] -rw------- 1 boinc boinc    737280 Oct 11 01:46 result.tar.gz
01:46:09 (3867977): run_atlas exited; CPU time 16458.695953
01:46:09 (3867977): called boinc_finish(0)

</stderr_txt>
]]>

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