Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:27:58 (361681): wrapper (7.7.26015): starting
14:27:58 (361681): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 14:27:58] Arguments: --nthreads 12
[2025-10-10 14:27:58] Threads: 12
[2025-10-10 14:27:58] Checking for CVMFS
[2025-10-10 14:27:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:27:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:27:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:27:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:27:59] 2.13.2.0 239285 126742 210576 151558 0 71 28018161 32935936 23749 16776704 0 85676959 99.660 80298562 30430 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 14:27:59] CVMFS is ok
[2025-10-10 14:27:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 14:27:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 14:27:59] Further information can be found at the LHC@home message board.
[2025-10-10 14:27:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:27:59] Checking for apptainer binary...
[2025-10-10 14:27:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 14:27:59] Running /usr/bin/apptainer --version
[2025-10-10 14:28:00] apptainer version 1.4.3-1.el9
[2025-10-10 14:28:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:28:00] c-6-6.aglt2.org
[2025-10-10 14:28:00] apptainer works
[2025-10-10 14:28:00] Set ATHENA_PROC_NUMBER=12
[2025-10-10 14:28:00] Set ATHENA_CORE_NUMBER=12
[2025-10-10 14:28:00] Starting ATLAS job with PandaID=6837450184
[2025-10-10 14:28:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:03:18]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:03:18] 2025-10-11 01:02:24,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 21:03:18] 2025-10-11 01:02:24,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 21:03:18] 2025-10-11 01:02:24,587 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:03:18] 2025-10-11 01:02:24,588 | INFO     | sum of square deviations: 17972919898.222214
[2025-10-10 21:03:18] 2025-10-11 01:02:24,639 | INFO     | sum of deviations: -110159026561.77776
[2025-10-10 21:03:18] 2025-10-11 01:02:24,639 | INFO     | mean x: 1760132730.1111112
[2025-10-10 21:03:18] 2025-10-11 01:02:24,639 | INFO     | mean y: 2342162.8785529714
[2025-10-10 21:03:18] 2025-10-11 01:02:24,639 | INFO     | -- intersect: 10790489512.700287
[2025-10-10 21:03:18] 2025-10-11 01:02:24,639 | INFO     | intersect: 10790489512.700287
[2025-10-10 21:03:18] 2025-10-11 01:02:24,696 | INFO     | chi2: 3.839981435329215
[2025-10-10 21:03:18] 2025-10-11 01:02:24,697 | INFO     | sum of square deviations: 17285377333.717323
[2025-10-10 21:03:18] 2025-10-11 01:02:24,738 | INFO     | sum of deviations: -57273301774.18333
[2025-10-10 21:03:18] 2025-10-11 01:02:24,738 | INFO     | mean x: 1760132577.6230366
[2025-10-10 21:03:18] 2025-10-11 01:02:24,738 | INFO     | mean y: 2353814.5890052356
[2025-10-10 21:03:18] 2025-10-11 01:02:24,738 | INFO     | -- intersect: 5834370225.601067
[2025-10-10 21:03:18] 2025-10-11 01:02:24,738 | INFO     | intersect: 5834370225.601067
[2025-10-10 21:03:18] 2025-10-11 01:02:24,746 | INFO     | chi2: 2.2672993517316438
[2025-10-10 21:03:18] 2025-10-11 01:02:24,747 | INFO     | current chi2=2.2672993517316438 (change=40.95546059489582 %)
[2025-10-10 21:03:18] 2025-10-11 01:02:24,747 | INFO     | sum of square deviations: 16615463337.628677
[2025-10-10 21:03:18] 2025-10-11 01:02:24,792 | INFO     | sum of deviations: -55935415759.36334
[2025-10-10 21:03:18] 2025-10-11 01:02:24,792 | INFO     | mean x: 1760132425.1193633
[2025-10-10 21:03:18] 2025-10-11 01:02:24,793 | INFO     | mean y: 2354116.652519894
[2025-10-10 21:03:18] 2025-10-11 01:02:24,793 | INFO     | -- intersect: 5927782555.811482
[2025-10-10 21:03:18] 2025-10-11 01:02:24,793 | INFO     | intersect: 5927782555.811482
[2025-10-10 21:03:18] 2025-10-11 01:02:24,793 | INFO     | chi2: 2.2651336222508034
[2025-10-10 21:03:18] 2025-10-11 01:02:24,794 | INFO     | current chi2=2.2651336222508034 (change=0.09552022670435215 %)
[2025-10-10 21:03:18] 2025-10-11 01:02:24,794 | INFO     | right removable region: 376
[2025-10-10 21:03:18] 2025-10-11 01:02:24,839 | INFO     | sum of square deviations: 17285138639.468586
[2025-10-10 21:03:18] 2025-10-11 01:02:24,867 | INFO     | sum of deviations: -174124964558.1439
[2025-10-10 21:03:18] 2025-10-11 01:02:24,867 | INFO     | mean x: 1760132882.6256545
[2025-10-10 21:03:18] 2025-10-11 01:02:24,867 | INFO     | mean y: 2356284.07591623
[2025-10-10 21:03:18] 2025-10-11 01:02:24,868 | INFO     | -- intersect: 17733372632.709507
[2025-10-10 21:03:18] 2025-10-11 01:02:24,868 | INFO     | intersect: 17733372632.709507
[2025-10-10 21:03:18] 2025-10-11 01:02:24,868 | INFO     | chi2: 2.2307834465369396
[2025-10-10 21:03:18] 2025-10-11 01:02:24,868 | INFO     | current chi2=2.2307834465369396 (change=41.90640022337278 %)
[2025-10-10 21:03:18] 2025-10-11 01:02:24,869 | INFO     | sum of square deviations: 16615148214.827604
[2025-10-10 21:03:18] 2025-10-11 01:02:24,874 | INFO     | sum of deviations: -175203367579.20685
[2025-10-10 21:03:18] 2025-10-11 01:02:24,874 | INFO     | mean x: 1760133035.137931
[2025-10-10 21:03:18] 2025-10-11 01:02:24,874 | INFO     | mean y: 2356511.50397878
[2025-10-10 21:03:18] 2025-10-11 01:02:24,874 | INFO     | -- intersect: 18562602327.931423
[2025-10-10 21:03:18] 2025-10-11 01:02:24,875 | INFO     | intersect: 18562602327.931423
[2025-10-10 21:03:18] 2025-10-11 01:02:24,875 | INFO     | chi2: 2.1875072086887872
[2025-10-10 21:03:18] 2025-10-11 01:02:24,875 | INFO     | current chi2=2.1875072086887872 (change=1.9399569203068214 %)
[2025-10-10 21:03:18] 2025-10-11 01:02:24,930 | INFO     | left removable region: 20
[2025-10-10 21:03:18] 2025-10-11 01:02:24,930 | INFO     | sum of square deviations: 13990402251.873589
[2025-10-10 21:03:18] 2025-10-11 01:02:24,970 | INFO     | sum of deviations: -92616549779.78372
[2025-10-10 21:03:18] 2025-10-11 01:02:24,970 | INFO     | mean x: 1760133004.6601124
[2025-10-10 21:03:18] 2025-10-11 01:02:24,970 | INFO     | mean y: 2362226.092696629
[2025-10-10 21:03:18] 2025-10-11 01:02:24,970 | INFO     | -- intersect: 11654453646.359928
[2025-10-10 21:03:18] 2025-10-11 01:02:24,971 | INFO     | intersect: 11654453646.359928
[2025-10-10 21:03:18] 2025-10-11 01:02:24,971 | INFO     | chi2: 0.5272230479631126
[2025-10-10 21:03:18] 2025-10-11 01:02:24,971 | INFO     | -- intersect: 11654453646.359928
[2025-10-10 21:03:18] 2025-10-11 01:02:24,972 | INFO     | current memory leak: -6.62 B/s (using 356 data points, chi2=0.53)
[2025-10-10 21:03:18] 2025-10-11 01:02:24,972 | INFO     | could have reported an average CPU frequency of 2601 MHz (16 samples)
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | ..............................
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | . Timing measurements:
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | . get job = 0 s
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | . initial setup = 4 s
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | . payload setup = 15 s
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | . stage-in = 0 s
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | . payload execution = 23563 s
[2025-10-10 21:03:18] 2025-10-11 01:02:24,973 | INFO     | . stage-out = 7 s
[2025-10-10 21:03:18] 2025-10-11 01:02:25,010 | INFO     | . log creation = 1 s
[2025-10-10 21:03:18] 2025-10-11 01:02:25,010 | INFO     | ..............................
[2025-10-10 21:03:18] 2025-10-11 01:02:25,426 | INFO     | time since job start (23641s) is within the limit (172800.0s)
[2025-10-10 21:03:18] 2025-10-11 01:02:26,369 | INFO     | 
[2025-10-10 21:03:18] 2025-10-11 01:02:26,369 | INFO     | job summary report
[2025-10-10 21:03:18] 2025-10-11 01:02:26,369 | INFO     | --------------------------------------------------
[2025-10-10 21:03:18] 2025-10-11 01:02:26,369 | INFO     | PanDA job id: 6837450184
[2025-10-10 21:03:18] 2025-10-11 01:02:26,369 | INFO     | task id: 46676269
[2025-10-10 21:03:18] 2025-10-11 01:02:26,369 | INFO     | errors: (none)
[2025-10-10 21:03:18] 2025-10-11 01:02:26,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | pilot state: finished 
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | transexitcode: 0
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | exeerrorcode: 0
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | exeerrordiag: 
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | exitcode: 0
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | exitmsg: OK
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | cpuconsumptiontime: 52325 s
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | nevents: 400
[2025-10-10 21:03:18] 2025-10-11 01:02:26,370 | INFO     | neventsw: 0
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | pid: 372665
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | pgrp: 372665
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | corecount: 12
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | event service: False
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2349124, 23581: 2383642, 23590: 2392640, 23592: 2392696, 23620: 2393018}
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | --------------------------------------------------
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | 
[2025-10-10 21:03:18] 2025-10-11 01:02:26,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 21:03:18] 2025-10-11 01:02:26,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:03:18] 2025-10-11 01:02:26,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:03:18] 2025-10-11 01:02:26,453 | INFO     | job 6837450184 has completed (purged errors)
[2025-10-10 21:03:18] 2025-10-11 01:02:26,453 | INFO     | overall cleanup function is called
[2025-10-10 21:03:18] 2025-10-11 01:02:27,463 | INFO     | --- collectZombieJob: --- 10, [372665]
[2025-10-10 21:03:18] 2025-10-11 01:02:27,464 | INFO     | zombie collector waiting for pid 372665
[2025-10-10 21:03:18] 2025-10-11 01:02:27,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:03:18] 2025-10-11 01:02:27,465 | INFO     | collected zombie processes
[2025-10-10 21:03:18] 2025-10-11 01:02:27,465 | INFO     | will attempt to kill all subprocesses of pid=372665
[2025-10-10 21:03:18] 2025-10-11 01:02:29,891 | INFO     | process IDs to be killed: [372665] (in reverse order)
[2025-10-10 21:03:18] 2025-10-11 01:02:30,747 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:03:18] 2025-10-11 01:02:30,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:03:18] 2025-10-11 01:02:30,796 | INFO     | did not find any defunct processes belonging to 372665
[2025-10-10 21:03:18] 2025-10-11 01:02:30,830 | INFO     | did not find any defunct processes belonging to 372665
[2025-10-10 21:03:18] 2025-10-11 01:02:30,830 | INFO     | ready for new job
[2025-10-10 21:03:18] 2025-10-11 01:02:30,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:03:18] 2025-10-11 01:02:30,838 | INFO     | ***************************************
[2025-10-10 21:03:18] 2025-10-11 01:02:30,838 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 21:03:18] 2025-10-11 01:02:30,838 | INFO     | ***************************************
[2025-10-10 21:03:18] 2025-10-11 01:02:30,839 | INFO     | 
[2025-10-10 21:03:18] 2025-10-11 01:02:30,853 | INFO     | architecture information:
[2025-10-10 21:03:18] 2025-10-11 01:02:30,858 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:03:18] 2025-10-11 01:02:30,957 | INFO     | cat /etc/os-release:
[2025-10-10 21:03:18] NAME="CentOS Linux"
[2025-10-10 21:03:18] VERSION="7 (Core)"
[2025-10-10 21:03:18] ID="centos"
[2025-10-10 21:03:18] ID_LIKE="rhel fedora"
[2025-10-10 21:03:18] VERSION_ID="7"
[2025-10-10 21:03:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:03:18] ANSI_COLOR="0;31"
[2025-10-10 21:03:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:03:18] HOME_URL="https://www.centos.org/"
[2025-10-10 21:03:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:03:18] 
[2025-10-10 21:03:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:03:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:03:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:03:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:03:18] 
[2025-10-10 21:03:18] 2025-10-11 01:02:30,957 | INFO     | ***************************************
[2025-10-10 21:03:18] 2025-10-11 01:02:31,469 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 21:03:18] 2025-10-11 01:02:31,715 | INFO     | sufficient remaining disk space (75751227392 B)
[2025-10-10 21:03:18] 2025-10-11 01:02:31,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:03:18] 2025-10-11 01:02:31,716 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:03:18] 2025-10-11 01:02:31,716 | INFO     | update_server=False
[2025-10-10 21:03:18] 2025-10-11 01:02:31,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:03:18] 2025-10-11 01:02:31,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:03:18] 2025-10-11 01:02:31,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:03:18] 2025-10-11 01:02:32,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:03:18] 2025-10-11 01:02:32,016 | INFO     | aborting loop
[2025-10-10 21:03:18] 2025-10-11 01:02:32,152 | INFO     | all data control threads have been joined
[2025-10-10 21:03:18] 2025-10-11 01:02:32,290 | INFO     | all payload control threads have been joined
[2025-10-10 21:03:18] 2025-10-11 01:02:32,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:03:18] 2025-10-11 01:02:32,722 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:32,732 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:32,864 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,022 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,066 | INFO     | all job control threads have been joined
[2025-10-10 21:03:18] 2025-10-11 01:02:33,076 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,159 | INFO     | [data] control thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,296 | INFO     | [payload] control thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,565 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,964 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,964 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:33,999 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:34,086 | INFO     | [job] control thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:34,147 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:34,164 | INFO     | [job] validate thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:34,723 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:02:35,757 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:03:18] 2025-10-11 01:03:01,047 | INFO     | PID=365413 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 21:03:18] 2025-10-11 01:03:01,047 | INFO     | .. there are 41 such processes running
[2025-10-10 21:03:18] 2025-10-11 01:03:01,047 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:03:18] 2025-10-11 01:03:01,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:03:18] 2025-10-11 01:03:01,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:03:18] 2025-10-11 01:03:10,226 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:03:18] 2025-10-11 01:03:11,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269460473664)>', '<ExcThread(monitor, started 140269118805760)>']
[2025-10-10 21:03:18] 2025-10-11 01:03:11,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:03:18] 2025-10-11 01:03:11,231 | INFO     | [monitor] control thread has ended
[2025-10-10 21:03:18] 2025-10-11 01:03:16,201 | INFO     | all workflow threads have been joined
[2025-10-10 21:03:18] 2025-10-11 01:03:16,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:03:18] 2025-10-11 01:03:16,202 | INFO     | traces error code: 0
[2025-10-10 21:03:18] 2025-10-11 01:03:16,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:03:18] 2025-10-11 01:03:17,955 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:03:18] 2025-10-11 01:03:18,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:03:18] 2025-10-11 01:03:18,038 [wrapper] pilotpid: 365413
[2025-10-10 21:03:18] 2025-10-11 01:03:18,093 [wrapper] Pilot exit status: 0
[2025-10-10 21:03:18] 2025-10-11 01:03:18,173 [wrapper] pandaids: 6837450184
[2025-10-10 21:03:18] 2025-10-11 01:03:18,301 [wrapper] cleanup supervisor_pilot 1476336 365414
[2025-10-10 21:03:18] 2025-10-11 01:03:18,306 [wrapper] Test setup, not cleaning
[2025-10-10 21:03:18] 2025-10-11 01:03:18,309 [wrapper] apfmon messages muted
[2025-10-10 21:03:18] 2025-10-11 01:03:18,313 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:03:18] 2025-10-11 01:03:18,316 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:03:18]  *** Error codes and diagnostics ***
[2025-10-10 21:03:18]     "exeErrorCode": 0,
[2025-10-10 21:03:18]     "exeErrorDiag": "",
[2025-10-10 21:03:18]     "pilotErrorCode": 0,
[2025-10-10 21:03:18]     "pilotErrorDiag": "",
[2025-10-10 21:03:18]  *** Listing of results directory ***
[2025-10-10 21:03:18] total 420468
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 01:14 pilot3.tar.gz
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 01:37 queuedata.json
[2025-10-10 21:03:18] -rwx------. 1 boincer umatlas     36292 Oct 10 01:38 runpilot2-wrapper.sh
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas       100 Oct 10 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:03:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 14:27 run_atlas
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas       105 Oct 10 14:27 job.xml
[2025-10-10 21:03:18] -rw-r--r--. 2 boincer umatlas 220327254 Oct 10 14:27 EVNT.46676267._001351.pool.root.1
[2025-10-10 21:03:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:27 start_atlas.sh
[2025-10-10 21:03:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 14:27 shared
[2025-10-10 21:03:18] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 14:27 input.tar.gz
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas         0 Oct 10 14:27 boinc_lockfile
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 14:28 pandaJob.out
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas    975525 Oct 10 14:28 agis_schedconf.cvmfs.json
[2025-10-10 21:03:18] drwx------. 5 boincer umatlas      4096 Oct 10 14:28 pilot3
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas 199798135 Oct 10 21:00 HITS.46676269._033190.pool.root.1
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas      6657 Oct 10 21:00 init_data.xml
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas       531 Oct 10 21:00 boinc_task_state.xml
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas      1041 Oct 10 21:01 memory_monitor_summary.json
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas   1560580 Oct 10 21:01 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas    621973 Oct 10 21:01 log.46676269._033190.job.log.tgz.1
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas        95 Oct 10 21:02 pilot_heartbeat.json
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas      7821 Oct 10 21:02 heartbeat.json
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 21:03 boinc_mmap_file
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas        28 Oct 10 21:03 wrapper_checkpoint.txt
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas      4823 Oct 10 21:03 pilotlog.txt
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas   2645794 Oct 10 21:03 log.46676269._033190.job.log.1
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas       357 Oct 10 21:03 output.list
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas       620 Oct 10 21:03 runtime_log
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas   3287040 Oct 10 21:03 result.tar.gz
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas      8691 Oct 10 21:03 runtime_log.err
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas       654 Oct 10 21:03 iACLDmk0KR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgUcNDmxLFSBn.diag
[2025-10-10 21:03:18] -rw-r--r--. 1 boincer umatlas     20989 Oct 10 21:03 stderr.txt
[2025-10-10 21:03:18] HITS file was successfully produced:
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas 199798135 Oct 10 21:00 shared/HITS.pool.root.1
[2025-10-10 21:03:18]  *** Contents of shared directory: ***
[2025-10-10 21:03:18] total 414072
[2025-10-10 21:03:18] -rw-r--r--. 2 boincer umatlas 220327254 Oct 10 14:27 ATLAS.root_0
[2025-10-10 21:03:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:27 start_atlas.sh
[2025-10-10 21:03:18] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 14:27 input.tar.gz
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas 199798135 Oct 10 21:00 HITS.pool.root.1
[2025-10-10 21:03:18] -rw-------. 1 boincer umatlas   3287040 Oct 10 21:03 result.tar.gz
21:03:19 (361681): run_atlas exited; CPU time 53187.617424
21:03:19 (361681): called boinc_finish(0)

</stderr_txt>
]]>

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