Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:16:31 (7207): wrapper (7.7.26015): starting
07:16:31 (7207): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 07:16:31] Arguments: --nthreads 8
[2025-10-10 07:16:31] Threads: 8
[2025-10-10 07:16:31] Checking for CVMFS
[2025-10-10 07:16:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 07:16:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 07:16:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 07:16:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 07:16:32] 2.11.2.0 2698 5550 76500 151543 2 59 19999230 20275200 1 130560 0 3123138 99.988 183039 35152 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 07:16:32] CVMFS is ok
[2025-10-10 07:16:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 07:16:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 07:16:32] Further information can be found at the LHC@home message board.
[2025-10-10 07:16:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 07:16:32] Checking for apptainer binary...
[2025-10-10 07:16:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 07:16:32] Running /usr/bin/apptainer --version
[2025-10-10 07:16:32] apptainer version 1.3.2-1.el7
[2025-10-10 07:16:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 07:16:33] c-204-2.aglt2.org
[2025-10-10 07:16:33] apptainer works
[2025-10-10 07:16:33] Set ATHENA_PROC_NUMBER=8
[2025-10-10 07:16:33] Set ATHENA_CORE_NUMBER=8
[2025-10-10 07:16:33] Starting ATLAS job with PandaID=6837397458
[2025-10-10 07:16:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 09:21:09]  *** The last 200 lines of the pilot log: ***
[2025-10-10 09:21:09] 2025-10-10 13:20:04,095 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 09:21:09] 2025-10-10 13:20:04,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 09:21:09] 2025-10-10 13:20:04,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 09:21:09] 2025-10-10 13:20:04,095 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 09:21:09] 2025-10-10 13:20:04,098 | INFO     | fitting pss+swap vs Time
[2025-10-10 09:21:09] 2025-10-10 13:20:04,098 | INFO     | sum of square deviations: 549294020.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,099 | INFO     | sum of deviations: -1252577782.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,099 | INFO     | mean x: 1760098702.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,099 | INFO     | mean y: 2504503.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,099 | INFO     | -- intersect: 4016130080.5226517
[2025-10-10 09:21:09] 2025-10-10 13:20:04,100 | INFO     | intersect: 4016130080.5226517
[2025-10-10 09:21:09] 2025-10-10 13:20:04,100 | INFO     | chi2: 2.3524800396310273
[2025-10-10 09:21:09] 2025-10-10 13:20:04,100 | INFO     | sum of square deviations: 483971865.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,101 | INFO     | sum of deviations: 7143809613.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,101 | INFO     | mean x: 1760098549.5
[2025-10-10 09:21:09] 2025-10-10 13:20:04,101 | INFO     | mean y: 2523448.8103448274
[2025-10-10 09:21:09] 2025-10-10 13:20:04,101 | INFO     | -- intersect: -25977930885.54534
[2025-10-10 09:21:09] 2025-10-10 13:20:04,101 | INFO     | intersect: -25977930885.54534
[2025-10-10 09:21:09] 2025-10-10 13:20:04,101 | INFO     | chi2: 1.5124353430069404
[2025-10-10 09:21:09] 2025-10-10 13:20:04,101 | INFO     | current chi2=1.5124353430069404 (change=35.70889794907008 %)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,102 | INFO     | sum of square deviations: 424045160.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,102 | INFO     | sum of deviations: 6895898232.000009
[2025-10-10 09:21:09] 2025-10-10 13:20:04,102 | INFO     | mean x: 1760098397.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,102 | INFO     | mean y: 2522817.7297297297
[2025-10-10 09:21:09] 2025-10-10 13:20:04,103 | INFO     | -- intersect: -28620512106.23532
[2025-10-10 09:21:09] 2025-10-10 13:20:04,103 | INFO     | intersect: -28620512106.23532
[2025-10-10 09:21:09] 2025-10-10 13:20:04,103 | INFO     | chi2: 1.515036020846105
[2025-10-10 09:21:09] 2025-10-10 13:20:04,103 | INFO     | current chi2=1.515036020846105 (change=-0.17195299297846262 %)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,103 | INFO     | right removable region: 110
[2025-10-10 09:21:09] 2025-10-10 13:20:04,103 | INFO     | sum of square deviations: 483971865.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,104 | INFO     | sum of deviations: -18561909325.5
[2025-10-10 09:21:09] 2025-10-10 13:20:04,104 | INFO     | mean x: 1760098854.5
[2025-10-10 09:21:09] 2025-10-10 13:20:04,104 | INFO     | mean y: 2544106.853448276
[2025-10-10 09:21:09] 2025-10-10 13:20:04,104 | INFO     | -- intersect: 67508111483.47237
[2025-10-10 09:21:09] 2025-10-10 13:20:04,105 | INFO     | intersect: 67508111483.47237
[2025-10-10 09:21:09] 2025-10-10 13:20:04,105 | INFO     | chi2: 0.9762627567552865
[2025-10-10 09:21:09] 2025-10-10 13:20:04,105 | INFO     | current chi2=0.9762627567552865 (change=58.500699674016886 %)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,105 | INFO     | sum of square deviations: 424045160.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,106 | INFO     | sum of deviations: -15514215339.000002
[2025-10-10 09:21:09] 2025-10-10 13:20:04,106 | INFO     | mean x: 1760099007.0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,106 | INFO     | mean y: 2536300.2972972975
[2025-10-10 09:21:09] 2025-10-10 13:20:04,106 | INFO     | -- intersect: 64397929971.476265
[2025-10-10 09:21:09] 2025-10-10 13:20:04,106 | INFO     | intersect: 64397929971.476265
[2025-10-10 09:21:09] 2025-10-10 13:20:04,107 | INFO     | chi2: 0.9704059466334541
[2025-10-10 09:21:09] 2025-10-10 13:20:04,107 | INFO     | current chi2=0.9704059466334541 (change=0.5999214946289769 %)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,107 | INFO     | left removable region: 20
[2025-10-10 09:21:09] 2025-10-10 13:20:04,107 | INFO     | sum of square deviations: 226022842.5
[2025-10-10 09:21:09] 2025-10-10 13:20:04,108 | INFO     | sum of deviations: 13675833.999999678
[2025-10-10 09:21:09] 2025-10-10 13:20:04,108 | INFO     | mean x: 1760098976.5
[2025-10-10 09:21:09] 2025-10-10 13:20:04,108 | INFO     | mean y: 2534734.488888889
[2025-10-10 09:21:09] 2025-10-10 13:20:04,108 | INFO     | -- intersect: -103962560.91692096
[2025-10-10 09:21:09] 2025-10-10 13:20:04,108 | INFO     | intersect: -103962560.91692096
[2025-10-10 09:21:09] 2025-10-10 13:20:04,108 | INFO     | chi2: 0.024852418731747046
[2025-10-10 09:21:09] 2025-10-10 13:20:04,109 | INFO     | -- intersect: -103962560.91692096
[2025-10-10 09:21:09] 2025-10-10 13:20:04,109 | INFO     | current memory leak: 0.06 B/s (using 90 data points, chi2=0.02)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,109 | INFO     | could have reported an average CPU frequency of 1920 MHz (8 samples)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,109 | INFO     | ..............................
[2025-10-10 09:21:09] 2025-10-10 13:20:04,109 | INFO     | . Timing measurements:
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | . get job = 0 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | . initial setup = 2 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | . payload setup = 8 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | . stage-in = 0 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | . payload execution = 7351 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | . stage-out = 0 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | . log creation = 0 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,110 | INFO     | ..............................
[2025-10-10 09:21:09] 2025-10-10 13:20:04,202 | INFO     | 
[2025-10-10 09:21:09] 2025-10-10 13:20:04,202 | INFO     | job summary report
[2025-10-10 09:21:09] 2025-10-10 13:20:04,202 | INFO     | --------------------------------------------------
[2025-10-10 09:21:09] 2025-10-10 13:20:04,202 | INFO     | PanDA job id: 6837397458
[2025-10-10 09:21:09] 2025-10-10 13:20:04,202 | INFO     | task id: 46676269
[2025-10-10 09:21:09] 2025-10-10 13:20:04,203 | INFO     | errors: (none)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 09:21:09] 2025-10-10 13:20:04,203 | INFO     | pilot state: finished 
[2025-10-10 09:21:09] 2025-10-10 13:20:04,203 | INFO     | transexitcode: 0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,203 | INFO     | exeerrorcode: 0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,203 | INFO     | exeerrordiag: 
[2025-10-10 09:21:09] 2025-10-10 13:20:04,204 | INFO     | exitcode: 0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,204 | INFO     | exitmsg: OK
[2025-10-10 09:21:09] 2025-10-10 13:20:04,204 | INFO     | cpuconsumptiontime: 54830 s
[2025-10-10 09:21:09] 2025-10-10 13:20:04,204 | INFO     | nevents: 400
[2025-10-10 09:21:09] 2025-10-10 13:20:04,204 | INFO     | neventsw: 0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,204 | INFO     | pid: 17429
[2025-10-10 09:21:09] 2025-10-10 13:20:04,205 | INFO     | pgrp: 17429
[2025-10-10 09:21:09] 2025-10-10 13:20:04,205 | INFO     | corecount: 8
[2025-10-10 09:21:09] 2025-10-10 13:20:04,205 | INFO     | event service: False
[2025-10-10 09:21:09] 2025-10-10 13:20:04,205 | INFO     | sizes: {0: 2348806, 1: 2348806, 6: 2349096, 11: 2349124, 7363: 2376485, 7365: 2385483, 7368: 2385667, 7375: 2385861}
[2025-10-10 09:21:09] 2025-10-10 13:20:04,205 | INFO     | --------------------------------------------------
[2025-10-10 09:21:09] 2025-10-10 13:20:04,205 | INFO     | 
[2025-10-10 09:21:09] 2025-10-10 13:20:04,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 09:21:09] 2025-10-10 13:20:04,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 09:21:09] 2025-10-10 13:20:04,237 | INFO     | job 6837397458 has completed (purged errors)
[2025-10-10 09:21:09] 2025-10-10 13:20:04,237 | INFO     | overall cleanup function is called
[2025-10-10 09:21:09] 2025-10-10 13:20:05,245 | INFO     | --- collectZombieJob: --- 10, [17429]
[2025-10-10 09:21:09] 2025-10-10 13:20:05,246 | INFO     | zombie collector waiting for pid 17429
[2025-10-10 09:21:09] 2025-10-10 13:20:05,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 09:21:09] 2025-10-10 13:20:05,246 | INFO     | collected zombie processes
[2025-10-10 09:21:09] 2025-10-10 13:20:05,246 | INFO     | will attempt to kill all subprocesses of pid=17429
[2025-10-10 09:21:09] 2025-10-10 13:20:05,326 | INFO     | process IDs to be killed: [17429] (in reverse order)
[2025-10-10 09:21:09] 2025-10-10 13:20:05,380 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 09:21:09] 2025-10-10 13:20:05,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 09:21:09] 2025-10-10 13:20:05,384 | INFO     | did not find any defunct processes belonging to 17429
[2025-10-10 09:21:09] 2025-10-10 13:20:05,387 | INFO     | did not find any defunct processes belonging to 17429
[2025-10-10 09:21:09] 2025-10-10 13:20:05,387 | INFO     | ready for new job
[2025-10-10 09:21:09] 2025-10-10 13:20:05,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 09:21:09] 2025-10-10 13:20:05,389 | INFO     | ***************************************
[2025-10-10 09:21:09] 2025-10-10 13:20:05,389 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 09:21:09] 2025-10-10 13:20:05,389 | INFO     | ***************************************
[2025-10-10 09:21:09] 2025-10-10 13:20:05,390 | INFO     | 
[2025-10-10 09:21:09] 2025-10-10 13:20:05,390 | INFO     | architecture information:
[2025-10-10 09:21:09] 2025-10-10 13:20:05,391 | INFO     | executing command: cat /etc/os-release
[2025-10-10 09:21:09] 2025-10-10 13:20:05,409 | INFO     | cat /etc/os-release:
[2025-10-10 09:21:09] NAME="CentOS Linux"
[2025-10-10 09:21:09] VERSION="7 (Core)"
[2025-10-10 09:21:09] ID="centos"
[2025-10-10 09:21:09] ID_LIKE="rhel fedora"
[2025-10-10 09:21:09] VERSION_ID="7"
[2025-10-10 09:21:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 09:21:09] ANSI_COLOR="0;31"
[2025-10-10 09:21:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 09:21:09] HOME_URL="https://www.centos.org/"
[2025-10-10 09:21:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 09:21:09] 
[2025-10-10 09:21:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 09:21:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 09:21:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 09:21:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 09:21:09] 
[2025-10-10 09:21:09] 2025-10-10 13:20:05,409 | INFO     | ***************************************
[2025-10-10 09:21:09] 2025-10-10 13:20:05,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 09:21:09] 2025-10-10 13:20:05,932 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-10-10 09:21:09] 2025-10-10 13:20:05,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 09:21:09] 2025-10-10 13:20:05,933 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 09:21:09] 2025-10-10 13:20:05,933 | INFO     | update_server=False
[2025-10-10 09:21:09] 2025-10-10 13:20:05,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 09:21:09] 2025-10-10 13:20:05,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 09:21:09] 2025-10-10 13:20:05,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 09:21:09] 2025-10-10 13:20:05,934 | INFO     | aborting loop
[2025-10-10 09:21:09] 2025-10-10 13:20:06,229 | INFO     | all data control threads have been joined
[2025-10-10 09:21:09] 2025-10-10 13:20:06,557 | INFO     | all job control threads have been joined
[2025-10-10 09:21:09] 2025-10-10 13:20:06,935 | INFO     | [job] retrieve thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:06,940 | INFO     | [job] job monitor thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:06,940 | INFO     | [job] queue monitor thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:06,964 | INFO     | all payload control threads have been joined
[2025-10-10 09:21:09] 2025-10-10 13:20:07,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 09:21:09] 2025-10-10 13:20:07,143 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:07,170 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:07,235 | INFO     | [data] control thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:07,563 | INFO     | [job] control thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:07,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 09:21:09] 2025-10-10 13:20:07,748 | INFO     | [payload] validate_post thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:07,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:07,965 | INFO     | [payload] control thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:08,120 | INFO     | [job] validate thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:08,140 | INFO     | [data] copytool_in thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:08,251 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:08,420 | INFO     | [payload] failed_post thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:09,031 | INFO     | [data] copytool_out thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:11,646 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 09:21:09] 2025-10-10 13:20:36,492 | INFO     | PID=10888 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 09:21:09] 2025-10-10 13:20:36,493 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 09:21:09] 2025-10-10 13:20:36,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 09:21:09] 2025-10-10 13:20:36,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 09:21:09] 2025-10-10 13:21:03,202 | INFO     | [monitor] cgroup control has ended
[2025-10-10 09:21:09] 2025-10-10 13:21:04,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793842841408)>', '<ExcThread(monitor, started 139793241458432)>']
[2025-10-10 09:21:09] 2025-10-10 13:21:04,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 09:21:09] 2025-10-10 13:21:04,638 | INFO     | [monitor] control thread has ended
[2025-10-10 09:21:09] 2025-10-10 13:21:09,234 | INFO     | all workflow threads have been joined
[2025-10-10 09:21:09] 2025-10-10 13:21:09,234 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 09:21:09] 2025-10-10 13:21:09,234 | INFO     | traces error code: 0
[2025-10-10 09:21:09] 2025-10-10 13:21:09,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 09:21:09] 2025-10-10 13:21:09,356 [wrapper] ==== pilot stdout END ====
[2025-10-10 09:21:09] 2025-10-10 13:21:09,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 09:21:09] 2025-10-10 13:21:09,366 [wrapper] pilotpid: 10888
[2025-10-10 09:21:09] 2025-10-10 13:21:09,371 [wrapper] Pilot exit status: 0
[2025-10-10 09:21:09] 2025-10-10 13:21:09,391 [wrapper] pandaids: 6837397458
[2025-10-10 09:21:09] 2025-10-10 13:21:09,441 [wrapper] cleanup supervisor_pilot 14312 10889
[2025-10-10 09:21:09] 2025-10-10 13:21:09,446 [wrapper] Test setup, not cleaning
[2025-10-10 09:21:09] 2025-10-10 13:21:09,451 [wrapper] apfmon messages muted
[2025-10-10 09:21:09] 2025-10-10 13:21:09,455 [wrapper] ==== wrapper stdout END ====
[2025-10-10 09:21:09] 2025-10-10 13:21:09,460 [wrapper] ==== wrapper stderr END ====
[2025-10-10 09:21:09]  *** Error codes and diagnostics ***
[2025-10-10 09:21:09]     "exeErrorCode": 0,
[2025-10-10 09:21:09]     "exeErrorDiag": "",
[2025-10-10 09:21:09]     "pilotErrorCode": 0,
[2025-10-10 09:21:09]     "pilotErrorDiag": "",
[2025-10-10 09:21:09]  *** Listing of results directory ***
[2025-10-10 09:21:09] total 417180
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 22:20 pilot3.tar.gz
[2025-10-10 09:21:09] -rwx------ 1 boincer umatlas     36292 Oct  9 22:21 runpilot2-wrapper.sh
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 22:21 queuedata.json
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas       100 Oct 10 07:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 09:21:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 07:16 run_atlas
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas       105 Oct 10 07:16 job.xml
[2025-10-10 09:21:09] -rw-r--r-- 2 boincer umatlas 224285180 Oct 10 07:16 EVNT.46676267._001245.pool.root.1
[2025-10-10 09:21:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 07:16 start_atlas.sh
[2025-10-10 09:21:09] drwxrwx--x 2 boincer umatlas      4096 Oct 10 07:16 shared
[2025-10-10 09:21:09] -rw-r--r-- 2 boincer umatlas    569674 Oct 10 07:16 input.tar.gz
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas         0 Oct 10 07:16 boinc_lockfile
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas      2549 Oct 10 07:16 pandaJob.out
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas    975528 Oct 10 07:16 agis_schedconf.cvmfs.json
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas   1560580 Oct 10 07:16 agis_ddmendpoints.agis.ALL.json
[2025-10-10 09:21:09] drwx------ 5 boincer umatlas      4096 Oct 10 07:16 pilot3
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas 196139596 Oct 10 09:19 HITS.46676269._030538.pool.root.1
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas       529 Oct 10 09:19 boinc_task_state.xml
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas      1048 Oct 10 09:19 memory_monitor_summary.json
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas    380218 Oct 10 09:19 log.46676269._030538.job.log.tgz.1
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas      7843 Oct 10 09:20 heartbeat.json
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas        95 Oct 10 09:20 pilot_heartbeat.json
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas        27 Oct 10 09:21 wrapper_checkpoint.txt
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas      5909 Oct 10 09:21 init_data.xml
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas      4746 Oct 10 09:21 pilotlog.txt
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 09:21 boinc_mmap_file
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas   1050219 Oct 10 09:21 log.46676269._030538.job.log.1
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas       357 Oct 10 09:21 output.list
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas       620 Oct 10 09:21 runtime_log
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas   1454080 Oct 10 09:21 result.tar.gz
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas      8698 Oct 10 09:21 runtime_log.err
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas       658 Oct 10 09:21 njQKDmbwHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF3bNDmt1fvHm.diag
[2025-10-10 09:21:09] -rw-r--r-- 1 boincer umatlas     20855 Oct 10 09:21 stderr.txt
[2025-10-10 09:21:09] HITS file was successfully produced:
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas 196139596 Oct 10 09:19 shared/HITS.pool.root.1
[2025-10-10 09:21:09]  *** Contents of shared directory: ***
[2025-10-10 09:21:09] total 412576
[2025-10-10 09:21:09] -rw-r--r-- 2 boincer umatlas 224285180 Oct 10 07:16 ATLAS.root_0
[2025-10-10 09:21:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 07:16 start_atlas.sh
[2025-10-10 09:21:09] -rw-r--r-- 2 boincer umatlas    569674 Oct 10 07:16 input.tar.gz
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas 196139596 Oct 10 09:19 HITS.pool.root.1
[2025-10-10 09:21:09] -rw------- 1 boincer umatlas   1454080 Oct 10 09:21 result.tar.gz
09:21:10 (7207): run_atlas exited; CPU time 54831.062026
09:21:10 (7207): called boinc_finish(0)

</stderr_txt>
]]>

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