Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 11:43:53 (49684): vboxwrapper version 26210
2025-10-10 11:43:53 (49684): BOINC client version: 7.14.2
2025-10-10 11:43:54 (49684): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2025-10-10 11:43:54 (49684): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 11:43:55 (49684): Create VM. (boinc_bd71edacf5fcc87b, slot#8)
2025-10-10 11:43:55 (49684): Setting Memory Size for VM. (4200MB)
2025-10-10 11:43:56 (49684): Setting CPU Count for VM. (2)
2025-10-10 11:43:57 (49684): Setting Chipset Options for VM.
2025-10-10 11:43:57 (49684): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 11:43:57 (49684): Setting Boot Options for VM.
2025-10-10 11:43:58 (49684): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 11:43:58 (49684): Enabling VM Network Access.
2025-10-10 11:43:58 (49684): Disabling USB Support for VM.
2025-10-10 11:43:58 (49684): Disabling COM Port Support for VM.
2025-10-10 11:43:59 (49684): Disabling LPT Port Support for VM.
2025-10-10 11:43:59 (49684): Disabling Audio Support for VM.
2025-10-10 11:43:59 (49684): Disabling Clipboard Support for VM.
2025-10-10 11:43:59 (49684): Disabling Drag and Drop Support for VM.
2025-10-10 11:44:00 (49684): Adding storage controller(s) to VM.
2025-10-10 11:44:00 (49684): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 11:44:00 (49684): Adding VirtualBox Guest Additions to VM.
2025-10-10 11:44:01 (49684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 11:44:01 (49684): forwarding host port 55759 to guest port 80
2025-10-10 11:44:01 (49684): Enabling remote desktop for VM.
2025-10-10 11:44:02 (49684): Enabling shared directory for VM.
2025-10-10 11:44:02 (49684): Starting VM using VBoxManage interface. (boinc_bd71edacf5fcc87b, slot#8)
2025-10-10 11:44:08 (49684): Successfully started VM. (PID = '494264')
2025-10-10 11:44:08 (49684): Reporting VM Process ID to BOINC.
2025-10-10 11:44:08 (49684): Guest Log: BIOS: VirtualBox 6.1.40
2025-10-10 11:44:08 (49684): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 11:44:08 (49684): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 11:44:08 (49684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 11:44:08 (49684): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 11:44:08 (49684): Detected: Web Application Enabled (http://localhost:55759)
2025-10-10 11:44:08 (49684): Detected: Remote Desktop Enabled (localhost:55760)
2025-10-10 11:44:08 (49684): Preference change detected
2025-10-10 11:44:08 (49684): Setting CPU throttle for VM. (100%)
2025-10-10 11:44:09 (49684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 11:44:10 (49684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 11:44:10 (49684): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 11:44:13 (49684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 11:44:13 (49684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 11:44:13 (49684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 11:44:18 (49684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 11:44:18 (49684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-10 11:44:25 (49684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.000158 main     Log opened 2025-10-10T11:44:24.073890000Z
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.000256 main     OS Product: Linux
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.000287 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.000368 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.000399 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.000400 main     Process ID: 1263
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.000400 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 11:44:25 (49684): Guest Log: 00:00:00.001163 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 11:44:25 (49684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 11:44:25 (49684): Guest Log: [INFO] Mounting shared directory
2025-10-10 11:44:26 (49684): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 11:44:28 (49684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 11:44:28 (49684): Guest Log: [INFO] Detected branch: prod
2025-10-10 11:44:28 (49684): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 11:44:28 (49684): Guest Log: Copying input files
2025-10-10 11:44:30 (49684): Guest Log: Copied input files into RunAtlas.
2025-10-10 11:44:30 (49684): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 11:44:30 (49684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 11:44:30 (49684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 11:44:30 (49684): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 11:44:35 (49684): Guest Log: 00:00:10.012438 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 752 597 000ns (GuestNow=1 760 111 075 833 847 000 ns GuestLast=1 760 096 664 081 250 000 ns fSetTimeLastLoop=true )
2025-10-10 11:45:27 (49684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 11:45:27 (49684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 11:45:27 (49684): Guest Log: 2.6.3.0 1541 0 32168 151553 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 11:45:28 (49684): Guest Log: copied the webapp to /var/www
2025-10-10 11:45:28 (49684): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-10 11:45:28 (49684): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-10 11:45:28 (49684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 11:45:28 (49684): Guest Log:  *** Starting ATLAS job. (PandaID=6828363168 taskID=46376905) ***
2025-10-10 13:25:07 (49684): Status Report: Elapsed Time: '6000.430784'
2025-10-10 13:25:07 (49684): Status Report: CPU Time: '11407.484375'
2025-10-10 15:08:53 (49684): Status Report: Elapsed Time: '12001.185144'
2025-10-10 15:08:53 (49684): Status Report: CPU Time: '23542.296875'
2025-10-10 16:54:29 (49684): Status Report: Elapsed Time: '18001.185144'
2025-10-10 16:54:29 (49684): Status Report: CPU Time: '35806.828125'
2025-10-10 17:14:22 (49684): VM state change detected. (old = 'running', new = 'paused')
2025-10-10 18:13:10 (49684): VM state change detected. (old = 'paused', new = 'running')
2025-10-10 18:13:17 (49684): Guest Log: 05:30:04.465183 timesync vgsvcTimeSyncWorker: Radical host time change: 3 537 272 000 000ns (HostNow=1 760 134 397 383 000 000 ns HostLast=1 760 130 860 111 000 000 ns)
2025-10-10 18:13:27 (49684): Guest Log: 05:30:14.474580 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 537 106 181 000ns (GuestNow=1 760 134 407 392 458 000 ns GuestLast=1 760 130 870 286 277 000 ns fSetTimeLastLoop=true )
2025-10-10 19:28:21 (49684): Guest Log:  *** Job finished ***
2025-10-10 19:28:21 (49684): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:15,998 | INFO     | all workflow threads have been joined
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:15,998 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:15,998 | INFO     | traces error code: 0
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:15,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,543 | INFO     | PID=5916 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,545 | INFO     | found 0 job(s) in 20 queues
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,545 | INFO     | [monitor] control thread has ended
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,649 [wrapper] ==== pilot stdout END ====
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,654 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,658 [wrapper] pilotpid: 5916
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,663 [wrapper] Pilot exit status: 0
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,710 [wrapper] pandaids: 6828363168
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,740 [wrapper] cleanup supervisor_pilot 31035 5917
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,745 [wrapper] Test setup, not cleaning
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,752 [wrapper] apfmon messages muted
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,757 [wrapper] ==== wrapper stdout END ====
2025-10-10 19:28:21 (49684): Guest Log: 2025-10-10 23:28:17,762 [wrapper] ==== wrapper stderr END ====
2025-10-10 19:28:21 (49684): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 19:28:21 (49684): Guest Log:     "exeErrorCode": 0,
2025-10-10 19:28:21 (49684): Guest Log:     "exeErrorDiag": "",
2025-10-10 19:28:21 (49684): Guest Log:     "pilotErrorCode": 0,
2025-10-10 19:28:21 (49684): Guest Log:     "pilotErrorDiag": "",
2025-10-10 19:28:21 (49684): Guest Log:  *** Listing of results directory ***
2025-10-10 19:28:21 (49684): Guest Log: total 186760
2025-10-10 19:28:21 (49684): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  3 14:40 pilot3.tar.gz
2025-10-10 19:28:21 (49684): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  3 14:59 queuedata.json
2025-10-10 19:28:21 (49684): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  3 14:59 runpilot2-wrapper.sh
2025-10-10 19:28:21 (49684): Guest Log: -rwxr-xr-x. 1 atlas atlas      9014 Oct 10 15:44 init_data.xml
2025-10-10 19:28:21 (49684): Guest Log: -rwxr-xr-x. 1 atlas atlas    565601 Oct 10 15:44 input.tar.gz
2025-10-10 19:28:21 (49684): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 15:44 start_atlas.sh
2025-10-10 19:28:21 (49684): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 15:44 EVNT.46376901._001494.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 19:28:21 (49684): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Oct 10 15:45 pandaJob.out
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas    975533 Oct 10 15:45 agis_schedconf.cvmfs.json
2025-10-10 19:28:21 (49684): Guest Log: drwx------. 4 atlas atlas      4096 Oct 10 15:45 pilot3
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas 179855750 Oct 10 23:27 HITS.46376905._043180.pool.root.1
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 10 23:27 memory_monitor_summary.json
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 23:27 agis_ddmendpoints.agis.ALL.json
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas    488786 Oct 10 23:27 log.46376905._043180.job.log.tgz.1
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas      7821 Oct 10 23:27 heartbeat.json
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas        97 Oct 10 23:28 pilot_heartbeat.json
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas       744 Oct 10 23:28 pilotlog.txt
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas   3290291 Oct 10 23:28 log.46376905._043180.job.log.1
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 23:28 output.list
2025-10-10 19:28:21 (49684): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 23:28 runtime_log
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas   3799040 Oct 10 23:28 result.tar.gz
2025-10-10 19:28:21 (49684): Guest Log: -rw-r--r--. 1 atlas atlas      8622 Oct 10 23:28 runtime_log.err
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas       652 Oct 10 23:28 PXfLDm7QwO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfgBMDmZo0zan.diag
2025-10-10 19:28:21 (49684): Guest Log: Looking for outputfile HITS.46376905._043180.pool.root.1
2025-10-10 19:28:21 (49684): Guest Log: HITS file was successfully produced
2025-10-10 19:28:21 (49684): Guest Log: -rw-------. 1 atlas atlas 179855750 Oct 10 23:27 /home/atlas/RunAtlas/HITS.46376905._043180.pool.root.1
2025-10-10 19:28:22 (49684): Guest Log: Successfully finished the ATLAS job!
2025-10-10 19:28:22 (49684): Guest Log: Copying the results back to the shared directory!
2025-10-10 19:28:22 (49684): Guest Log:  *** Contents of shared directory: ***
2025-10-10 19:28:22 (49684): Guest Log: total 390364
2025-10-10 19:28:22 (49684): Guest Log: -rwxrwxrwx. 1 root root 215471652 Oct 10 15:43 ATLAS.root_0
2025-10-10 19:28:22 (49684): Guest Log: -rwxrwxrwx. 1 root root 179855750 Oct 10 23:28 HITS.pool.root.1
2025-10-10 19:28:22 (49684): Guest Log: -rwxrwxrwx. 1 root root      9014 Oct 10 15:43 init_data.xml
2025-10-10 19:28:22 (49684): Guest Log: -rwxrwxrwx. 1 root root    565601 Oct 10 11:08 input.tar.gz
2025-10-10 19:28:22 (49684): Guest Log: -rwxrwxrwx. 1 root root   3799040 Oct 10 23:28 result.tar.gz
2025-10-10 19:28:22 (49684): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 11:08 start_atlas.sh
2025-10-10 19:28:22 (49684): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 19:28:22 (49684): VM Completion File Detected.
2025-10-10 19:28:22 (49684): Powering off VM.
2025-10-10 19:28:25 (49684): Successfully stopped VM.
2025-10-10 19:28:25 (49684): Deregistering VM. (boinc_bd71edacf5fcc87b, slot#8)
2025-10-10 19:28:25 (49684): Removing network bandwidth throttle group from VM.
2025-10-10 19:28:25 (49684): Removing VM from VirtualBox.
2025-10-10 19:28:30 (49684): called boinc_finish(0)

</stderr_txt>
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