Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:57:12 (259830): wrapper (7.7.26015): starting
06:57:12 (259830): wrapper: running run_atlas (--nthreads 11)
[2025-10-10 06:57:12] Arguments: --nthreads 11
[2025-10-10 06:57:12] Threads: 11
[2025-10-10 06:57:12] Checking for CVMFS
[2025-10-10 06:57:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:57:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:57:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:57:13] 2.13.2.0 2216807 126271 422836 151543 0 196 32030595 40960001 6562 16776704 30 247023298 99.705 199364204 21780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 06:57:13] CVMFS is ok
[2025-10-10 06:57:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:57:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:57:13] Further information can be found at the LHC@home message board.
[2025-10-10 06:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:57:13] Checking for apptainer binary...
[2025-10-10 06:57:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:57:13] Running /usr/bin/apptainer --version
[2025-10-10 06:57:13] apptainer version 1.4.3-1.el9
[2025-10-10 06:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:57:13] c7-11-11.aglt2.org
[2025-10-10 06:57:13] apptainer works
[2025-10-10 06:57:13] Set ATHENA_PROC_NUMBER=11
[2025-10-10 06:57:13] Set ATHENA_CORE_NUMBER=11
[2025-10-10 06:57:13] Starting ATLAS job with PandaID=6837379038
[2025-10-10 06:57:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:45:47]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:45:47]  replicas=None
[2025-10-10 07:45:47]  scope=mc23_13p6TeV
[2025-10-10 07:45:47]  status=None
[2025-10-10 07:45:47]  status_code=0
[2025-10-10 07:45:47]  storage_token=
[2025-10-10 07:45:47]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6837379038/log.46676269._030177.job.log.tgz.1
[2025-10-10 07:45:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/29/log.46676269._030177.job.log.tgz.1
[2025-10-10 07:45:47]  workdir=None
[2025-10-10 07:45:47] ]
[2025-10-10 07:45:47] 2025-10-10 11:45:10,004 | INFO     | transferring file log.46676269._030177.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6837379038/log.46676269._030177.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 07:45:47] 2025-10-10 11:45:10,004 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6837379038/log.46676269._030177.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._030177.job
[2025-10-10 07:45:47] 2025-10-10 11:45:10,027 | INFO     | adding to output.list: log.46676269._030177.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/29/log.46676269._030177.job.log.tg
[2025-10-10 07:45:47] 2025-10-10 11:45:10,028 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 07:45:47] 2025-10-10 11:45:10,028 | INFO     | summary of transferred files:
[2025-10-10 07:45:47] 2025-10-10 11:45:10,028 | INFO     |  -- lfn=log.46676269._030177.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 07:45:47] 2025-10-10 11:45:10,029 | INFO     | stage-out finished correctly
[2025-10-10 07:45:47] 2025-10-10 11:45:11,140 | INFO     | time since job start (2867s) is within the limit (172800.0s)
[2025-10-10 07:45:47] 2025-10-10 11:45:11,505 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 07:45:47] 2025-10-10 11:45:11,580 | INFO     | job 6837379038 has state=finished
[2025-10-10 07:45:47] 2025-10-10 11:45:11,580 | INFO     | preparing for final server update for job 6837379038 in state='finished'
[2025-10-10 07:45:47] 2025-10-10 11:45:11,581 | INFO     | this job has now completed (state=finished)
[2025-10-10 07:45:47] 2025-10-10 11:45:11,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 07:45:47] 2025-10-10 11:45:11,581 | INFO     | log transfer has been attempted: DONE
[2025-10-10 07:45:47] 2025-10-10 11:45:11,581 | INFO     | job 6837379038 has finished - writing final server update
[2025-10-10 07:45:47] 2025-10-10 11:45:11,581 | INFO     | total number of processed events: 400 (read)
[2025-10-10 07:45:47] 2025-10-10 11:45:11,582 | INFO     | executing command: lscpu
[2025-10-10 07:45:47] 2025-10-10 11:45:11,645 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 07:45:47] 2025-10-10 11:45:13,144 | INFO     | time since job start (2869s) is within the limit (172800.0s)
[2025-10-10 07:45:47] 2025-10-10 11:45:14,437 | INFO     | PID=263515 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:45:47] 2025-10-10 11:45:14,437 | INFO     | .. there are 8 such processes running
[2025-10-10 07:45:47] 2025-10-10 11:45:14,781 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 07:45:47] 2025-10-10 11:45:14,784 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3174.9796093749987
[2025-10-10 07:45:47] 2025-10-10 11:45:14,791 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6837379038/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:45:47] 2025-10-10 11:45:14,791 | INFO     | extracted standard info from prmon json
[2025-10-10 07:45:47] 2025-10-10 11:45:14,791 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:45:47] 2025-10-10 11:45:14,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:45:47] 2025-10-10 11:45:14,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:45:47] 2025-10-10 11:45:14,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:45:47] 2025-10-10 11:45:14,792 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:45:47] 2025-10-10 11:45:14,792 | INFO     | sum of square deviations: 19832930.0
[2025-10-10 07:45:47] 2025-10-10 11:45:14,792 | INFO     | sum of deviations: -58866189.5
[2025-10-10 07:45:47] 2025-10-10 11:45:14,792 | INFO     | mean x: 1760095365.5
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | mean y: 2401602.625
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | -- intersect: 5226546866.264551
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | intersect: 5226546866.264551
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | chi2: 0.00789925793032455
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | -- intersect: 5226546866.264551
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | current memory leak: -2.97 B/s (using 40 data points, chi2=0.01)
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | could have reported an average CPU frequency of 3212 MHz (5 samples)
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | ..............................
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . Timing measurements:
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . get job = 0 s
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . initial setup = 2 s
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . payload setup = 6 s
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . stage-in = 0 s
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . payload execution = 2839 s
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . stage-out = 0 s
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | . log creation = 0 s
[2025-10-10 07:45:47] 2025-10-10 11:45:14,793 | INFO     | ..............................
[2025-10-10 07:45:47] 2025-10-10 11:45:15,235 | INFO     | 
[2025-10-10 07:45:47] 2025-10-10 11:45:15,235 | INFO     | job summary report
[2025-10-10 07:45:47] 2025-10-10 11:45:15,235 | INFO     | --------------------------------------------------
[2025-10-10 07:45:47] 2025-10-10 11:45:15,235 | INFO     | PanDA job id: 6837379038
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | task id: 46676269
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | errors: (none)
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | pilot state: finished 
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | transexitcode: 0
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | exeerrorcode: 0
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | exeerrordiag: 
[2025-10-10 07:45:47] 2025-10-10 11:45:15,236 | INFO     | exitcode: 0
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | exitmsg: OK
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | cpuconsumptiontime: 28510 s
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | nevents: 400
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | neventsw: 0
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | pid: 270475
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | pgrp: 270475
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | corecount: 11
[2025-10-10 07:45:47] 2025-10-10 11:45:15,237 | INFO     | event service: False
[2025-10-10 07:45:47] 2025-10-10 11:45:15,238 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 2849: 2374616, 2850: 2383614, 2852: 2383670, 2855: 2384024}
[2025-10-10 07:45:47] 2025-10-10 11:45:15,238 | INFO     | --------------------------------------------------
[2025-10-10 07:45:47] 2025-10-10 11:45:15,238 | INFO     | 
[2025-10-10 07:45:47] 2025-10-10 11:45:15,238 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-10 07:45:47] 2025-10-10 11:45:15,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:45:47] 2025-10-10 11:45:15,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,258 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:45:47] 2025-10-10 11:45:15,258 | INFO     | job 6837379038 has completed (purged errors)
[2025-10-10 07:45:47] 2025-10-10 11:45:15,258 | INFO     | overall cleanup function is called
[2025-10-10 07:45:47] 2025-10-10 11:45:15,474 | WARNING  | process 270475 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 07:45:47] 2025-10-10 11:45:15,628 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:45:47] 2025-10-10 11:45:15,815 | INFO     | number of running child processes to parent process 270475: 1
[2025-10-10 07:45:47] 2025-10-10 11:45:15,816 | INFO     | maximum number of monitored processes: 6
[2025-10-10 07:45:47] 2025-10-10 11:45:15,816 | INFO     | aborting job monitoring since job object (job id=6837379038) has expired
[2025-10-10 07:45:47] 2025-10-10 11:45:16,263 | INFO     | --- collectZombieJob: --- 10, [270475]
[2025-10-10 07:45:47] 2025-10-10 11:45:16,263 | INFO     | zombie collector waiting for pid 270475
[2025-10-10 07:45:47] 2025-10-10 11:45:16,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:45:47] 2025-10-10 11:45:16,263 | INFO     | collected zombie processes
[2025-10-10 07:45:47] 2025-10-10 11:45:16,263 | INFO     | will attempt to kill all subprocesses of pid=270475
[2025-10-10 07:45:47] 2025-10-10 11:45:16,552 | INFO     | process IDs to be killed: [270475] (in reverse order)
[2025-10-10 07:45:47] 2025-10-10 11:45:16,649 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:45:47] 2025-10-10 11:45:16,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:45:47] 2025-10-10 11:45:16,661 | INFO     | did not find any defunct processes belonging to 270475
[2025-10-10 07:45:47] 2025-10-10 11:45:16,670 | INFO     | did not find any defunct processes belonging to 270475
[2025-10-10 07:45:47] 2025-10-10 11:45:16,670 | INFO     | ready for new job
[2025-10-10 07:45:47] 2025-10-10 11:45:16,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:45:47] 2025-10-10 11:45:16,672 | INFO     | ***************************************
[2025-10-10 07:45:47] 2025-10-10 11:45:16,672 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:45:47] 2025-10-10 11:45:16,672 | INFO     | ***************************************
[2025-10-10 07:45:47] 2025-10-10 11:45:16,672 | INFO     | 
[2025-10-10 07:45:47] 2025-10-10 11:45:16,689 | INFO     | architecture information:
[2025-10-10 07:45:47] 2025-10-10 11:45:16,689 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:45:47] 2025-10-10 11:45:16,705 | INFO     | cat /etc/os-release:
[2025-10-10 07:45:47] NAME="CentOS Linux"
[2025-10-10 07:45:47] VERSION="7 (Core)"
[2025-10-10 07:45:47] ID="centos"
[2025-10-10 07:45:47] ID_LIKE="rhel fedora"
[2025-10-10 07:45:47] VERSION_ID="7"
[2025-10-10 07:45:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:45:47] ANSI_COLOR="0;31"
[2025-10-10 07:45:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:45:47] HOME_URL="https://www.centos.org/"
[2025-10-10 07:45:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:45:47] 
[2025-10-10 07:45:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:45:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:45:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:45:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:45:47] 
[2025-10-10 07:45:47] 2025-10-10 11:45:16,705 | INFO     | ***************************************
[2025-10-10 07:45:47] 2025-10-10 11:45:17,208 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-10 07:45:47] 2025-10-10 11:45:17,226 | INFO     | sufficient remaining disk space (83600867328 B)
[2025-10-10 07:45:47] 2025-10-10 11:45:17,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:45:47] 2025-10-10 11:45:17,227 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:45:47] 2025-10-10 11:45:17,227 | INFO     | update_server=False
[2025-10-10 07:45:47] 2025-10-10 11:45:17,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:45:47] 2025-10-10 11:45:17,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:45:47] 2025-10-10 11:45:17,228 | INFO     | aborting loop
[2025-10-10 07:45:47] 2025-10-10 11:45:17,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:45:47] 2025-10-10 11:45:17,697 | INFO     | all data control threads have been joined
[2025-10-10 07:45:47] 2025-10-10 11:45:17,922 | INFO     | all job control threads have been joined
[2025-10-10 07:45:47] 2025-10-10 11:45:18,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:45:47] 2025-10-10 11:45:18,121 | INFO     | all payload control threads have been joined
[2025-10-10 07:45:47] 2025-10-10 11:45:18,232 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:18,233 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:18,279 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:18,703 | INFO     | [data] control thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:18,890 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:18,923 | INFO     | [job] control thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:19,126 | INFO     | [payload] control thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:19,339 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:19,539 | INFO     | [job] validate thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:19,546 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:19,574 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:19,688 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:19,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:45:47] 2025-10-10 11:45:20,123 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:20,851 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:21,592 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:26,495 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:45:47] 2025-10-10 11:45:27,332 | INFO     | job.realtimelogging is not enabled
[2025-10-10 07:45:47] 2025-10-10 11:45:28,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:45:47] 2025-10-10 11:45:28,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140720146364224)>', '<ExcThread(monitor, started 140719301850880)>']
[2025-10-10 07:45:47] 2025-10-10 11:45:33,969 | INFO     | all workflow threads have been joined
[2025-10-10 07:45:47] 2025-10-10 11:45:33,969 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:45:47] 2025-10-10 11:45:33,970 | INFO     | traces error code: 0
[2025-10-10 07:45:47] 2025-10-10 11:45:33,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:45:47] 2025-10-10 11:45:46,801 | INFO     | PID=263515 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:45:47] 2025-10-10 11:45:46,801 | INFO     | .. there are 8 such processes running
[2025-10-10 07:45:47] 2025-10-10 11:45:46,801 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:45:47] 2025-10-10 11:45:46,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:45:47] 2025-10-10 11:45:46,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:45:47] 2025-10-10 11:45:46,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:45:47] 2025-10-10 11:45:46,802 | INFO     | [monitor] control thread has ended
[2025-10-10 07:45:47] 2025-10-10 11:45:46,873 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:45:47] 2025-10-10 11:45:46,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:45:47] 2025-10-10 11:45:46,880 [wrapper] pilotpid: 263515
[2025-10-10 07:45:47] 2025-10-10 11:45:46,883 [wrapper] Pilot exit status: 0
[2025-10-10 07:45:47] 2025-10-10 11:45:46,894 [wrapper] pandaids: 6837379038
[2025-10-10 07:45:47] 2025-10-10 11:45:46,967 [wrapper] cleanup supervisor_pilot  405894 263516
[2025-10-10 07:45:47] 2025-10-10 11:45:46,971 [wrapper] Test setup, not cleaning
[2025-10-10 07:45:47] 2025-10-10 11:45:46,973 [wrapper] apfmon messages muted
[2025-10-10 07:45:47] 2025-10-10 11:45:46,977 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:45:47] 2025-10-10 11:45:46,979 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:45:47]  *** Error codes and diagnostics ***
[2025-10-10 07:45:47]     "exeErrorCode": 0,
[2025-10-10 07:45:47]     "exeErrorDiag": "",
[2025-10-10 07:45:47]     "pilotErrorCode": 0,
[2025-10-10 07:45:47]     "pilotErrorDiag": "",
[2025-10-10 07:45:47]  *** Listing of results directory ***
[2025-10-10 07:45:47] total 406324
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 21:33 pilot3.tar.gz
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 21:57 queuedata.json
[2025-10-10 07:45:47] -rwx------. 1 boincer umatlas     36292 Oct  9 21:57 runpilot2-wrapper.sh
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:45:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:57 run_atlas
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:57 job.xml
[2025-10-10 07:45:47] -rw-r--r--. 2 boincer umatlas 220622452 Oct 10 06:57 EVNT.46676267._001231.pool.root.1
[2025-10-10 07:45:47] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 06:57 input.tar.gz
[2025-10-10 07:45:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:57 start_atlas.sh
[2025-10-10 07:45:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:57 shared
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:57 boinc_lockfile
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 06:57 pandaJob.out
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas    975528 Oct 10 06:57 agis_schedconf.cvmfs.json
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas   1560580 Oct 10 06:57 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:45:47] drwx------. 5 boincer umatlas      4096 Oct 10 06:57 pilot3
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas      6899 Oct 10 07:38 init_data.xml
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas 189975797 Oct 10 07:44 HITS.46676269._030177.pool.root.1
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas       529 Oct 10 07:44 boinc_task_state.xml
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas      1024 Oct 10 07:45 memory_monitor_summary.json
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas    347981 Oct 10 07:45 log.46676269._030177.job.log.tgz.1
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas      7770 Oct 10 07:45 heartbeat.json
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 07:45 boinc_mmap_file
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas        27 Oct 10 07:45 wrapper_checkpoint.txt
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas       821 Oct 10 07:45 pilotlog.txt
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas        95 Oct 10 07:45 pilot_heartbeat.json
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas    444538 Oct 10 07:45 log.46676269._030177.job.log.1
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas       357 Oct 10 07:45 output.list
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas       620 Oct 10 07:45 runtime_log
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas    808960 Oct 10 07:45 result.tar.gz
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas      8705 Oct 10 07:45 runtime_log.err
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas       651 Oct 10 07:45 aXqMDm4YHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9ybNDmj7lX0m.diag
[2025-10-10 07:45:47] -rw-r--r--. 1 boincer umatlas     21866 Oct 10 07:45 stderr.txt
[2025-10-10 07:45:47] HITS file was successfully produced:
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas 189975797 Oct 10 07:44 shared/HITS.pool.root.1
[2025-10-10 07:45:47]  *** Contents of shared directory: ***
[2025-10-10 07:45:47] total 402348
[2025-10-10 07:45:47] -rw-r--r--. 2 boincer umatlas 220622452 Oct 10 06:57 ATLAS.root_0
[2025-10-10 07:45:47] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 06:57 input.tar.gz
[2025-10-10 07:45:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:57 start_atlas.sh
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas 189975797 Oct 10 07:44 HITS.pool.root.1
[2025-10-10 07:45:47] -rw-------. 1 boincer umatlas    808960 Oct 10 07:45 result.tar.gz
07:45:49 (259830): run_atlas exited; CPU time 28524.641149
07:45:49 (259830): called boinc_finish(0)

</stderr_txt>
]]>

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