Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:53:08 (226020): wrapper (7.7.26015): starting
13:53:08 (226020): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 13:53:08] Arguments: --nthreads 12
[2025-10-10 13:53:08] Threads: 12
[2025-10-10 13:53:08] Checking for CVMFS
[2025-10-10 13:53:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 13:53:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 13:53:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 13:53:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 13:53:08] 2.13.2.0 2625769 1039 51988 151547 2 188 3991209 4096000 854 130560 0 5048693 99.999 33238 613 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 13:53:08] CVMFS is ok
[2025-10-10 13:53:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 13:53:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 13:53:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 13:53:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 13:53:08] Further information can be found at the LHC@home message board.
[2025-10-10 13:53:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 13:53:08] Checking for apptainer binary...
[2025-10-10 13:53:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 13:53:08] Running /usr/bin/apptainer --version
[2025-10-10 13:53:08] apptainer version 1.4.3
[2025-10-10 13:53:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 13:53:08] test-run
[2025-10-10 13:53:08] apptainer works
[2025-10-10 13:53:08] Set ATHENA_PROC_NUMBER=12
[2025-10-10 13:53:08] Set ATHENA_CORE_NUMBER=12
[2025-10-10 13:53:08] Starting ATLAS job with PandaID=6837378677
[2025-10-10 13:53:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 14:16:21]  *** The last 200 lines of the pilot log: ***
[2025-10-10 14:16:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-10-10 14:16:21]  is_altstaged=None
[2025-10-10 14:16:21]  is_tar=False
[2025-10-10 14:16:21]  lfn=log.46676269._029866.job.log.tgz.1
[2025-10-10 14:16:21]  mtime=0
[2025-10-10 14:16:21]  protocol_id=None
[2025-10-10 14:16:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 14:16:21]  replicas=None
[2025-10-10 14:16:21]  scope=mc23_13p6TeV
[2025-10-10 14:16:21]  status=None
[2025-10-10 14:16:21]  status_code=0
[2025-10-10 14:16:21]  storage_token=
[2025-10-10 14:16:21]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6837378677/log.46676269._029866.job.log.tgz.1
[2025-10-10 14:16:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/84/log.46676269._029866.job.log.tgz.1
[2025-10-10 14:16:21]  workdir=None
[2025-10-10 14:16:21] ]
[2025-10-10 14:16:21] 2025-10-10 14:15:28,371 | INFO     | transferring file log.46676269._029866.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6837378677/log.46676269._029866.job.log.tgz.1 to /var/lib/boinc
[2025-10-10 14:16:21] 2025-10-10 14:15:28,371 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6837378677/log.46676269._029866.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-10 14:16:21] 2025-10-10 14:15:28,376 | INFO     | adding to output.list: log.46676269._029866.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/84/log.46676269._029866.job.log.tg
[2025-10-10 14:16:21] 2025-10-10 14:15:28,376 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 14:16:21] 2025-10-10 14:15:28,376 | INFO     | summary of transferred files:
[2025-10-10 14:16:21] 2025-10-10 14:15:28,376 | INFO     |  -- lfn=log.46676269._029866.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 14:16:21] 2025-10-10 14:15:28,376 | INFO     | stage-out finished correctly
[2025-10-10 14:16:21] 2025-10-10 14:15:28,392 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 14:16:21] 2025-10-10 14:15:28,430 | INFO     | time since job start (1336s) is within the limit (172800.0s)
[2025-10-10 14:16:21] 2025-10-10 14:15:28,623 | INFO     | job 6837378677 has state=finished
[2025-10-10 14:16:21] 2025-10-10 14:15:28,623 | INFO     | preparing for final server update for job 6837378677 in state='finished'
[2025-10-10 14:16:21] 2025-10-10 14:15:28,623 | INFO     | this job has now completed (state=finished)
[2025-10-10 14:16:21] 2025-10-10 14:15:28,623 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 14:16:21] 2025-10-10 14:15:28,623 | INFO     | log transfer has been attempted: DONE
[2025-10-10 14:16:21] 2025-10-10 14:15:28,623 | INFO     | job 6837378677 has finished - writing final server update
[2025-10-10 14:16:21] 2025-10-10 14:15:28,624 | INFO     | total number of processed events: 400 (read)
[2025-10-10 14:16:21] 2025-10-10 14:15:28,624 | INFO     | executing command: lscpu
[2025-10-10 14:16:21] 2025-10-10 14:15:28,630 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 14:16:21] 2025-10-10 14:15:29,402 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 14:16:21] 2025-10-10 14:15:29,402 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.979999999998
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6837378677/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | INFO     | extracted standard info from prmon json
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | INFO     | fitting pss+swap vs Time
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | INFO     | sum of square deviations: 1041880.0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,403 | INFO     | sum of deviations: -44389456.0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | mean x: 1760105139.0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | mean y: 2706981.2666666666
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | -- intersect: 74992254360.0573
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | intersect: 74992254360.0573
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | chi2: 0.030666933123552686
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | -- intersect: 74992254360.0573
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | current memory leak: -42.61 B/s (using 15 data points, chi2=0.03)
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | ..............................
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . Timing measurements:
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . get job = 0 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . initial setup = 2 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . payload setup = 1 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . stage-in = 0 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . payload execution = 1319 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . stage-out = 0 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | . log creation = 0 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,404 | INFO     | ..............................
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | 
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | job summary report
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | --------------------------------------------------
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | PanDA job id: 6837378677
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | task id: 46676269
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | errors: (none)
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | pilot state: finished 
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | transexitcode: 0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | exeerrorcode: 0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | exeerrordiag: 
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | exitcode: 0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | exitmsg: OK
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | cpuconsumptiontime: 11646 s
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | nevents: 400
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | neventsw: 0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | pid: 236521
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | pgrp: 236521
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | corecount: 12
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | event service: False
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | sizes: {0: 2348691, 1: 2349152, 11: 2349152, 1323: 2373893, 1324: 2382960, 1325: 2383098}
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | --------------------------------------------------
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | 
[2025-10-10 14:16:21] 2025-10-10 14:15:29,422 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | job 6837378677 has completed (purged errors)
[2025-10-10 14:16:21] 2025-10-10 14:15:29,427 | INFO     | overall cleanup function is called
[2025-10-10 14:16:21] 2025-10-10 14:15:30,433 | INFO     | --- collectZombieJob: --- 10, [236521]
[2025-10-10 14:16:21] 2025-10-10 14:15:30,433 | INFO     | zombie collector waiting for pid 236521
[2025-10-10 14:16:21] 2025-10-10 14:15:30,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 14:16:21] 2025-10-10 14:15:30,433 | INFO     | collected zombie processes
[2025-10-10 14:16:21] 2025-10-10 14:15:30,433 | INFO     | will attempt to kill all subprocesses of pid=236521
[2025-10-10 14:16:21] 2025-10-10 14:15:30,447 | INFO     | process IDs to be killed: [236521] (in reverse order)
[2025-10-10 14:16:21] 2025-10-10 14:15:30,457 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 14:16:21] 2025-10-10 14:15:30,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 14:16:21] 2025-10-10 14:15:30,458 | INFO     | did not find any defunct processes belonging to 236521
[2025-10-10 14:16:21] 2025-10-10 14:15:30,458 | INFO     | did not find any defunct processes belonging to 236521
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | ready for new job
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | ***************************************
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | ***************************************
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | 
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | pilot is running in a VM
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | architecture information:
[2025-10-10 14:16:21] 2025-10-10 14:15:30,459 | INFO     | executing command: cat /etc/os-release
[2025-10-10 14:16:21] 2025-10-10 14:15:30,462 | INFO     | cat /etc/os-release:
[2025-10-10 14:16:21] NAME="CentOS Linux"
[2025-10-10 14:16:21] VERSION="7 (Core)"
[2025-10-10 14:16:21] ID="centos"
[2025-10-10 14:16:21] ID_LIKE="rhel fedora"
[2025-10-10 14:16:21] VERSION_ID="7"
[2025-10-10 14:16:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 14:16:21] ANSI_COLOR="0;31"
[2025-10-10 14:16:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 14:16:21] HOME_URL="https://www.centos.org/"
[2025-10-10 14:16:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 14:16:21] 
[2025-10-10 14:16:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 14:16:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 14:16:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 14:16:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 14:16:21] 
[2025-10-10 14:16:21] 2025-10-10 14:15:30,462 | INFO     | ***************************************
[2025-10-10 14:16:21] 2025-10-10 14:15:30,964 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-10 14:16:21] 2025-10-10 14:15:30,968 | INFO     | sufficient remaining disk space (23393730560 B)
[2025-10-10 14:16:21] 2025-10-10 14:15:30,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 14:16:21] 2025-10-10 14:15:30,969 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 14:16:21] 2025-10-10 14:15:30,969 | INFO     | update_server=False
[2025-10-10 14:16:21] 2025-10-10 14:15:30,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 14:16:21] 2025-10-10 14:15:30,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:16:21] 2025-10-10 14:15:30,969 | INFO     | aborting loop
[2025-10-10 14:16:21] 2025-10-10 14:15:30,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:16:21] 2025-10-10 14:15:30,978 | INFO     | all payload control threads have been joined
[2025-10-10 14:16:21] 2025-10-10 14:15:31,139 | INFO     | job.realtimelogging is not enabled
[2025-10-10 14:16:21] 2025-10-10 14:15:31,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 14:16:21] 2025-10-10 14:15:31,974 | INFO     | [job] retrieve thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:31,974 | INFO     | [job] job monitor thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:31,974 | INFO     | [job] queue monitor thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:31,983 | INFO     | [payload] control thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:32,049 | INFO     | all data control threads have been joined
[2025-10-10 14:16:21] 2025-10-10 14:15:32,121 | INFO     | [data] copytool_in thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:32,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:32,237 | INFO     | all job control threads have been joined
[2025-10-10 14:16:21] 2025-10-10 14:15:32,424 | INFO     | [payload] validate_post thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:32,605 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:32,668 | INFO     | [job] validate thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:32,742 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:33,054 | INFO     | [data] control thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:33,242 | INFO     | [job] control thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:33,385 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:33,402 | INFO     | [data] copytool_out thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:33,524 | INFO     | [payload] failed_post thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:15:34,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 14:16:21] 2025-10-10 14:15:38,423 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 14:16:21] 2025-10-10 14:16:01,529 | INFO     | PID=229873 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 14:16:21] 2025-10-10 14:16:01,529 | INFO     | .. there are 2 such processes running
[2025-10-10 14:16:21] 2025-10-10 14:16:01,529 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 14:16:21] 2025-10-10 14:16:01,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 14:16:21] 2025-10-10 14:16:01,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 14:16:21] 2025-10-10 14:16:14,167 | INFO     | [monitor] cgroup control has ended
[2025-10-10 14:16:21] 2025-10-10 14:16:16,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124930560538432)>', '<ExcThread(monitor, started 124929794111232)>']
[2025-10-10 14:16:21] 2025-10-10 14:16:16,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 14:16:21] 2025-10-10 14:16:16,604 | INFO     | [monitor] control thread has ended
[2025-10-10 14:16:21] 2025-10-10 14:16:21,184 | INFO     | all workflow threads have been joined
[2025-10-10 14:16:21] 2025-10-10 14:16:21,184 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 14:16:21] 2025-10-10 14:16:21,184 | INFO     | traces error code: 0
[2025-10-10 14:16:21] 2025-10-10 14:16:21,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 14:16:21] 2025-10-10 14:16:21,209 [wrapper] ==== pilot stdout END ====
[2025-10-10 14:16:21] 2025-10-10 14:16:21,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 14:16:21] 2025-10-10 14:16:21,211 [wrapper] pilotpid: 229873
[2025-10-10 14:16:21] 2025-10-10 14:16:21,212 [wrapper] Pilot exit status: 0
[2025-10-10 14:16:21] 2025-10-10 14:16:21,214 [wrapper] pandaids: 6837378677
[2025-10-10 14:16:21] 2025-10-10 14:16:21,220 [wrapper] cleanup supervisor_pilot  243589 229874
[2025-10-10 14:16:21] 2025-10-10 14:16:21,221 [wrapper] Test setup, not cleaning
[2025-10-10 14:16:21] 2025-10-10 14:16:21,221 [wrapper] apfmon messages muted
[2025-10-10 14:16:21] 2025-10-10 14:16:21,222 [wrapper] ==== wrapper stdout END ====
[2025-10-10 14:16:21] 2025-10-10 14:16:21,222 [wrapper] ==== wrapper stderr END ====
[2025-10-10 14:16:21]  *** Error codes and diagnostics ***
[2025-10-10 14:16:21]     "exeErrorCode": 0,
[2025-10-10 14:16:21]     "exeErrorDiag": "",
[2025-10-10 14:16:21]     "pilotErrorCode": 0,
[2025-10-10 14:16:21]     "pilotErrorDiag": "",
[2025-10-10 14:16:21]  *** Listing of results directory ***
[2025-10-10 14:16:21] total 402012
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc    557409 Oct 10 01:33 pilot3.tar.gz
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc      5112 Oct 10 01:40 queuedata.json
[2025-10-10 14:16:21] -rwx------ 1 boinc boinc     36292 Oct 10 01:40 runpilot2-wrapper.sh
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc       100 Oct 10 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 14:16:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 13:53 run_atlas
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc       105 Oct 10 13:53 job.xml
[2025-10-10 14:16:21] -rw-r--r-- 2 boinc boinc     15120 Oct 10 13:53 start_atlas.sh
[2025-10-10 14:16:21] drwxrwx--x 2 boinc boinc      4096 Oct 10 13:53 shared
[2025-10-10 14:16:21] -rw-r--r-- 2 boinc boinc    569677 Oct 10 13:53 input.tar.gz
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc      6938 Oct 10 13:53 init_data.xml
[2025-10-10 14:16:21] -rw-r--r-- 2 boinc boinc 220919758 Oct 10 13:53 EVNT.46676267._001219.pool.root.1
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc         0 Oct 10 13:53 boinc_lockfile
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc      2549 Oct 10 13:53 pandaJob.out
[2025-10-10 14:16:21] -rw------- 1 boinc boinc    975525 Oct 10 13:53 agis_schedconf.cvmfs.json
[2025-10-10 14:16:21] -rw------- 1 boinc boinc   1560580 Oct 10 13:53 agis_ddmendpoints.agis.ALL.json
[2025-10-10 14:16:21] drwx------ 5 boinc boinc      4096 Oct 10 13:53 pilot3
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc       529 Oct 10 14:15 boinc_task_state.xml
[2025-10-10 14:16:21] -rw------- 1 boinc boinc 185703224 Oct 10 14:15 HITS.46676269._029866.pool.root.1
[2025-10-10 14:16:21] -rw------- 1 boinc boinc        95 Oct 10 14:15 pilot_heartbeat.json
[2025-10-10 14:16:21] -rw------- 1 boinc boinc      1021 Oct 10 14:15 memory_monitor_summary.json
[2025-10-10 14:16:21] -rw------- 1 boinc boinc    323661 Oct 10 14:15 log.46676269._029866.job.log.tgz.1
[2025-10-10 14:16:21] -rw------- 1 boinc boinc      7740 Oct 10 14:15 heartbeat.json
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc      8192 Oct 10 14:16 boinc_mmap_file
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc        27 Oct 10 14:16 wrapper_checkpoint.txt
[2025-10-10 14:16:21] -rw------- 1 boinc boinc      4963 Oct 10 14:16 pilotlog.txt
[2025-10-10 14:16:21] -rw------- 1 boinc boinc    240778 Oct 10 14:16 log.46676269._029866.job.log.1
[2025-10-10 14:16:21] -rw------- 1 boinc boinc       357 Oct 10 14:16 output.list
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc       620 Oct 10 14:16 runtime_log
[2025-10-10 14:16:21] -rw------- 1 boinc boinc    583680 Oct 10 14:16 result.tar.gz
[2025-10-10 14:16:21] -rw------- 1 boinc boinc       641 Oct 10 14:16 uxYKDmmIHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7wbNDmyL6WPo.diag
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc      8762 Oct 10 14:16 runtime_log.err
[2025-10-10 14:16:21] -rw-r--r-- 1 boinc boinc     21500 Oct 10 14:16 stderr.txt
[2025-10-10 14:16:21] HITS file was successfully produced:
[2025-10-10 14:16:21] -rw------- 1 boinc boinc 185703224 Oct 10 14:15 shared/HITS.pool.root.1
[2025-10-10 14:16:21]  *** Contents of shared directory: ***
[2025-10-10 14:16:21] total 398252
[2025-10-10 14:16:21] -rw-r--r-- 2 boinc boinc     15120 Oct 10 13:53 start_atlas.sh
[2025-10-10 14:16:21] -rw-r--r-- 2 boinc boinc    569677 Oct 10 13:53 input.tar.gz
[2025-10-10 14:16:21] -rw-r--r-- 2 boinc boinc 220919758 Oct 10 13:53 ATLAS.root_0
[2025-10-10 14:16:21] -rw------- 1 boinc boinc 185703224 Oct 10 14:15 HITS.pool.root.1
[2025-10-10 14:16:21] -rw------- 1 boinc boinc    583680 Oct 10 14:16 result.tar.gz
14:16:22 (226020): run_atlas exited; CPU time 11649.759120
14:16:22 (226020): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN