Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:09:44 (2917767): wrapper (7.7.26015): starting
07:09:44 (2917767): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 07:09:44] Arguments: --nthreads 8
[2025-10-10 07:09:44] Threads: 8
[2025-10-10 07:09:44] Checking for CVMFS
[2025-10-10 07:09:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 07:09:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 07:09:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 07:09:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 07:09:48] 2.13.2.0 3608313 126286 293744 151543 2 756 21473275 32935937 24696 16776704 0 173952816 99.617 188833197 29445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 07:09:48] CVMFS is ok
[2025-10-10 07:09:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 07:09:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 07:09:48] Further information can be found at the LHC@home message board.
[2025-10-10 07:09:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 07:09:48] Checking for apptainer binary...
[2025-10-10 07:09:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 07:09:48] Running /usr/bin/apptainer --version
[2025-10-10 07:09:48] apptainer version 1.4.3-1.el9
[2025-10-10 07:09:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 07:09:48] c6-6-39-3.aglt2.org
[2025-10-10 07:09:48] apptainer works
[2025-10-10 07:09:48] Set ATHENA_PROC_NUMBER=8
[2025-10-10 07:09:48] Set ATHENA_CORE_NUMBER=8
[2025-10-10 07:09:49] Starting ATLAS job with PandaID=6837448853
[2025-10-10 07:09:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 14:51:58]  *** The last 200 lines of the pilot log: ***
[2025-10-10 14:51:58] 2025-10-10 18:51:09,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 14:51:58] 2025-10-10 18:51:09,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 14:51:58] 2025-10-10 18:51:09,924 | INFO     | time since job start (27612s) is within the limit (172800.0s)
[2025-10-10 14:51:58] 2025-10-10 18:51:09,971 | INFO     | fitting pss+swap vs Time
[2025-10-10 14:51:58] 2025-10-10 18:51:09,972 | INFO     | sum of square deviations: 28067849545.118103
[2025-10-10 14:51:58] 2025-10-10 18:51:10,018 | INFO     | sum of deviations: 75246286558.9887
[2025-10-10 14:51:58] 2025-10-10 18:51:10,019 | INFO     | mean x: 1760108497.583519
[2025-10-10 14:51:58] 2025-10-10 18:51:10,019 | INFO     | mean y: 2434711.1336302897
[2025-10-10 14:51:58] 2025-10-10 18:51:10,019 | INFO     | -- intersect: -4716189285.022013
[2025-10-10 14:51:58] 2025-10-10 18:51:10,019 | INFO     | intersect: -4716189285.022013
[2025-10-10 14:51:58] 2025-10-10 18:51:10,061 | INFO     | chi2: 3.996575175858183
[2025-10-10 14:51:58] 2025-10-10 18:51:10,062 | INFO     | sum of square deviations: 27140637648.396305
[2025-10-10 14:51:58] 2025-10-10 18:51:10,133 | INFO     | sum of deviations: 137948825358.40546
[2025-10-10 14:51:58] 2025-10-10 18:51:10,134 | INFO     | mean x: 1760108345.09009
[2025-10-10 14:51:58] 2025-10-10 18:51:10,134 | INFO     | mean y: 2444962.364864865
[2025-10-10 14:51:58] 2025-10-10 18:51:10,134 | INFO     | -- intersect: -8943729473.704502
[2025-10-10 14:51:58] 2025-10-10 18:51:10,134 | INFO     | intersect: -8943729473.704502
[2025-10-10 14:51:58] 2025-10-10 18:51:10,135 | INFO     | chi2: 2.4147431014244845
[2025-10-10 14:51:58] 2025-10-10 18:51:10,135 | INFO     | current chi2=2.4147431014244845 (change=39.579690230499224 %)
[2025-10-10 14:51:58] 2025-10-10 18:51:10,167 | INFO     | sum of square deviations: 26234023500.01351
[2025-10-10 14:51:58] 2025-10-10 18:51:10,204 | INFO     | sum of deviations: 140225010545.2211
[2025-10-10 14:51:58] 2025-10-10 18:51:10,204 | INFO     | mean x: 1760108192.592255
[2025-10-10 14:51:58] 2025-10-10 18:51:10,204 | INFO     | mean y: 2445344.2414578586
[2025-10-10 14:51:58] 2025-10-10 18:51:10,204 | INFO     | -- intersect: -9405611710.630507
[2025-10-10 14:51:58] 2025-10-10 18:51:10,204 | INFO     | intersect: -9405611710.630507
[2025-10-10 14:51:58] 2025-10-10 18:51:10,205 | INFO     | chi2: 2.4098975562576492
[2025-10-10 14:51:58] 2025-10-10 18:51:10,205 | INFO     | current chi2=2.4098975562576492 (change=0.20066503819709752 %)
[2025-10-10 14:51:58] 2025-10-10 18:51:10,205 | INFO     | right removable region: 438
[2025-10-10 14:51:58] 2025-10-10 18:51:10,206 | INFO     | sum of square deviations: 27140477828.396317
[2025-10-10 14:51:58] 2025-10-10 18:51:10,244 | INFO     | sum of deviations: -25103566865.108105
[2025-10-10 14:51:58] 2025-10-10 18:51:10,245 | INFO     | mean x: 1760108650.09009
[2025-10-10 14:51:58] 2025-10-10 18:51:10,245 | INFO     | mean y: 2451169.4527027025
[2025-10-10 14:51:58] 2025-10-10 18:51:10,245 | INFO     | -- intersect: 1630462491.3890548
[2025-10-10 14:51:58] 2025-10-10 18:51:10,245 | INFO     | intersect: 1630462491.3890548
[2025-10-10 14:51:58] 2025-10-10 18:51:10,245 | INFO     | chi2: 1.8301816760233098
[2025-10-10 14:51:58] 2025-10-10 18:51:10,246 | INFO     | current chi2=1.8301816760233098 (change=54.20624921360786 %)
[2025-10-10 14:51:58] 2025-10-10 18:51:10,246 | INFO     | sum of square deviations: 26233811708.01351
[2025-10-10 14:51:58] 2025-10-10 18:51:10,286 | INFO     | sum of deviations: -52420173621.90889
[2025-10-10 14:51:58] 2025-10-10 18:51:10,286 | INFO     | mean x: 1760108802.592255
[2025-10-10 14:51:58] 2025-10-10 18:51:10,324 | INFO     | mean y: 2455751.6150341686
[2025-10-10 14:51:58] 2025-10-10 18:51:10,324 | INFO     | -- intersect: 3519489801.118118
[2025-10-10 14:51:58] 2025-10-10 18:51:10,324 | INFO     | intersect: 3519489801.118118
[2025-10-10 14:51:58] 2025-10-10 18:51:10,325 | INFO     | chi2: 1.667657061371416
[2025-10-10 14:51:58] 2025-10-10 18:51:10,325 | INFO     | current chi2=1.667657061371416 (change=8.880244883941455 %)
[2025-10-10 14:51:58] 2025-10-10 18:51:10,325 | INFO     | left removable region: 20
[2025-10-10 14:51:58] 2025-10-10 18:51:10,326 | INFO     | sum of square deviations: 22646361224.978462
[2025-10-10 14:51:58] 2025-10-10 18:51:10,403 | INFO     | sum of deviations: 14544652098.24404
[2025-10-10 14:51:58] 2025-10-10 18:51:10,403 | INFO     | mean x: 1760108772.098086
[2025-10-10 14:51:58] 2025-10-10 18:51:10,403 | INFO     | mean y: 2467107.5550239235
[2025-10-10 14:51:58] 2025-10-10 18:51:10,403 | INFO     | -- intersect: -1127964818.8331199
[2025-10-10 14:51:58] 2025-10-10 18:51:10,403 | INFO     | intersect: -1127964818.8331199
[2025-10-10 14:51:58] 2025-10-10 18:51:10,404 | INFO     | chi2: 0.02892033932825377
[2025-10-10 14:51:58] 2025-10-10 18:51:10,404 | INFO     | -- intersect: -1127964818.8331199
[2025-10-10 14:51:58] 2025-10-10 18:51:10,404 | INFO     | current memory leak: 0.64 B/s (using 418 data points, chi2=0.03)
[2025-10-10 14:51:58] 2025-10-10 18:51:10,405 | INFO     | could have reported an average CPU frequency of 2891 MHz (18 samples)
[2025-10-10 14:51:58] 2025-10-10 18:51:10,405 | INFO     | ..............................
[2025-10-10 14:51:58] 2025-10-10 18:51:10,406 | INFO     | . Timing measurements:
[2025-10-10 14:51:58] 2025-10-10 18:51:10,406 | INFO     | . get job = 0 s
[2025-10-10 14:51:58] 2025-10-10 18:51:10,406 | INFO     | . initial setup = 5 s
[2025-10-10 14:51:58] 2025-10-10 18:51:10,406 | INFO     | . payload setup = 52 s
[2025-10-10 14:51:58] 2025-10-10 18:51:10,406 | INFO     | . stage-in = 0 s
[2025-10-10 14:51:58] 2025-10-10 18:51:10,406 | INFO     | . payload execution = 27407 s
[2025-10-10 14:51:58] 2025-10-10 18:51:10,406 | INFO     | . stage-out = 11 s
[2025-10-10 14:51:58] 2025-10-10 18:51:10,467 | INFO     | . log creation = 2 s
[2025-10-10 14:51:58] 2025-10-10 18:51:10,467 | INFO     | ..............................
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | 
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | job summary report
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | --------------------------------------------------
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | PanDA job id: 6837448853
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | task id: 46676269
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | errors: (none)
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | pilot state: finished 
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | transexitcode: 0
[2025-10-10 14:51:58] 2025-10-10 18:51:11,341 | INFO     | exeerrorcode: 0
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | exeerrordiag: 
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | exitcode: 0
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | exitmsg: OK
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | cpuconsumptiontime: 43527 s
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | nevents: 400
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | neventsw: 0
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | pid: 2934457
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | pgrp: 2934457
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | corecount: 8
[2025-10-10 14:51:58] 2025-10-10 18:51:11,342 | INFO     | event service: False
[2025-10-10 14:51:58] 2025-10-10 18:51:11,343 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 25: 2348969, 37: 2349415, 48: 2349415, 27465: 2385827, 27466: 2385826, 27479: 2394880, 27480: 2394936, 275
[2025-10-10 14:51:58] 2025-10-10 18:51:11,343 | INFO     | --------------------------------------------------
[2025-10-10 14:51:58] 2025-10-10 18:51:11,343 | INFO     | 
[2025-10-10 14:51:58] 2025-10-10 18:51:11,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 14:51:58] 2025-10-10 18:51:11,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 14:51:58] 2025-10-10 18:51:11,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 14:51:58] 2025-10-10 18:51:11,549 | INFO     | job 6837448853 has completed (purged errors)
[2025-10-10 14:51:58] 2025-10-10 18:51:11,549 | INFO     | overall cleanup function is called
[2025-10-10 14:51:58] 2025-10-10 18:51:12,561 | INFO     | --- collectZombieJob: --- 10, [2934457]
[2025-10-10 14:51:58] 2025-10-10 18:51:12,562 | INFO     | zombie collector waiting for pid 2934457
[2025-10-10 14:51:58] 2025-10-10 18:51:12,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 14:51:58] 2025-10-10 18:51:12,562 | INFO     | collected zombie processes
[2025-10-10 14:51:58] 2025-10-10 18:51:12,562 | INFO     | will attempt to kill all subprocesses of pid=2934457
[2025-10-10 14:51:58] 2025-10-10 18:51:16,312 | INFO     | process IDs to be killed: [2934457] (in reverse order)
[2025-10-10 14:51:58] 2025-10-10 18:51:17,897 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 14:51:58] 2025-10-10 18:51:17,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 14:51:58] 2025-10-10 18:51:18,093 | INFO     | did not find any defunct processes belonging to 2934457
[2025-10-10 14:51:58] 2025-10-10 18:51:18,255 | INFO     | did not find any defunct processes belonging to 2934457
[2025-10-10 14:51:58] 2025-10-10 18:51:18,256 | INFO     | ready for new job
[2025-10-10 14:51:58] 2025-10-10 18:51:18,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 14:51:58] 2025-10-10 18:51:18,294 | INFO     | ***************************************
[2025-10-10 14:51:58] 2025-10-10 18:51:18,294 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 14:51:58] 2025-10-10 18:51:18,294 | INFO     | ***************************************
[2025-10-10 14:51:58] 2025-10-10 18:51:18,294 | INFO     | 
[2025-10-10 14:51:58] 2025-10-10 18:51:18,321 | INFO     | architecture information:
[2025-10-10 14:51:58] 2025-10-10 18:51:18,389 | INFO     | executing command: cat /etc/os-release
[2025-10-10 14:51:58] 2025-10-10 18:51:18,572 | INFO     | cat /etc/os-release:
[2025-10-10 14:51:58] NAME="CentOS Linux"
[2025-10-10 14:51:58] VERSION="7 (Core)"
[2025-10-10 14:51:58] ID="centos"
[2025-10-10 14:51:58] ID_LIKE="rhel fedora"
[2025-10-10 14:51:58] VERSION_ID="7"
[2025-10-10 14:51:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 14:51:58] ANSI_COLOR="0;31"
[2025-10-10 14:51:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 14:51:58] HOME_URL="https://www.centos.org/"
[2025-10-10 14:51:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 14:51:58] 
[2025-10-10 14:51:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 14:51:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 14:51:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 14:51:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 14:51:58] 
[2025-10-10 14:51:58] 2025-10-10 18:51:18,572 | INFO     | ***************************************
[2025-10-10 14:51:58] 2025-10-10 18:51:19,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 14:51:58] 2025-10-10 18:51:19,260 | INFO     | sufficient remaining disk space (75523686400 B)
[2025-10-10 14:51:58] 2025-10-10 18:51:19,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 14:51:58] 2025-10-10 18:51:19,261 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 14:51:58] 2025-10-10 18:51:19,261 | INFO     | update_server=False
[2025-10-10 14:51:58] 2025-10-10 18:51:19,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 14:51:58] 2025-10-10 18:51:19,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 14:51:58] 2025-10-10 18:51:19,281 | INFO     | all data control threads have been joined
[2025-10-10 14:51:58] 2025-10-10 18:51:19,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 14:51:58] 2025-10-10 18:51:19,839 | INFO     | all job control threads have been joined
[2025-10-10 14:51:58] 2025-10-10 18:51:19,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:51:58] 2025-10-10 18:51:19,884 | INFO     | aborting loop
[2025-10-10 14:51:58] 2025-10-10 18:51:20,268 | INFO     | [job] retrieve thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,288 | INFO     | [data] control thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,311 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:51:58] 2025-10-10 18:51:20,488 | INFO     | all payload control threads have been joined
[2025-10-10 14:51:58] 2025-10-10 18:51:20,556 | INFO     | [payload] failed_post thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,562 | INFO     | [payload] validate_post thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,608 | INFO     | [job] validate thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,845 | INFO     | [job] control thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,867 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:20,889 | INFO     | [job] job monitor thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:21,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:21,463 | INFO     | [job] queue monitor thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:21,494 | INFO     | [payload] control thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:21,569 | INFO     | [data] copytool_out thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:21,686 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:21,769 | INFO     | [data] copytool_in thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:23,289 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 14:51:58] 2025-10-10 18:51:47,273 | INFO     | PID=2925721 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 14:51:58] 2025-10-10 18:51:47,274 | INFO     | .. there are 29 such processes running
[2025-10-10 14:51:58] 2025-10-10 18:51:47,275 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 14:51:58] 2025-10-10 18:51:47,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 14:51:58] 2025-10-10 18:51:47,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 14:51:58] 2025-10-10 18:51:48,119 | INFO     | [monitor] cgroup control has ended
[2025-10-10 14:51:58] 2025-10-10 18:51:49,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624507414336)>', '<ExcThread(monitor, started 140623856260864)>']
[2025-10-10 14:51:58] 2025-10-10 18:51:50,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 14:51:58] 2025-10-10 18:51:50,332 | INFO     | [monitor] control thread has ended
[2025-10-10 14:51:58] 2025-10-10 18:51:54,386 | INFO     | all workflow threads have been joined
[2025-10-10 14:51:58] 2025-10-10 18:51:54,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 14:51:58] 2025-10-10 18:51:54,388 | INFO     | traces error code: 0
[2025-10-10 14:51:58] 2025-10-10 18:51:54,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 14:51:58] 2025-10-10 18:51:56,499 [wrapper] ==== pilot stdout END ====
[2025-10-10 14:51:58] 2025-10-10 18:51:56,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 14:51:58] 2025-10-10 18:51:56,618 [wrapper] pilotpid: 2925721
[2025-10-10 14:51:58] 2025-10-10 18:51:56,639 [wrapper] Pilot exit status: 0
[2025-10-10 14:51:58] 2025-10-10 18:51:56,761 [wrapper] pandaids: 6837448853
[2025-10-10 14:51:58] 2025-10-10 18:51:57,179 [wrapper] cleanup supervisor_pilot 4183071 2925722
[2025-10-10 14:51:58] 2025-10-10 18:51:57,207 [wrapper] Test setup, not cleaning
[2025-10-10 14:51:58] 2025-10-10 18:51:57,210 [wrapper] apfmon messages muted
[2025-10-10 14:51:58] 2025-10-10 18:51:57,258 [wrapper] ==== wrapper stdout END ====
[2025-10-10 14:51:58] 2025-10-10 18:51:57,302 [wrapper] ==== wrapper stderr END ====
[2025-10-10 14:51:58]  *** Error codes and diagnostics ***
[2025-10-10 14:51:58]     "exeErrorCode": 0,
[2025-10-10 14:51:58]     "exeErrorDiag": "",
[2025-10-10 14:51:58]     "pilotErrorCode": 0,
[2025-10-10 14:51:58]     "pilotErrorDiag": "",
[2025-10-10 14:51:58]  *** Listing of results directory ***
[2025-10-10 14:51:58] total 421056
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 00:44 pilot3.tar.gz
[2025-10-10 14:51:58] -rwx------. 1 boincer umatlas     36292 Oct 10 01:13 runpilot2-wrapper.sh
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 01:13 queuedata.json
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas       100 Oct 10 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 14:51:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 07:09 run_atlas
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas       105 Oct 10 07:09 job.xml
[2025-10-10 14:51:58] -rw-r--r--. 2 boincer umatlas 221069340 Oct 10 07:09 EVNT.46676267._001336.pool.root.1
[2025-10-10 14:51:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 07:09 start_atlas.sh
[2025-10-10 14:51:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 07:09 shared
[2025-10-10 14:51:58] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 07:09 input.tar.gz
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas         0 Oct 10 07:09 boinc_lockfile
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 07:09 pandaJob.out
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas    975528 Oct 10 07:10 agis_schedconf.cvmfs.json
[2025-10-10 14:51:58] drwx------. 5 boincer umatlas      4096 Oct 10 07:10 pilot3
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas 198507138 Oct 10 14:47 HITS.46676269._032803.pool.root.1
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas       531 Oct 10 14:47 boinc_task_state.xml
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas      6843 Oct 10 14:47 init_data.xml
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas      1041 Oct 10 14:50 memory_monitor_summary.json
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas   1560580 Oct 10 14:50 agis_ddmendpoints.agis.ALL.json
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas    602682 Oct 10 14:50 log.46676269._032803.job.log.tgz.1
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas      7829 Oct 10 14:51 heartbeat.json
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas        95 Oct 10 14:51 pilot_heartbeat.json
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas      4824 Oct 10 14:51 pilotlog.txt
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 14:51 boinc_mmap_file
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas        28 Oct 10 14:51 wrapper_checkpoint.txt
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas   3235505 Oct 10 14:51 log.46676269._032803.job.log.1
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas       357 Oct 10 14:51 output.list
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas       620 Oct 10 14:51 runtime_log
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas   3860480 Oct 10 14:51 result.tar.gz
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas      8709 Oct 10 14:51 runtime_log.err
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas       657 Oct 10 14:51 0i1LDmYcKR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7OcNDm7dbWem.diag
[2025-10-10 14:51:58] -rw-r--r--. 1 boincer umatlas     21053 Oct 10 14:51 stderr.txt
[2025-10-10 14:51:58] HITS file was successfully produced:
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas 198507138 Oct 10 14:47 shared/HITS.pool.root.1
[2025-10-10 14:51:58]  *** Contents of shared directory: ***
[2025-10-10 14:51:58] total 414100
[2025-10-10 14:51:58] -rw-r--r--. 2 boincer umatlas 221069340 Oct 10 07:09 ATLAS.root_0
[2025-10-10 14:51:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 07:09 start_atlas.sh
[2025-10-10 14:51:58] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 07:09 input.tar.gz
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas 198507138 Oct 10 14:47 HITS.pool.root.1
[2025-10-10 14:51:58] -rw-------. 1 boincer umatlas   3860480 Oct 10 14:51 result.tar.gz
14:51:59 (2917767): run_atlas exited; CPU time 44360.292466
14:51:59 (2917767): called boinc_finish(0)

</stderr_txt>
]]>

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