Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:54 (410081): wrapper (7.7.26015): starting
06:56:54 (410081): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 06:56:54] Arguments: --nthreads 8
[2025-10-10 06:56:54] Threads: 8
[2025-10-10 06:56:54] Checking for CVMFS
[2025-10-10 06:56:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:56:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:56:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:56:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:56:57] 2.13.2.0 4308 12720 177100 151543 1 455 36664550 39288833 10463 16776704 0 12139712 99.683 8699104 30344 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 06:56:57] CVMFS is ok
[2025-10-10 06:56:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:56:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:56:58] Further information can be found at the LHC@home message board.
[2025-10-10 06:56:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:56:58] Checking for apptainer binary...
[2025-10-10 06:56:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:56:58] Running /usr/bin/apptainer --version
[2025-10-10 06:56:58] apptainer version 1.4.3-1.el9
[2025-10-10 06:56:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:56:58] c-211-32.aglt2.org
[2025-10-10 06:56:58] apptainer works
[2025-10-10 06:56:58] Set ATHENA_PROC_NUMBER=8
[2025-10-10 06:56:58] Set ATHENA_CORE_NUMBER=8
[2025-10-10 06:56:59] Starting ATLAS job with PandaID=6837448762
[2025-10-10 06:56:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:40:05 (410081): BOINC client no longer exists - exiting
17:40:05 (410081): timer handler: client dead, exiting
17:48:28 (1274442): wrapper (7.7.26015): starting
17:48:28 (1274442): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 17:48:28] Arguments: --nthreads 10
[2025-10-10 17:48:28] Threads: 10
[2025-10-10 17:48:28] This job has been restarted, cleaning up previous attempt
[2025-10-10 17:48:28] Checking for CVMFS
[2025-10-10 17:48:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:48:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:48:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:48:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:48:29] 2.13.2.0 4308 13372 173688 151562 2 331 37373745 39288833 6861 16776704 0 12625374 99.695 8756906 30384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 17:48:29] CVMFS is ok
[2025-10-10 17:48:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:48:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:48:29] Further information can be found at the LHC@home message board.
[2025-10-10 17:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:48:29] Checking for apptainer binary...
[2025-10-10 17:48:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:48:29] Running /usr/bin/apptainer --version
[2025-10-10 17:48:29] apptainer version 1.4.3-1.el9
[2025-10-10 17:48:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:48:29] c-211-32.aglt2.org
[2025-10-10 17:48:29] apptainer works
[2025-10-10 17:48:29] Set ATHENA_PROC_NUMBER=10
[2025-10-10 17:48:29] Set ATHENA_CORE_NUMBER=10
[2025-10-10 17:48:29] Starting ATLAS job with PandaID=6837448762
[2025-10-10 17:48:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 04:07:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 04:07:09] 2025-10-11 08:06:11,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 04:07:09] 2025-10-11 08:06:11,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 04:07:09] 2025-10-11 08:06:11,734 | INFO     | fitting pss+swap vs Time
[2025-10-11 04:07:09] 2025-10-11 08:06:11,749 | INFO     | sum of square deviations: 69008507785.43887
[2025-10-11 04:07:09] 2025-10-11 08:06:11,819 | INFO     | sum of deviations: 98849754050.42236
[2025-10-11 04:07:09] 2025-10-11 08:06:11,819 | INFO     | mean x: 1760151406.7986798
[2025-10-11 04:07:09] 2025-10-11 08:06:11,820 | INFO     | mean y: 2590158.5280528055
[2025-10-11 04:07:09] 2025-10-11 08:06:11,820 | INFO     | -- intersect: -2518700900.17047
[2025-10-11 04:07:09] 2025-10-11 08:06:11,820 | INFO     | intersect: -2518700900.17047
[2025-10-11 04:07:09] 2025-10-11 08:06:11,821 | INFO     | chi2: 3.131472911529584
[2025-10-11 04:07:09] 2025-10-11 08:06:11,822 | INFO     | sum of square deviations: 67314660724.05373
[2025-10-11 04:07:09] 2025-10-11 08:06:11,851 | INFO     | sum of deviations: 178124238116.4325
[2025-10-11 04:07:09] 2025-10-11 08:06:11,851 | INFO     | mean x: 1760151254.3078203
[2025-10-11 04:07:09] 2025-10-11 08:06:11,851 | INFO     | mean y: 2597259.3760399334
[2025-10-11 04:07:09] 2025-10-11 08:06:11,851 | INFO     | -- intersect: -4655015180.037632
[2025-10-11 04:07:09] 2025-10-11 08:06:11,860 | INFO     | intersect: -4655015180.037632
[2025-10-11 04:07:09] 2025-10-11 08:06:11,861 | INFO     | chi2: 1.7193536185445308
[2025-10-11 04:07:09] 2025-10-11 08:06:11,861 | INFO     | current chi2=1.7193536185445308 (change=45.094411891153676 %)
[2025-10-11 04:07:09] 2025-10-11 08:06:11,862 | INFO     | sum of square deviations: 65648657812.953125
[2025-10-11 04:07:09] 2025-10-11 08:06:11,894 | INFO     | sum of deviations: 176483317440.35577
[2025-10-11 04:07:09] 2025-10-11 08:06:11,894 | INFO     | mean x: 1760151101.8120806
[2025-10-11 04:07:09] 2025-10-11 08:06:11,894 | INFO     | mean y: 2597109.172818792
[2025-10-11 04:07:09] 2025-10-11 08:06:11,894 | INFO     | -- intersect: -4729217919.386707
[2025-10-11 04:07:09] 2025-10-11 08:06:11,895 | INFO     | intersect: -4729217919.386707
[2025-10-11 04:07:09] 2025-10-11 08:06:11,895 | INFO     | chi2: 1.7192870789949473
[2025-10-11 04:07:09] 2025-10-11 08:06:11,896 | INFO     | current chi2=1.7192870789949473 (change=0.0038700328347756976 %)
[2025-10-11 04:07:09] 2025-10-11 08:06:11,896 | INFO     | right removable region: 595
[2025-10-11 04:07:09] 2025-10-11 08:06:11,905 | INFO     | sum of square deviations: 67314254220.053734
[2025-10-11 04:07:09] 2025-10-11 08:06:11,944 | INFO     | sum of deviations: -15701557103.973366
[2025-10-11 04:07:09] 2025-10-11 08:06:11,945 | INFO     | mean x: 1760151559.3078203
[2025-10-11 04:07:09] 2025-10-11 08:06:11,945 | INFO     | mean y: 2600441.65391015
[2025-10-11 04:07:09] 2025-10-11 08:06:11,945 | INFO     | -- intersect: 413169058.0686794
[2025-10-11 04:07:09] 2025-10-11 08:06:11,945 | INFO     | intersect: 413169058.0686794
[2025-10-11 04:07:09] 2025-10-11 08:06:11,950 | INFO     | chi2: 1.5436622830585731
[2025-10-11 04:07:09] 2025-10-11 08:06:11,951 | INFO     | current chi2=1.5436622830585731 (change=50.70491341709983 %)
[2025-10-11 04:07:09] 2025-10-11 08:06:11,952 | INFO     | sum of square deviations: 65647991085.69812
[2025-10-11 04:07:09] 2025-10-11 08:06:11,979 | INFO     | sum of deviations: -40736408144.91947
[2025-10-11 04:07:09] 2025-10-11 08:06:11,979 | INFO     | mean x: 1760151711.8154361
[2025-10-11 04:07:09] 2025-10-11 08:06:11,980 | INFO     | mean y: 2602730.8825503355
[2025-10-11 04:07:09] 2025-10-11 08:06:11,980 | INFO     | -- intersect: 1094825925.2814589
[2025-10-11 04:07:09] 2025-10-11 08:06:11,980 | INFO     | intersect: 1094825925.2814589
[2025-10-11 04:07:09] 2025-10-11 08:06:11,981 | INFO     | chi2: 1.4852542182811248
[2025-10-11 04:07:09] 2025-10-11 08:06:11,981 | INFO     | current chi2=1.4852542182811248 (change=3.783733360493855 %)
[2025-10-11 04:07:09] 2025-10-11 08:06:11,981 | INFO     | left removable region: 20
[2025-10-11 04:07:09] 2025-10-11 08:06:11,982 | INFO     | sum of square deviations: 58950978137.12005
[2025-10-11 04:07:09] 2025-10-11 08:06:12,031 | INFO     | sum of deviations: 30109692991.04001
[2025-10-11 04:07:09] 2025-10-11 08:06:12,031 | INFO     | mean x: 1760151681.32
[2025-10-11 04:07:09] 2025-10-11 08:06:12,036 | INFO     | mean y: 2610733.135652174
[2025-10-11 04:07:09] 2025-10-11 08:06:12,036 | INFO     | -- intersect: -896401096.9808142
[2025-10-11 04:07:09] 2025-10-11 08:06:12,036 | INFO     | intersect: -896401096.9808142
[2025-10-11 04:07:09] 2025-10-11 08:06:12,037 | INFO     | chi2: 0.01994889085658452
[2025-10-11 04:07:09] 2025-10-11 08:06:12,038 | INFO     | -- intersect: -896401096.9808142
[2025-10-11 04:07:09] 2025-10-11 08:06:12,038 | INFO     | current memory leak: 0.51 B/s (using 575 data points, chi2=0.02)
[2025-10-11 04:07:09] 2025-10-11 08:06:12,039 | INFO     | could have reported an average CPU frequency of 2899 MHz (23 samples)
[2025-10-11 04:07:09] 2025-10-11 08:06:12,039 | INFO     | ..............................
[2025-10-11 04:07:09] 2025-10-11 08:06:12,039 | INFO     | . Timing measurements:
[2025-10-11 04:07:09] 2025-10-11 08:06:12,039 | INFO     | . get job = 0 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,043 | INFO     | . initial setup = 2 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,043 | INFO     | . payload setup = 7 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,043 | INFO     | . stage-in = 0 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,043 | INFO     | . payload execution = 36934 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,043 | INFO     | . stage-out = 20 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,044 | INFO     | . log creation = 8 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,044 | INFO     | ..............................
[2025-10-11 04:07:09] 2025-10-11 08:06:12,061 | INFO     | time since job start (37050s) is within the limit (172800.0s)
[2025-10-11 04:07:09] 2025-10-11 08:06:12,350 | INFO     | 
[2025-10-11 04:07:09] 2025-10-11 08:06:12,363 | INFO     | job summary report
[2025-10-11 04:07:09] 2025-10-11 08:06:12,363 | INFO     | --------------------------------------------------
[2025-10-11 04:07:09] 2025-10-11 08:06:12,363 | INFO     | PanDA job id: 6837448762
[2025-10-11 04:07:09] 2025-10-11 08:06:12,364 | INFO     | task id: 46676269
[2025-10-11 04:07:09] 2025-10-11 08:06:12,364 | INFO     | errors: (none)
[2025-10-11 04:07:09] 2025-10-11 08:06:12,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 04:07:09] 2025-10-11 08:06:12,364 | INFO     | pilot state: finished 
[2025-10-11 04:07:09] 2025-10-11 08:06:12,364 | INFO     | transexitcode: 0
[2025-10-11 04:07:09] 2025-10-11 08:06:12,364 | INFO     | exeerrorcode: 0
[2025-10-11 04:07:09] 2025-10-11 08:06:12,364 | INFO     | exeerrordiag: 
[2025-10-11 04:07:09] 2025-10-11 08:06:12,365 | INFO     | exitcode: 0
[2025-10-11 04:07:09] 2025-10-11 08:06:12,365 | INFO     | exitmsg: OK
[2025-10-11 04:07:09] 2025-10-11 08:06:12,365 | INFO     | cpuconsumptiontime: 80400 s
[2025-10-11 04:07:09] 2025-10-11 08:06:12,365 | INFO     | nevents: 400
[2025-10-11 04:07:09] 2025-10-11 08:06:12,365 | INFO     | neventsw: 0
[2025-10-11 04:07:09] 2025-10-11 08:06:12,365 | INFO     | pid: 1301952
[2025-10-11 04:07:09] 2025-10-11 08:06:12,365 | INFO     | pgrp: 1301952
[2025-10-11 04:07:09] 2025-10-11 08:06:12,366 | INFO     | corecount: 10
[2025-10-11 04:07:09] 2025-10-11 08:06:12,366 | INFO     | event service: False
[2025-10-11 04:07:09] 2025-10-11 08:06:12,366 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 6: 2349175, 12: 2349203, 36951: 2389258, 36952: 2389385, 36977: 2398439, 36981: 2398495, 37033: 2398689}
[2025-10-11 04:07:09] 2025-10-11 08:06:12,366 | INFO     | --------------------------------------------------
[2025-10-11 04:07:09] 2025-10-11 08:06:12,366 | INFO     | 
[2025-10-11 04:07:09] 2025-10-11 08:06:12,366 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 04:07:09] 2025-10-11 08:06:12,506 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,507 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,507 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,507 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,508 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,511 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 04:07:09] 2025-10-11 08:06:12,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,511 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 04:07:09] 2025-10-11 08:06:12,511 | INFO     | job 6837448762 has completed (purged errors)
[2025-10-11 04:07:09] 2025-10-11 08:06:12,511 | INFO     | overall cleanup function is called
[2025-10-11 04:07:09] 2025-10-11 08:06:13,522 | INFO     | --- collectZombieJob: --- 10, [1301952]
[2025-10-11 04:07:09] 2025-10-11 08:06:13,522 | INFO     | zombie collector waiting for pid 1301952
[2025-10-11 04:07:09] 2025-10-11 08:06:13,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 04:07:09] 2025-10-11 08:06:13,522 | INFO     | collected zombie processes
[2025-10-11 04:07:09] 2025-10-11 08:06:13,523 | INFO     | will attempt to kill all subprocesses of pid=1301952
[2025-10-11 04:07:09] 2025-10-11 08:06:16,464 | INFO     | process IDs to be killed: [1301952] (in reverse order)
[2025-10-11 04:07:09] 2025-10-11 08:06:16,655 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 04:07:09] 2025-10-11 08:06:16,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 04:07:09] 2025-10-11 08:06:16,786 | INFO     | did not find any defunct processes belonging to 1301952
[2025-10-11 04:07:09] 2025-10-11 08:06:16,891 | INFO     | did not find any defunct processes belonging to 1301952
[2025-10-11 04:07:09] 2025-10-11 08:06:16,892 | INFO     | ready for new job
[2025-10-11 04:07:09] 2025-10-11 08:06:16,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 04:07:09] 2025-10-11 08:06:16,897 | INFO     | ***************************************
[2025-10-11 04:07:09] 2025-10-11 08:06:16,897 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 04:07:09] 2025-10-11 08:06:16,897 | INFO     | ***************************************
[2025-10-11 04:07:09] 2025-10-11 08:06:16,897 | INFO     | 
[2025-10-11 04:07:09] 2025-10-11 08:06:16,949 | INFO     | architecture information:
[2025-10-11 04:07:09] 2025-10-11 08:06:16,983 | INFO     | executing command: cat /etc/os-release
[2025-10-11 04:07:09] 2025-10-11 08:06:17,176 | INFO     | cat /etc/os-release:
[2025-10-11 04:07:09] NAME="CentOS Linux"
[2025-10-11 04:07:09] VERSION="7 (Core)"
[2025-10-11 04:07:09] ID="centos"
[2025-10-11 04:07:09] ID_LIKE="rhel fedora"
[2025-10-11 04:07:09] VERSION_ID="7"
[2025-10-11 04:07:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 04:07:09] ANSI_COLOR="0;31"
[2025-10-11 04:07:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 04:07:09] HOME_URL="https://www.centos.org/"
[2025-10-11 04:07:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 04:07:09] 
[2025-10-11 04:07:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 04:07:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 04:07:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 04:07:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 04:07:09] 
[2025-10-11 04:07:09] 2025-10-11 08:06:17,176 | INFO     | ***************************************
[2025-10-11 04:07:09] 2025-10-11 08:06:17,680 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 04:07:09] 2025-10-11 08:06:17,941 | INFO     | sufficient remaining disk space (52046069760 B)
[2025-10-11 04:07:09] 2025-10-11 08:06:17,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 04:07:09] 2025-10-11 08:06:17,942 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 04:07:09] 2025-10-11 08:06:17,942 | INFO     | update_server=False
[2025-10-11 04:07:09] 2025-10-11 08:06:17,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 04:07:09] 2025-10-11 08:06:17,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:07:09] 2025-10-11 08:06:17,972 | INFO     | all payload control threads have been joined
[2025-10-11 04:07:09] 2025-10-11 08:06:18,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 04:07:09] 2025-10-11 08:06:18,357 | INFO     | all data control threads have been joined
[2025-10-11 04:07:09] 2025-10-11 08:06:18,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:07:09] 2025-10-11 08:06:18,551 | INFO     | aborting loop
[2025-10-11 04:07:09] 2025-10-11 08:06:18,948 | INFO     | [job] retrieve thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:18,968 | INFO     | [job] queue monitor thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:18,978 | INFO     | [payload] control thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:19,119 | INFO     | [payload] failed_post thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:19,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:19,386 | INFO     | [data] control thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:19,487 | INFO     | all job control threads have been joined
[2025-10-11 04:07:09] 2025-10-11 08:06:19,558 | INFO     | [job] job monitor thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:19,907 | INFO     | [data] copytool_in thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:19,910 | INFO     | [job] validate thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:19,912 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:20,038 | INFO     | [data] copytool_out thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:20,210 | INFO     | [payload] validate_post thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:20,357 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:20,470 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:20,501 | INFO     | [job] control thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:21,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 04:07:09] 2025-10-11 08:06:25,416 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 04:07:09] 2025-10-11 08:06:56,989 | INFO     | PID=1281788 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 04:07:09] 2025-10-11 08:06:56,990 | INFO     | .. there are 9 such processes running
[2025-10-11 04:07:09] 2025-10-11 08:06:57,119 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 04:07:09] 2025-10-11 08:06:57,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 04:07:09] 2025-10-11 08:06:57,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 04:07:09] 2025-10-11 08:06:58,060 | INFO     | [monitor] cgroup control has ended
[2025-10-11 04:07:09] 2025-10-11 08:07:00,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627695179584)>', '<ExcThread(monitor, started 139627188950784)>']
[2025-10-11 04:07:09] 2025-10-11 08:07:00,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 04:07:09] 2025-10-11 08:07:00,137 | INFO     | [monitor] control thread has ended
[2025-10-11 04:07:09] 2025-10-11 08:07:05,052 | INFO     | all workflow threads have been joined
[2025-10-11 04:07:09] 2025-10-11 08:07:05,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 04:07:09] 2025-10-11 08:07:05,076 | INFO     | traces error code: 0
[2025-10-11 04:07:09] 2025-10-11 08:07:05,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 04:07:09] 2025-10-11 08:07:06,478 [wrapper] ==== pilot stdout END ====
[2025-10-11 04:07:09] 2025-10-11 08:07:06,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 04:07:09] 2025-10-11 08:07:06,599 [wrapper] pilotpid: 1281788
[2025-10-11 04:07:09] 2025-10-11 08:07:06,658 [wrapper] Pilot exit status: 0
[2025-10-11 04:07:09] 2025-10-11 08:07:06,870 [wrapper] pandaids: 6837448762 6837448762
[2025-10-11 04:07:09] 2025-10-11 08:07:07,391 [wrapper] cleanup supervisor_pilot 2182855 1281790
[2025-10-11 04:07:09] 2025-10-11 08:07:07,405 [wrapper] Test setup, not cleaning
[2025-10-11 04:07:09] 2025-10-11 08:07:07,418 [wrapper] apfmon messages muted
[2025-10-11 04:07:09] 2025-10-11 08:07:07,422 [wrapper] ==== wrapper stdout END ====
[2025-10-11 04:07:09] 2025-10-11 08:07:07,426 [wrapper] ==== wrapper stderr END ====
[2025-10-11 04:07:09]  *** Error codes and diagnostics ***
[2025-10-11 04:07:09]     "exeErrorCode": 0,
[2025-10-11 04:07:09]     "exeErrorDiag": "",
[2025-10-11 04:07:09]     "pilotErrorCode": 0,
[2025-10-11 04:07:09]     "pilotErrorDiag": "",
[2025-10-11 04:07:09]  *** Listing of results directory ***
[2025-10-11 04:07:09] total 632408
[2025-10-11 04:07:09] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 00:44 pilot3.tar.gz
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 01:03 queuedata.json
[2025-10-11 04:07:09] -rwx------. 1 boincer umatlas     36292 Oct 10 01:03 runpilot2-wrapper.sh
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 04:07:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:56 run_atlas
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:56 job.xml
[2025-10-11 04:07:09] -rw-r--r--. 3 boincer umatlas 220045013 Oct 10 06:56 EVNT.46676267._001332.pool.root.1
[2025-10-11 04:07:09] -rw-r--r--. 3 boincer umatlas 220045013 Oct 10 06:56 ATLAS.root_0
[2025-10-11 04:07:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:56 start_atlas.sh
[2025-10-11 04:07:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:56 shared
[2025-10-11 04:07:09] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 06:56 input.tar.gz
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:56 boinc_lockfile
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 17:48 pandaJob.out
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas    975517 Oct 10 17:48 agis_schedconf.cvmfs.json
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas      6526 Oct 11 03:54 init_data.xml
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas 193822585 Oct 11 04:02 HITS.46676269._032712.pool.root.1
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas       532 Oct 11 04:02 boinc_task_state.xml
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas      1042 Oct 11 04:04 memory_monitor_summary.json
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas   1560580 Oct 11 04:04 agis_ddmendpoints.agis.ALL.json
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas    748064 Oct 11 04:05 log.46676269._032712.job.log.tgz.1
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas      7821 Oct 11 04:06 heartbeat.json
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas        96 Oct 11 04:06 pilot_heartbeat.json
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas      4823 Oct 11 04:07 pilotlog.txt
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas   4140037 Oct 11 04:07 log.46676269._032712.job.log.1
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas       357 Oct 11 04:07 output.list
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas       620 Oct 11 04:07 runtime_log
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas   4904960 Oct 11 04:07 result.tar.gz
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas       783 Oct 11 04:07 uISLDmRTKR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoNcNDmt6VGbm.diag
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas      8791 Oct 11 04:07 runtime_log.err
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 04:07 boinc_mmap_file
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas     23306 Oct 11 04:07 stderr.txt
[2025-10-11 04:07:09] -rw-r--r--. 1 boincer umatlas        29 Oct 11 04:07 wrapper_checkpoint.txt
[2025-10-11 04:07:09] HITS file was successfully produced:
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas 193822585 Oct 11 04:02 shared/HITS.pool.root.1
[2025-10-11 04:07:09]  *** Contents of shared directory: ***
[2025-10-11 04:07:09] total 409540
[2025-10-11 04:07:09] -rw-r--r--. 3 boincer umatlas 220045013 Oct 10 06:56 ATLAS.root_0
[2025-10-11 04:07:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:56 start_atlas.sh
[2025-10-11 04:07:09] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 06:56 input.tar.gz
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas 193822585 Oct 11 04:02 HITS.pool.root.1
[2025-10-11 04:07:09] -rw-------. 1 boincer umatlas   4904960 Oct 11 04:07 result.tar.gz
04:07:31 (1274442): run_atlas exited; CPU time 81385.592356
04:07:31 (1274442): called boinc_finish(0)

</stderr_txt>
]]>

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