Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:25 (1877080): wrapper (7.7.26015): starting
06:56:25 (1877080): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 06:56:25] Arguments: --nthreads 8
[2025-10-10 06:56:25] Threads: 8
[2025-10-10 06:56:25] Checking for CVMFS
[2025-10-10 06:56:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:56:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:56:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:56:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:56:27] 2.13.2.0 3269412 32755 368156 151543 2 766 39813636 40960000 48676 16776704 0 406512474 99.836 174225247 37052 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 06:56:27] CVMFS is ok
[2025-10-10 06:56:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:56:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:56:27] Further information can be found at the LHC@home message board.
[2025-10-10 06:56:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:56:27] Checking for apptainer binary...
[2025-10-10 06:56:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:56:27] Running /usr/bin/apptainer --version
[2025-10-10 06:56:28] apptainer version 1.4.3-1.el9
[2025-10-10 06:56:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:56:28] c8-16-2.aglt2.org
[2025-10-10 06:56:28] apptainer works
[2025-10-10 06:56:28] Set ATHENA_PROC_NUMBER=8
[2025-10-10 06:56:28] Set ATHENA_CORE_NUMBER=8
[2025-10-10 06:56:29] Starting ATLAS job with PandaID=6837365277
[2025-10-10 06:56:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 08:14:11]  *** The last 200 lines of the pilot log: ***
[2025-10-10 08:14:11] 2025-10-10 12:13:08,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:10,668 | INFO     | time since job start (4520s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:11,440 | INFO     | monitor loop #310: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:11,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:12,675 | INFO     | time since job start (4522s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:13,970 | INFO     | monitor loop #311: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:13,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:14,682 | INFO     | time since job start (4524s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:16,509 | INFO     | monitor loop #312: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:16,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:16,689 | INFO     | time since job start (4526s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:18,705 | INFO     | time since job start (4528s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:19,014 | INFO     | monitor loop #313: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:19,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:20,714 | INFO     | time since job start (4530s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:21,556 | INFO     | monitor loop #314: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:21,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:22,751 | INFO     | time since job start (4532s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:24,061 | INFO     | monitor loop #315: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:24,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:24,773 | INFO     | time since job start (4534s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:26,568 | INFO     | monitor loop #316: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:26,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:26,780 | INFO     | time since job start (4536s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:29,078 | INFO     | monitor loop #317: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:29,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:29,480 | INFO     | PID=1898255 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 08:14:11] 2025-10-10 12:13:29,482 | INFO     | .. there are 62 such processes running
[2025-10-10 08:14:11] 2025-10-10 12:13:30,486 | INFO     | time since job start (4540s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:31,583 | INFO     | monitor loop #318: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:31,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:32,493 | INFO     | time since job start (4542s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:34,094 | INFO     | monitor loop #319: job 0:6837365277 is in state 'finished'
[2025-10-10 08:14:11] 2025-10-10 12:13:34,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:14:11] 2025-10-10 12:13:34,500 | INFO     | time since job start (4544s) is within the limit (172800.0s)
[2025-10-10 08:14:11] 2025-10-10 12:13:35,878 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 08:14:11] 2025-10-10 12:13:35,887 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.989921874994
[2025-10-10 08:14:11] 2025-10-10 12:13:35,902 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6837365277/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 08:14:11] 2025-10-10 12:13:35,902 | INFO     | extracted standard info from prmon json
[2025-10-10 08:14:11] 2025-10-10 12:13:35,902 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 08:14:11] 2025-10-10 12:13:35,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 08:14:11] 2025-10-10 12:13:35,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 08:14:11] 2025-10-10 12:13:35,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 08:14:11] 2025-10-10 12:13:35,903 | INFO     | fitting pss+swap vs Time
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | sum of square deviations: 81266640.0
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | sum of deviations: 287455973.0
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | mean x: 1760096248.5
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | mean y: 2156998.625
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | -- intersect: -6223647091.296981
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | intersect: -6223647091.296981
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | chi2: 0.02760857586560347
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | -- intersect: -6223647091.296981
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | current memory leak: 3.54 B/s (using 64 data points, chi2=0.03)
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | ..............................
[2025-10-10 08:14:11] 2025-10-10 12:13:35,904 | INFO     | . Timing measurements:
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | . get job = 0 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | . initial setup = 6 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | . payload setup = 42 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | . stage-in = 0 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | . payload execution = 4364 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | . stage-out = 3 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | . log creation = 1 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,905 | INFO     | ..............................
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | 
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | job summary report
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | --------------------------------------------------
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | PanDA job id: 6837365277
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | task id: 46676269
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | errors: (none)
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | pilot state: finished 
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | transexitcode: 0
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | exeerrorcode: 0
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | exeerrordiag: 
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | exitcode: 0
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | exitmsg: OK
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | cpuconsumptiontime: 22248 s
[2025-10-10 08:14:11] 2025-10-10 12:13:35,960 | INFO     | nevents: 400
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | neventsw: 0
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | pid: 1928884
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | pgrp: 1928884
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | corecount: 8
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | event service: False
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | sizes: {0: 2348029, 1: 2348886, 2: 2348886, 12: 2348914, 23: 2348942, 34: 2348970, 41: 2349388, 45: 2349416, 4411: 2375495, 4415: 2384495, 4416: 2384551, 4471: 238
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | --------------------------------------------------
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | 
[2025-10-10 08:14:11] 2025-10-10 12:13:35,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-10-10 08:14:11] 2025-10-10 12:13:36,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | job 6837365277 has completed (purged errors)
[2025-10-10 08:14:11] 2025-10-10 12:13:36,255 | INFO     | overall cleanup function is called
[2025-10-10 08:14:11] 2025-10-10 12:13:37,278 | INFO     | --- collectZombieJob: --- 10, [1928884]
[2025-10-10 08:14:11] 2025-10-10 12:13:37,278 | INFO     | zombie collector waiting for pid 1928884
[2025-10-10 08:14:11] 2025-10-10 12:13:37,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 08:14:11] 2025-10-10 12:13:37,278 | INFO     | collected zombie processes
[2025-10-10 08:14:11] 2025-10-10 12:13:37,278 | INFO     | will attempt to kill all subprocesses of pid=1928884
[2025-10-10 08:14:11] 2025-10-10 12:13:39,093 | INFO     | process IDs to be killed: [1928884] (in reverse order)
[2025-10-10 08:14:11] 2025-10-10 12:13:39,618 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 08:14:11] 2025-10-10 12:13:39,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 08:14:11] 2025-10-10 12:13:39,778 | INFO     | did not find any defunct processes belonging to 1928884
[2025-10-10 08:14:11] 2025-10-10 12:13:39,845 | INFO     | did not find any defunct processes belonging to 1928884
[2025-10-10 08:14:11] 2025-10-10 12:13:39,845 | INFO     | ready for new job
[2025-10-10 08:14:11] 2025-10-10 12:13:39,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 08:14:11] 2025-10-10 12:13:39,855 | INFO     | ***************************************
[2025-10-10 08:14:11] 2025-10-10 12:13:39,855 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 08:14:11] 2025-10-10 12:13:39,855 | INFO     | ***************************************
[2025-10-10 08:14:11] 2025-10-10 12:13:39,855 | INFO     | 
[2025-10-10 08:14:11] 2025-10-10 12:13:39,902 | INFO     | architecture information:
[2025-10-10 08:14:11] 2025-10-10 12:13:39,949 | INFO     | executing command: cat /etc/os-release
[2025-10-10 08:14:11] 2025-10-10 12:13:40,118 | INFO     | cat /etc/os-release:
[2025-10-10 08:14:11] NAME="CentOS Linux"
[2025-10-10 08:14:11] VERSION="7 (Core)"
[2025-10-10 08:14:11] ID="centos"
[2025-10-10 08:14:11] ID_LIKE="rhel fedora"
[2025-10-10 08:14:11] VERSION_ID="7"
[2025-10-10 08:14:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 08:14:11] ANSI_COLOR="0;31"
[2025-10-10 08:14:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 08:14:11] HOME_URL="https://www.centos.org/"
[2025-10-10 08:14:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 08:14:11] 
[2025-10-10 08:14:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 08:14:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 08:14:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 08:14:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 08:14:11] 
[2025-10-10 08:14:11] 2025-10-10 12:13:40,118 | INFO     | ***************************************
[2025-10-10 08:14:11] 2025-10-10 12:13:40,624 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-10-10 08:14:11] 2025-10-10 12:13:40,750 | INFO     | sufficient remaining disk space (167170277376 B)
[2025-10-10 08:14:11] 2025-10-10 12:13:40,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 08:14:11] 2025-10-10 12:13:40,751 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 08:14:11] 2025-10-10 12:13:40,751 | INFO     | update_server=False
[2025-10-10 08:14:11] 2025-10-10 12:13:40,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 08:14:11] 2025-10-10 12:13:40,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:14:11] 2025-10-10 12:13:40,751 | INFO     | aborting loop
[2025-10-10 08:14:11] 2025-10-10 12:13:40,755 | INFO     | all job control threads have been joined
[2025-10-10 08:14:11] 2025-10-10 12:13:40,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 08:14:11] 2025-10-10 12:13:40,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:14:11] 2025-10-10 12:13:41,012 | INFO     | all payload control threads have been joined
[2025-10-10 08:14:11] 2025-10-10 12:13:41,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 08:14:11] 2025-10-10 12:13:41,669 | INFO     | all data control threads have been joined
[2025-10-10 08:14:11] 2025-10-10 12:13:41,759 | INFO     | [job] retrieve thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:41,759 | INFO     | [job] job monitor thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:41,775 | INFO     | [job] control thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:41,957 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:41,990 | INFO     | [job] queue monitor thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:42,018 | INFO     | [payload] control thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:42,349 | INFO     | [payload] failed_post thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:42,349 | INFO     | [payload] validate_post thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:42,606 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:42,676 | INFO     | [data] control thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:42,965 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:43,030 | INFO     | [job] validate thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:43,062 | INFO     | [data] copytool_in thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:43,111 | INFO     | [data] copytool_out thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:44,952 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:51,275 | INFO     | job.realtimelogging is not enabled
[2025-10-10 08:14:11] 2025-10-10 12:13:52,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 08:14:11] 2025-10-10 12:13:57,417 | INFO     | [monitor] cgroup control has ended
[2025-10-10 08:14:11] 2025-10-10 12:13:58,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720192927552)>', '<ExcThread(monitor, started 139719555925760)>']
[2025-10-10 08:14:11] 2025-10-10 12:14:03,215 | INFO     | all workflow threads have been joined
[2025-10-10 08:14:11] 2025-10-10 12:14:03,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 08:14:11] 2025-10-10 12:14:03,215 | INFO     | traces error code: 0
[2025-10-10 08:14:11] 2025-10-10 12:14:03,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 08:14:11] 2025-10-10 12:14:09,056 | INFO     | PID=1898255 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 08:14:11] 2025-10-10 12:14:09,062 | INFO     | .. there are 62 such processes running
[2025-10-10 08:14:11] 2025-10-10 12:14:09,062 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 08:14:11] 2025-10-10 12:14:09,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 08:14:11] 2025-10-10 12:14:09,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 08:14:11] 2025-10-10 12:14:09,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 08:14:11] 2025-10-10 12:14:09,063 | INFO     | [monitor] control thread has ended
[2025-10-10 08:14:11] 2025-10-10 12:14:09,318 [wrapper] ==== pilot stdout END ====
[2025-10-10 08:14:11] 2025-10-10 12:14:09,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 08:14:11] 2025-10-10 12:14:09,434 [wrapper] pilotpid: 1898255
[2025-10-10 08:14:11] 2025-10-10 12:14:09,466 [wrapper] Pilot exit status: 0
[2025-10-10 08:14:11] 2025-10-10 12:14:09,708 [wrapper] pandaids: 6837365277
[2025-10-10 08:14:11] 2025-10-10 12:14:10,348 [wrapper] cleanup supervisor_pilot 2566911 1898256
[2025-10-10 08:14:11] 2025-10-10 12:14:10,388 [wrapper] Test setup, not cleaning
[2025-10-10 08:14:11] 2025-10-10 12:14:10,438 [wrapper] apfmon messages muted
[2025-10-10 08:14:11] 2025-10-10 12:14:10,484 [wrapper] ==== wrapper stdout END ====
[2025-10-10 08:14:11] 2025-10-10 12:14:10,534 [wrapper] ==== wrapper stderr END ====
[2025-10-10 08:14:11]  *** Error codes and diagnostics ***
[2025-10-10 08:14:11]     "exeErrorCode": 0,
[2025-10-10 08:14:11]     "exeErrorDiag": "",
[2025-10-10 08:14:11]     "pilotErrorCode": 0,
[2025-10-10 08:14:11]     "pilotErrorDiag": "",
[2025-10-10 08:14:11]  *** Listing of results directory ***
[2025-10-10 08:14:11] total 410928
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 18:39 pilot3.tar.gz
[2025-10-10 08:14:11] -rwx------. 1 boincer umatlas     36292 Oct  9 18:53 runpilot2-wrapper.sh
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 18:53 queuedata.json
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 08:14:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:56 run_atlas
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:56 job.xml
[2025-10-10 08:14:11] -rw-r--r--. 2 boincer umatlas 220277788 Oct 10 06:56 EVNT.46676267._001159.pool.root.1
[2025-10-10 08:14:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:56 start_atlas.sh
[2025-10-10 08:14:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:56 shared
[2025-10-10 08:14:11] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 06:56 input.tar.gz
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:56 boinc_lockfile
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 06:56 pandaJob.out
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas    975528 Oct 10 06:57 agis_schedconf.cvmfs.json
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas   1560580 Oct 10 06:57 agis_ddmendpoints.agis.ALL.json
[2025-10-10 08:14:11] drwx------. 5 boincer umatlas      4096 Oct 10 06:57 pilot3
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas      7163 Oct 10 08:10 init_data.xml
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas 194741732 Oct 10 08:11 HITS.46676269._027587.pool.root.1
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas       529 Oct 10 08:11 boinc_task_state.xml
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas      1033 Oct 10 08:12 memory_monitor_summary.json
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas    311867 Oct 10 08:12 log.46676269._027587.job.log.tgz.1
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas      7777 Oct 10 08:13 heartbeat.json
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas       823 Oct 10 08:14 pilotlog.txt
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas        95 Oct 10 08:14 pilot_heartbeat.json
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas    619639 Oct 10 08:14 log.46676269._027587.job.log.1
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 08:14 boinc_mmap_file
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas        27 Oct 10 08:14 wrapper_checkpoint.txt
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas       357 Oct 10 08:14 output.list
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas       620 Oct 10 08:14 runtime_log
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas    952320 Oct 10 08:14 result.tar.gz
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas       650 Oct 10 08:14 y4dLDm4gER8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIYbNDmVCJrhm.diag
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas      8712 Oct 10 08:14 runtime_log.err
[2025-10-10 08:14:11] -rw-r--r--. 1 boincer umatlas     22338 Oct 10 08:14 stderr.txt
[2025-10-10 08:14:11] HITS file was successfully produced:
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas 194741732 Oct 10 08:11 shared/HITS.pool.root.1
[2025-10-10 08:14:11]  *** Contents of shared directory: ***
[2025-10-10 08:14:11] total 406812
[2025-10-10 08:14:11] -rw-r--r--. 2 boincer umatlas 220277788 Oct 10 06:56 ATLAS.root_0
[2025-10-10 08:14:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:56 start_atlas.sh
[2025-10-10 08:14:11] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 06:56 input.tar.gz
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas 194741732 Oct 10 08:11 HITS.pool.root.1
[2025-10-10 08:14:11] -rw-------. 1 boincer umatlas    952320 Oct 10 08:14 result.tar.gz
08:14:13 (1877080): run_atlas exited; CPU time 22423.891696
08:14:13 (1877080): called boinc_finish(0)

</stderr_txt>
]]>

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