Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:16:25 (2646930): wrapper (7.7.26015): starting
06:16:25 (2646930): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 06:16:25] Arguments: --nthreads 8
[2025-10-10 06:16:25] Threads: 8
[2025-10-10 06:16:25] Checking for CVMFS
[2025-10-10 06:16:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:16:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:16:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:16:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:16:26] 2.13.1.0 4140 1225 67476 151543 3 9 32039704 39288832 3664 16776704 0 4192906 99.998 39819 37006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 06:16:26] CVMFS is ok
[2025-10-10 06:16:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:16:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:16:26] Further information can be found at the LHC@home message board.
[2025-10-10 06:16:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:16:26] Checking for apptainer binary...
[2025-10-10 06:16:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:16:26] Running /usr/bin/apptainer --version
[2025-10-10 06:16:26] apptainer version 1.4.3-1.el9
[2025-10-10 06:16:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:16:26] c-210-16.aglt2.org
[2025-10-10 06:16:26] apptainer works
[2025-10-10 06:16:26] Set ATHENA_PROC_NUMBER=8
[2025-10-10 06:16:26] Set ATHENA_CORE_NUMBER=8
[2025-10-10 06:16:26] Starting ATLAS job with PandaID=6837376061
[2025-10-10 06:16:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:55:52]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:55:52]  mtime=0
[2025-10-10 07:55:52]  protocol_id=None
[2025-10-10 07:55:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 07:55:52]  replicas=None
[2025-10-10 07:55:52]  scope=mc23_13p6TeV
[2025-10-10 07:55:52]  status=None
[2025-10-10 07:55:52]  status_code=0
[2025-10-10 07:55:52]  storage_token=
[2025-10-10 07:55:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837376061/log.46676269._028243.job.log.tgz.1
[2025-10-10 07:55:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/d5/log.46676269._028243.job.log.tgz.1
[2025-10-10 07:55:52]  workdir=None
[2025-10-10 07:55:52] ]
[2025-10-10 07:55:52] 2025-10-10 11:54:56,808 | INFO     | transferring file log.46676269._028243.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837376061/log.46676269._028243.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 07:55:52] 2025-10-10 11:54:56,808 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837376061/log.46676269._028243.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._028243.job
[2025-10-10 07:55:52] 2025-10-10 11:54:56,821 | INFO     | adding to output.list: log.46676269._028243.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/d5/log.46676269._028243.job.log.tg
[2025-10-10 07:55:52] 2025-10-10 11:54:56,822 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 07:55:52] 2025-10-10 11:54:56,822 | INFO     | summary of transferred files:
[2025-10-10 07:55:52] 2025-10-10 11:54:56,822 | INFO     |  -- lfn=log.46676269._028243.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 07:55:52] 2025-10-10 11:54:56,822 | INFO     | stage-out finished correctly
[2025-10-10 07:55:52] 2025-10-10 11:54:57,862 | INFO     | time since job start (5900s) is within the limit (172800.0s)
[2025-10-10 07:55:52] 2025-10-10 11:54:57,871 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 07:55:52] 2025-10-10 11:54:59,134 | INFO     | monitor loop #439: job 0:6837376061 is in state 'finished'
[2025-10-10 07:55:52] 2025-10-10 11:54:59,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:55:52] 2025-10-10 11:54:59,392 | INFO     | job 6837376061 has state=finished
[2025-10-10 07:55:52] 2025-10-10 11:54:59,392 | INFO     | preparing for final server update for job 6837376061 in state='finished'
[2025-10-10 07:55:52] 2025-10-10 11:54:59,393 | INFO     | this job has now completed (state=finished)
[2025-10-10 07:55:52] 2025-10-10 11:54:59,393 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 07:55:52] 2025-10-10 11:54:59,393 | INFO     | log transfer has been attempted: DONE
[2025-10-10 07:55:52] 2025-10-10 11:54:59,393 | INFO     | job 6837376061 has finished - writing final server update
[2025-10-10 07:55:52] 2025-10-10 11:54:59,394 | INFO     | total number of processed events: 400 (read)
[2025-10-10 07:55:52] 2025-10-10 11:54:59,395 | INFO     | executing command: lscpu
[2025-10-10 07:55:52] 2025-10-10 11:54:59,436 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 07:55:52] 2025-10-10 11:54:59,868 | INFO     | time since job start (5902s) is within the limit (172800.0s)
[2025-10-10 07:55:52] 2025-10-10 11:55:01,638 | INFO     | monitor loop #440: job 0:6837376061 is in state 'finished'
[2025-10-10 07:55:52] 2025-10-10 11:55:01,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:55:52] 2025-10-10 11:55:01,874 | INFO     | time since job start (5904s) is within the limit (172800.0s)
[2025-10-10 07:55:52] 2025-10-10 11:55:02,823 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 07:55:52] 2025-10-10 11:55:02,829 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.1122
[2025-10-10 07:55:52] 2025-10-10 11:55:02,836 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837376061/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:55:52] 2025-10-10 11:55:02,837 | INFO     | extracted standard info from prmon json
[2025-10-10 07:55:52] 2025-10-10 11:55:02,837 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:55:52] 2025-10-10 11:55:02,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:55:52] 2025-10-10 11:55:02,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:55:52] 2025-10-10 11:55:02,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:55:52] 2025-10-10 11:55:02,840 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:55:52] 2025-10-10 11:55:02,841 | INFO     | sum of square deviations: 226022842.5
[2025-10-10 07:55:52] 2025-10-10 11:55:02,841 | INFO     | sum of deviations: -12268224016.5
[2025-10-10 07:55:52] 2025-10-10 11:55:02,842 | INFO     | mean x: 1760094441.5
[2025-10-10 07:55:52] 2025-10-10 11:55:02,842 | INFO     | mean y: 2657861.7444444443
[2025-10-10 07:55:52] 2025-10-10 11:55:02,842 | INFO     | -- intersect: 95538280100.98097
[2025-10-10 07:55:52] 2025-10-10 11:55:02,842 | INFO     | intersect: 95538280100.98097
[2025-10-10 07:55:52] 2025-10-10 11:55:02,842 | INFO     | chi2: 0.03322984318979032
[2025-10-10 07:55:52] 2025-10-10 11:55:02,842 | INFO     | -- intersect: 95538280100.98097
[2025-10-10 07:55:52] 2025-10-10 11:55:02,843 | INFO     | current memory leak: -54.28 B/s (using 90 data points, chi2=0.03)
[2025-10-10 07:55:52] 2025-10-10 11:55:02,843 | INFO     | could have reported an average CPU frequency of 2608 MHz (7 samples)
[2025-10-10 07:55:52] 2025-10-10 11:55:02,843 | INFO     | ..............................
[2025-10-10 07:55:52] 2025-10-10 11:55:02,843 | INFO     | . Timing measurements:
[2025-10-10 07:55:52] 2025-10-10 11:55:02,843 | INFO     | . get job = 0 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,843 | INFO     | . initial setup = 2 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,844 | INFO     | . payload setup = 5 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,844 | INFO     | . stage-in = 0 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,844 | INFO     | . payload execution = 5878 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,844 | INFO     | . stage-out = 0 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,844 | INFO     | . log creation = 0 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,844 | INFO     | ..............................
[2025-10-10 07:55:52] 2025-10-10 11:55:02,949 | INFO     | 
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | job summary report
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | --------------------------------------------------
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | PanDA job id: 6837376061
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | task id: 46676269
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | errors: (none)
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | pilot state: finished 
[2025-10-10 07:55:52] 2025-10-10 11:55:02,950 | INFO     | transexitcode: 0
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | exeerrorcode: 0
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | exeerrordiag: 
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | exitcode: 0
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | exitmsg: OK
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | cpuconsumptiontime: 43923 s
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | nevents: 400
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | neventsw: 0
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | pid: 2659234
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | pgrp: 2659234
[2025-10-10 07:55:52] 2025-10-10 11:55:02,951 | INFO     | corecount: 8
[2025-10-10 07:55:52] 2025-10-10 11:55:02,952 | INFO     | event service: False
[2025-10-10 07:55:52] 2025-10-10 11:55:02,952 | INFO     | sizes: {0: 2348743, 1: 2348885, 5: 2349147, 11: 2349203, 5884: 2375991, 5885: 2384989, 5886: 2385173, 5891: 2385367}
[2025-10-10 07:55:52] 2025-10-10 11:55:02,952 | INFO     | --------------------------------------------------
[2025-10-10 07:55:52] 2025-10-10 11:55:02,952 | INFO     | 
[2025-10-10 07:55:52] 2025-10-10 11:55:02,952 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 07:55:52] 2025-10-10 11:55:02,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,969 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,969 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,969 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:55:52] 2025-10-10 11:55:02,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:55:52] 2025-10-10 11:55:02,971 | INFO     | job 6837376061 has completed (purged errors)
[2025-10-10 07:55:52] 2025-10-10 11:55:02,971 | INFO     | overall cleanup function is called
[2025-10-10 07:55:52] 2025-10-10 11:55:03,979 | INFO     | --- collectZombieJob: --- 10, [2659234]
[2025-10-10 07:55:52] 2025-10-10 11:55:03,979 | INFO     | zombie collector waiting for pid 2659234
[2025-10-10 07:55:52] 2025-10-10 11:55:03,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:55:52] 2025-10-10 11:55:03,979 | INFO     | collected zombie processes
[2025-10-10 07:55:52] 2025-10-10 11:55:03,980 | INFO     | will attempt to kill all subprocesses of pid=2659234
[2025-10-10 07:55:52] 2025-10-10 11:55:04,208 | INFO     | process IDs to be killed: [2659234] (in reverse order)
[2025-10-10 07:55:52] 2025-10-10 11:55:04,270 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:55:52] 2025-10-10 11:55:04,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:55:52] 2025-10-10 11:55:04,278 | INFO     | did not find any defunct processes belonging to 2659234
[2025-10-10 07:55:52] 2025-10-10 11:55:04,284 | INFO     | did not find any defunct processes belonging to 2659234
[2025-10-10 07:55:52] 2025-10-10 11:55:04,284 | INFO     | ready for new job
[2025-10-10 07:55:52] 2025-10-10 11:55:04,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:55:52] 2025-10-10 11:55:04,286 | INFO     | ***************************************
[2025-10-10 07:55:52] 2025-10-10 11:55:04,286 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:55:52] 2025-10-10 11:55:04,286 | INFO     | ***************************************
[2025-10-10 07:55:52] 2025-10-10 11:55:04,286 | INFO     | 
[2025-10-10 07:55:52] 2025-10-10 11:55:04,288 | INFO     | architecture information:
[2025-10-10 07:55:52] 2025-10-10 11:55:04,288 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:55:52] 2025-10-10 11:55:04,300 | INFO     | cat /etc/os-release:
[2025-10-10 07:55:52] NAME="CentOS Linux"
[2025-10-10 07:55:52] VERSION="7 (Core)"
[2025-10-10 07:55:52] ID="centos"
[2025-10-10 07:55:52] ID_LIKE="rhel fedora"
[2025-10-10 07:55:52] VERSION_ID="7"
[2025-10-10 07:55:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:55:52] ANSI_COLOR="0;31"
[2025-10-10 07:55:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:55:52] HOME_URL="https://www.centos.org/"
[2025-10-10 07:55:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:55:52] 
[2025-10-10 07:55:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:55:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:55:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:55:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:55:52] 
[2025-10-10 07:55:52] 2025-10-10 11:55:04,300 | INFO     | ***************************************
[2025-10-10 07:55:52] 2025-10-10 11:55:04,803 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 07:55:52] 2025-10-10 11:55:04,819 | INFO     | sufficient remaining disk space (51662290944 B)
[2025-10-10 07:55:52] 2025-10-10 11:55:04,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:55:52] 2025-10-10 11:55:04,819 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:55:52] 2025-10-10 11:55:04,819 | INFO     | update_server=False
[2025-10-10 07:55:52] 2025-10-10 11:55:04,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:55:52] 2025-10-10 11:55:04,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:55:52] 2025-10-10 11:55:04,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:55:52] 2025-10-10 11:55:04,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:55:52] 2025-10-10 11:55:05,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:55:52] 2025-10-10 11:55:05,147 | INFO     | aborting loop
[2025-10-10 07:55:52] 2025-10-10 11:55:05,287 | INFO     | all job control threads have been joined
[2025-10-10 07:55:52] 2025-10-10 11:55:05,705 | INFO     | all data control threads have been joined
[2025-10-10 07:55:52] 2025-10-10 11:55:05,821 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:05,826 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:05,892 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,018 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,047 | INFO     | [job] validate thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,152 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,226 | INFO     | all payload control threads have been joined
[2025-10-10 07:55:52] 2025-10-10 11:55:06,292 | INFO     | [job] control thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,536 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,711 | INFO     | [data] control thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,719 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,784 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:06,898 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:07,160 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:07,231 | INFO     | [payload] control thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:08,826 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:55:52] 2025-10-10 11:55:35,210 | INFO     | PID=2652852 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 07:55:52] 2025-10-10 11:55:35,210 | INFO     | .. there are 5 such processes running
[2025-10-10 07:55:52] 2025-10-10 11:55:35,211 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:55:52] 2025-10-10 11:55:35,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:55:52] 2025-10-10 11:55:35,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:55:52] 2025-10-10 11:55:46,487 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:55:52] 2025-10-10 11:55:47,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140570750469952)>', '<ExcThread(monitor, started 140570110453504)>']
[2025-10-10 07:55:52] 2025-10-10 11:55:48,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:55:52] 2025-10-10 11:55:48,274 | INFO     | [monitor] control thread has ended
[2025-10-10 07:55:52] 2025-10-10 11:55:52,518 | INFO     | all workflow threads have been joined
[2025-10-10 07:55:52] 2025-10-10 11:55:52,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:55:52] 2025-10-10 11:55:52,519 | INFO     | traces error code: 0
[2025-10-10 07:55:52] 2025-10-10 11:55:52,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:55:52] 2025-10-10 11:55:52,629 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:55:52] 2025-10-10 11:55:52,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:55:52] 2025-10-10 11:55:52,634 [wrapper] pilotpid: 2652852
[2025-10-10 07:55:52] 2025-10-10 11:55:52,636 [wrapper] Pilot exit status: 0
[2025-10-10 07:55:52] 2025-10-10 11:55:52,646 [wrapper] pandaids: 6837376061
[2025-10-10 07:55:52] 2025-10-10 11:55:52,688 [wrapper] cleanup supervisor_pilot 2846402 2652853
[2025-10-10 07:55:52] 2025-10-10 11:55:52,691 [wrapper] Test setup, not cleaning
[2025-10-10 07:55:52] 2025-10-10 11:55:52,693 [wrapper] apfmon messages muted
[2025-10-10 07:55:52] 2025-10-10 11:55:52,696 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:55:52] 2025-10-10 11:55:52,698 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:55:52]  *** Error codes and diagnostics ***
[2025-10-10 07:55:52]     "exeErrorCode": 0,
[2025-10-10 07:55:52]     "exeErrorDiag": "",
[2025-10-10 07:55:52]     "pilotErrorCode": 0,
[2025-10-10 07:55:52]     "pilotErrorDiag": "",
[2025-10-10 07:55:52]  *** Listing of results directory ***
[2025-10-10 07:55:52] total 408820
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 19:37 pilot3.tar.gz
[2025-10-10 07:55:52] -rwx------. 1 boincer umatlas     36292 Oct  9 19:39 runpilot2-wrapper.sh
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 19:39 queuedata.json
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:55:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:16 run_atlas
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:16 job.xml
[2025-10-10 07:55:52] -rw-r--r--. 2 boincer umatlas 223712328 Oct 10 06:16 EVNT.46676267._001185.pool.root.1
[2025-10-10 07:55:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:16 start_atlas.sh
[2025-10-10 07:55:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:16 shared
[2025-10-10 07:55:52] -rw-r--r--. 2 boincer umatlas    569672 Oct 10 06:16 input.tar.gz
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:16 boinc_lockfile
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 06:16 pandaJob.out
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas    975528 Oct 10 06:16 agis_schedconf.cvmfs.json
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas   1560580 Oct 10 06:16 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:55:52] drwx------. 5 boincer umatlas      4096 Oct 10 06:16 pilot3
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas      6658 Oct 10 07:54 init_data.xml
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas 188620636 Oct 10 07:54 HITS.46676269._028243.pool.root.1
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas       529 Oct 10 07:54 boinc_task_state.xml
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas      1033 Oct 10 07:54 memory_monitor_summary.json
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas    333647 Oct 10 07:54 log.46676269._028243.job.log.tgz.1
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas      7812 Oct 10 07:55 heartbeat.json
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas        95 Oct 10 07:55 pilot_heartbeat.json
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 07:55 boinc_mmap_file
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas        27 Oct 10 07:55 wrapper_checkpoint.txt
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas      4823 Oct 10 07:55 pilotlog.txt
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas    862377 Oct 10 07:55 log.46676269._028243.job.log.1
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas       357 Oct 10 07:55 output.list
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas       620 Oct 10 07:55 runtime_log
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas   1218560 Oct 10 07:55 result.tar.gz
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas       652 Oct 10 07:55 x5GNDmjPFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0dbNDmJGhHrn.diag
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas      8703 Oct 10 07:55 runtime_log.err
[2025-10-10 07:55:52] -rw-r--r--. 1 boincer umatlas     21687 Oct 10 07:55 stderr.txt
[2025-10-10 07:55:52] HITS file was successfully produced:
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas 188620636 Oct 10 07:54 shared/HITS.pool.root.1
[2025-10-10 07:55:52]  *** Contents of shared directory: ***
[2025-10-10 07:55:52] total 404444
[2025-10-10 07:55:52] -rw-r--r--. 2 boincer umatlas 223712328 Oct 10 06:16 ATLAS.root_0
[2025-10-10 07:55:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:16 start_atlas.sh
[2025-10-10 07:55:52] -rw-r--r--. 2 boincer umatlas    569672 Oct 10 06:16 input.tar.gz
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas 188620636 Oct 10 07:54 HITS.pool.root.1
[2025-10-10 07:55:52] -rw-------. 1 boincer umatlas   1218560 Oct 10 07:55 result.tar.gz
07:55:54 (2646930): run_atlas exited; CPU time 44036.034432
07:55:54 (2646930): called boinc_finish(0)

</stderr_txt>
]]>

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