Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 22:21:05 (568): vboxwrapper version 26210
2025-10-10 22:21:05 (568): BOINC client version: 8.2.5
2025-10-10 22:21:05 (568): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-10 22:21:06 (568): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 22:21:06 (568): Create VM. (boinc_a3212d57a19d5c5a, slot#11)
2025-10-10 22:21:07 (568): Setting Memory Size for VM. (4096MB)
2025-10-10 22:21:07 (568): Setting CPU Count for VM. (1)
2025-10-10 22:21:07 (568): Setting Chipset Options for VM.
2025-10-10 22:21:07 (568): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 22:21:08 (568): Setting Boot Options for VM.
2025-10-10 22:21:08 (568): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 22:21:08 (568): Enabling VM Network Access.
2025-10-10 22:21:09 (568): Disabling USB Support for VM.
2025-10-10 22:21:09 (568): Disabling COM Port Support for VM.
2025-10-10 22:21:09 (568): Disabling LPT Port Support for VM.
2025-10-10 22:21:10 (568): Disabling Audio Support for VM.
2025-10-10 22:21:10 (568): Disabling Clipboard Support for VM.
2025-10-10 22:21:10 (568): Disabling Drag and Drop Support for VM.
2025-10-10 22:21:11 (568): Adding storage controller(s) to VM.
2025-10-10 22:21:11 (568): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 22:21:11 (568): Adding VirtualBox Guest Additions to VM.
2025-10-10 22:21:12 (568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 22:21:12 (568): forwarding host port 59972 to guest port 80
2025-10-10 22:21:12 (568): Enabling remote desktop for VM.
2025-10-10 22:21:13 (568): Enabling shared directory for VM.
2025-10-10 22:21:14 (568): Starting VM using VBoxManage interface. (boinc_a3212d57a19d5c5a, slot#11)
2025-10-10 22:21:22 (568): Successfully started VM. (PID = '10224')
2025-10-10 22:21:22 (568): Reporting VM Process ID to BOINC.
2025-10-10 22:21:22 (568): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-10 22:21:22 (568): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 22:21:22 (568): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 22:21:22 (568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 22:21:22 (568): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 22:21:22 (568): Detected: Web Application Enabled (http://localhost:59972)
2025-10-10 22:21:22 (568): Detected: Remote Desktop Enabled (localhost:59973)
2025-10-10 22:21:22 (568): Preference change detected
2025-10-10 22:21:22 (568): Setting CPU throttle for VM. (100%)
2025-10-10 22:21:22 (568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 22:21:24 (568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 22:21:24 (568): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 22:21:28 (568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 22:21:28 (568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 22:21:28 (568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 22:21:36 (568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 22:21:36 (568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 22:21:55 (568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.000280 main     Log opened 2025-10-10T22:21:53.673225000Z
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.000442 main     OS Product: Linux
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.000483 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.000520 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.000575 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.000576 main     Process ID: 1251
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.000577 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 22:21:55 (568): Guest Log: 00:00:00.008239 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 22:21:55 (568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 22:21:55 (568): Guest Log: [INFO] Mounting shared directory
2025-10-10 22:21:55 (568): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 22:21:59 (568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 22:21:59 (568): Guest Log: [INFO] Detected branch: prod
2025-10-10 22:21:59 (568): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 22:21:59 (568): Guest Log: Copying input files
2025-10-10 22:22:01 (568): Guest Log: Copied input files into RunAtlas.
2025-10-10 22:22:01 (568): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-10-10 22:22:05 (568): Guest Log: 00:00:10.044263 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 543 981 000ns (GuestNow=1 760 127 725 171 106 000 ns GuestLast=1 760 134 913 715 087 000 ns fSetTimeLastLoop=true )
2025-10-10 22:22:08 (568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 22:22:08 (568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 22:22:08 (568): Guest Log: 2.6.3.0 1520 0 31552 151560 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-10-10 22:22:09 (568): Guest Log: copied the webapp to /var/www
2025-10-10 22:22:09 (568): Guest Log: core_number=1
2025-10-10 22:22:10 (568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 22:22:10 (568): Guest Log:  *** Starting ATLAS job. (PandaID=6837333268 taskID=46676269) ***
2025-10-11 00:01:34 (568): Status Report: Elapsed Time: '6000.000000'
2025-10-11 00:01:34 (568): Status Report: CPU Time: '5932.468750'
2025-10-11 01:41:40 (568): Status Report: Elapsed Time: '12000.000000'
2025-10-11 01:41:40 (568): Status Report: CPU Time: '11920.437500'
2025-10-11 03:21:45 (568): Status Report: Elapsed Time: '18000.000000'
2025-10-11 03:21:45 (568): Status Report: CPU Time: '17907.484375'
2025-10-11 05:01:51 (568): Status Report: Elapsed Time: '24000.000000'
2025-10-11 05:01:51 (568): Status Report: CPU Time: '23893.562500'
2025-10-11 06:41:56 (568): Status Report: Elapsed Time: '30000.000000'
2025-10-11 06:41:56 (568): Status Report: CPU Time: '29880.656250'
2025-10-11 08:22:01 (568): Status Report: Elapsed Time: '36000.000000'
2025-10-11 08:22:01 (568): Status Report: CPU Time: '35866.265625'
2025-10-11 10:02:06 (568): Status Report: Elapsed Time: '42000.000000'
2025-10-11 10:02:06 (568): Status Report: CPU Time: '41854.984375'
2025-10-11 11:42:12 (568): Status Report: Elapsed Time: '48000.000000'
2025-10-11 11:42:12 (568): Status Report: CPU Time: '47842.515625'
2025-10-11 12:45:03 (568): Guest Log:  *** Job finished ***
2025-10-11 12:45:03 (568): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:44:58,995 | INFO     | PID=5860 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:44:58,995 | INFO     | found 0 job(s) in 20 queues
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:44:58,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:44:58,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:44:58,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:44:58,996 | INFO     | [monitor] control thread has ended
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,173 | INFO     | all workflow threads have been joined
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,174 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,174 | INFO     | traces error code: 0
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,292 [wrapper] ==== pilot stdout END ====
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,298 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,305 [wrapper] pilotpid: 5860
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,310 [wrapper] Pilot exit status: 0
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,369 [wrapper] pandaids: 6837333268
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,407 [wrapper] cleanup supervisor_pilot  8214 5861
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,412 [wrapper] Test setup, not cleaning
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,418 [wrapper] apfmon messages muted
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,423 [wrapper] ==== wrapper stdout END ====
2025-10-11 12:45:03 (568): Guest Log: 2025-10-11 10:45:02,429 [wrapper] ==== wrapper stderr END ====
2025-10-11 12:45:03 (568): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 12:45:03 (568): Guest Log:     "exeErrorCode": 0,
2025-10-11 12:45:03 (568): Guest Log:     "exeErrorDiag": "",
2025-10-11 12:45:03 (568): Guest Log:     "pilotErrorCode": 0,
2025-10-11 12:45:03 (568): Guest Log:     "pilotErrorDiag": "",
2025-10-11 12:45:03 (568): Guest Log:  *** Listing of results directory ***
2025-10-11 12:45:03 (568): Guest Log: total 209612
2025-10-11 12:45:03 (568): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 11:10 pilot3.tar.gz
2025-10-11 12:45:03 (568): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 11:22 queuedata.json
2025-10-11 12:45:03 (568): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 11:22 runpilot2-wrapper.sh
2025-10-11 12:45:03 (568): Guest Log: -rwxr-xr-x. 1 atlas atlas      9441 Oct 10 20:22 init_data.xml
2025-10-11 12:45:03 (568): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct 10 20:22 input.tar.gz
2025-10-11 12:45:03 (568): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 20:22 start_atlas.sh
2025-10-11 12:45:03 (568): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 20:22 EVNT.46676267._000639.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 12:45:03 (568): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 10 20:22 pandaJob.out
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas    975533 Oct 10 20:22 agis_schedconf.cvmfs.json
2025-10-11 12:45:03 (568): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 20:23 pilot3
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas 195032946 Oct 11 10:43 HITS.46676269._015547.pool.root.1
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas      1020 Oct 11 10:44 memory_monitor_summary.json
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 10:44 agis_ddmendpoints.agis.ALL.json
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas    874930 Oct 11 10:44 log.46676269._015547.job.log.tgz.1
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas      7807 Oct 11 10:44 heartbeat.json
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 10:44 pilot_heartbeat.json
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 11 10:45 pilotlog.txt
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas   7010002 Oct 11 10:45 log.46676269._015547.job.log.1
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 10:45 output.list
2025-10-11 12:45:03 (568): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 10:45 runtime_log
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas   7905280 Oct 11 10:45 result.tar.gz
2025-10-11 12:45:03 (568): Guest Log: -rw-r--r--. 1 atlas atlas      8513 Oct 11 10:45 runtime_log.err
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas       656 Oct 11 10:45 NGzKDmYu3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6kNMDmQfX7sm.diag
2025-10-11 12:45:03 (568): Guest Log: Looking for outputfile HITS.46676269._015547.pool.root.1
2025-10-11 12:45:03 (568): Guest Log: HITS file was successfully produced
2025-10-11 12:45:03 (568): Guest Log: -rw-------. 1 atlas atlas 195032946 Oct 11 10:43 /home/atlas/RunAtlas/HITS.46676269._015547.pool.root.1
2025-10-11 12:45:06 (568): Guest Log: Successfully finished the ATLAS job!
2025-10-11 12:45:06 (568): Guest Log: Copying the results back to the shared directory!
2025-10-11 12:45:06 (568): Guest Log:  *** Contents of shared directory: ***
2025-10-11 12:45:06 (568): Guest Log: total 413668
2025-10-11 12:45:06 (568): Guest Log: -rwxrwxrwx. 1 root root 220053187 Oct 10 20:21 ATLAS.root_0
2025-10-11 12:45:06 (568): Guest Log: -rwxrwxrwx. 1 root root 195032946 Oct 11 10:45 HITS.pool.root.1
2025-10-11 12:45:06 (568): Guest Log: -rwxrwxrwx. 1 root root      9441 Oct 10 20:21 init_data.xml
2025-10-11 12:45:06 (568): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct 10 10:07 input.tar.gz
2025-10-11 12:45:06 (568): Guest Log: -rwxrwxrwx. 1 root root   7905280 Oct 11 10:45 result.tar.gz
2025-10-11 12:45:06 (568): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 10:07 start_atlas.sh
2025-10-11 12:45:06 (568): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 12:45:06 (568): VM Completion File Detected.
2025-10-11 12:45:06 (568): Powering off VM.
2025-10-11 12:45:07 (568): Successfully stopped VM.
2025-10-11 12:45:07 (568): Deregistering VM. (boinc_a3212d57a19d5c5a, slot#11)
2025-10-11 12:45:07 (568): Removing network bandwidth throttle group from VM.
2025-10-11 12:45:07 (568): Removing VM from VirtualBox.
2025-10-11 12:45:12 (568): called boinc_finish(0)

</stderr_txt>
]]>

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