Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:09:59 (113246): wrapper (7.7.26015): starting
06:09:59 (113246): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 06:09:59] Arguments: --nthreads 8
[2025-10-10 06:09:59] Threads: 8
[2025-10-10 06:09:59] Checking for CVMFS
[2025-10-10 06:10:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:10:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:10:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:10:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:10:00] 2.13.2.0 552491 33989 178136 151541 0 985 33863475 40960000 46884 16776704 0 356690006 99.798 186740850 32947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 06:10:00] CVMFS is ok
[2025-10-10 06:10:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:10:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:10:00] Further information can be found at the LHC@home message board.
[2025-10-10 06:10:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:10:00] Checking for apptainer binary...
[2025-10-10 06:10:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:10:00] Running /usr/bin/apptainer --version
[2025-10-10 06:10:00] apptainer version 1.4.3-1.el9
[2025-10-10 06:10:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:10:01] c8-7-5.aglt2.org
[2025-10-10 06:10:01] apptainer works
[2025-10-10 06:10:01] Set ATHENA_PROC_NUMBER=8
[2025-10-10 06:10:01] Set ATHENA_CORE_NUMBER=8
[2025-10-10 06:10:01] Starting ATLAS job with PandaID=6837377771
[2025-10-10 06:10:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:23:32]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:23:32] 2025-10-10 11:22:32,801 | INFO     | monitor loop #295: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:32,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:34,678 | INFO     | time since job start (4288s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:35,311 | INFO     | monitor loop #296: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:35,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:36,689 | INFO     | time since job start (4290s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:37,815 | INFO     | monitor loop #297: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:37,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:38,696 | INFO     | time since job start (4292s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:40,330 | INFO     | monitor loop #298: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:40,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:40,703 | INFO     | time since job start (4294s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:42,712 | INFO     | time since job start (4296s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:42,840 | INFO     | monitor loop #299: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:42,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:44,719 | INFO     | time since job start (4298s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:45,346 | INFO     | monitor loop #300: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:45,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:47,603 | INFO     | PID=126990 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:23:32] 2025-10-10 11:22:47,603 | INFO     | .. there are 57 such processes running
[2025-10-10 07:23:32] 2025-10-10 11:22:47,865 | INFO     | monitor loop #301: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:47,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:48,629 | INFO     | time since job start (4302s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:50,388 | INFO     | monitor loop #302: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:50,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:50,637 | INFO     | time since job start (4304s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:52,645 | INFO     | time since job start (4306s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:52,893 | INFO     | monitor loop #303: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:52,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:54,656 | INFO     | time since job start (4308s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:55,419 | INFO     | monitor loop #304: job 0:6837377771 is in state 'finished'
[2025-10-10 07:23:32] 2025-10-10 11:22:55,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,064 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 07:23:32] 2025-10-10 11:22:56,100 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3796.5215156250038
[2025-10-10 07:23:32] 2025-10-10 11:22:56,196 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6837377771/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,196 | INFO     | extracted standard info from prmon json
[2025-10-10 07:23:32] 2025-10-10 11:22:56,197 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:23:32] 2025-10-10 11:22:56,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:23:32] 2025-10-10 11:22:56,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:23:32] 2025-10-10 11:22:56,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:23:32] 2025-10-10 11:22:56,198 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:23:32] 2025-10-10 11:22:56,213 | INFO     | sum of square deviations: 70362036.98360646
[2025-10-10 07:23:32] 2025-10-10 11:22:56,213 | INFO     | sum of deviations: -2898591296.2622952
[2025-10-10 07:23:32] 2025-10-10 11:22:56,213 | INFO     | mean x: 1760093342.0163934
[2025-10-10 07:23:32] 2025-10-10 11:22:56,213 | INFO     | mean y: 2368963.2622950817
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | -- intersect: 72510094158.40683
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | intersect: 72510094158.40683
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | chi2: 0.029963745828931757
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | -- intersect: 72510094158.40683
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | current memory leak: -41.20 B/s (using 61 data points, chi2=0.03)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | could have reported an average CPU frequency of 3794 MHz (6 samples)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | ..............................
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | . Timing measurements:
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | . get job = 0 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | . initial setup = 4 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | . payload setup = 51 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | . stage-in = 0 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,214 | INFO     | . payload execution = 4153 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,215 | INFO     | . stage-out = 1 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,215 | INFO     | . log creation = 0 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,215 | INFO     | ..............................
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | 
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | job summary report
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | --------------------------------------------------
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | PanDA job id: 6837377771
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | task id: 46676269
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | errors: (none)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | pilot state: finished 
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | transexitcode: 0
[2025-10-10 07:23:32] 2025-10-10 11:22:56,537 | INFO     | exeerrorcode: 0
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | exeerrordiag: 
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | exitcode: 0
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | exitmsg: OK
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | cpuconsumptiontime: 21882 s
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | nevents: 400
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | neventsw: 0
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | pid: 138762
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | pgrp: 138762
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | corecount: 8
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | event service: False
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 23: 2348912, 26: 2349202, 33: 2349230, 4208: 2375338, 4210: 2384336, 4212: 2384392, 4245: 2384586}
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | --------------------------------------------------
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | 
[2025-10-10 07:23:32] 2025-10-10 11:22:56,538 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-10 07:23:32] 2025-10-10 11:22:56,663 | INFO     | time since job start (4310s) is within the limit (172800.0s)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,680 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | job 6837377771 has completed (purged errors)
[2025-10-10 07:23:32] 2025-10-10 11:22:56,681 | INFO     | overall cleanup function is called
[2025-10-10 07:23:32] 2025-10-10 11:22:57,689 | INFO     | --- collectZombieJob: --- 10, [138762]
[2025-10-10 07:23:32] 2025-10-10 11:22:57,689 | INFO     | zombie collector waiting for pid 138762
[2025-10-10 07:23:32] 2025-10-10 11:22:57,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:23:32] 2025-10-10 11:22:57,689 | INFO     | collected zombie processes
[2025-10-10 07:23:32] 2025-10-10 11:22:57,689 | INFO     | will attempt to kill all subprocesses of pid=138762
[2025-10-10 07:23:32] 2025-10-10 11:22:59,097 | INFO     | process IDs to be killed: [138762] (in reverse order)
[2025-10-10 07:23:32] 2025-10-10 11:22:59,675 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:23:32] 2025-10-10 11:22:59,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:23:32] 2025-10-10 11:22:59,705 | INFO     | did not find any defunct processes belonging to 138762
[2025-10-10 07:23:32] 2025-10-10 11:22:59,737 | INFO     | did not find any defunct processes belonging to 138762
[2025-10-10 07:23:32] 2025-10-10 11:22:59,737 | INFO     | ready for new job
[2025-10-10 07:23:32] 2025-10-10 11:22:59,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:23:32] 2025-10-10 11:22:59,738 | INFO     | ***************************************
[2025-10-10 07:23:32] 2025-10-10 11:22:59,738 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:23:32] 2025-10-10 11:22:59,738 | INFO     | ***************************************
[2025-10-10 07:23:32] 2025-10-10 11:22:59,739 | INFO     | 
[2025-10-10 07:23:32] 2025-10-10 11:22:59,755 | INFO     | architecture information:
[2025-10-10 07:23:32] 2025-10-10 11:22:59,755 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:23:32] 2025-10-10 11:22:59,768 | INFO     | cat /etc/os-release:
[2025-10-10 07:23:32] NAME="CentOS Linux"
[2025-10-10 07:23:32] VERSION="7 (Core)"
[2025-10-10 07:23:32] ID="centos"
[2025-10-10 07:23:32] ID_LIKE="rhel fedora"
[2025-10-10 07:23:32] VERSION_ID="7"
[2025-10-10 07:23:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:23:32] ANSI_COLOR="0;31"
[2025-10-10 07:23:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:23:32] HOME_URL="https://www.centos.org/"
[2025-10-10 07:23:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:23:32] 
[2025-10-10 07:23:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:23:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:23:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:23:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:23:32] 
[2025-10-10 07:23:32] 2025-10-10 11:22:59,768 | INFO     | ***************************************
[2025-10-10 07:23:32] 2025-10-10 11:23:00,271 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-10 07:23:32] 2025-10-10 11:23:00,404 | INFO     | sufficient remaining disk space (169394307072 B)
[2025-10-10 07:23:32] 2025-10-10 11:23:00,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:23:32] 2025-10-10 11:23:00,405 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:23:32] 2025-10-10 11:23:00,405 | INFO     | update_server=False
[2025-10-10 07:23:32] 2025-10-10 11:23:00,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:23:32] 2025-10-10 11:23:00,446 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 07:23:32] 2025-10-10 11:23:00,446 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 07:23:32] 2025-10-10 11:23:00,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:23:32] 2025-10-10 11:23:00,446 | INFO     | will abort loop
[2025-10-10 07:23:32] 2025-10-10 11:23:00,533 | INFO     | all payload control threads have been joined
[2025-10-10 07:23:32] 2025-10-10 11:23:00,620 | INFO     | all job control threads have been joined
[2025-10-10 07:23:32] 2025-10-10 11:23:01,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:23:32] 2025-10-10 11:23:01,356 | INFO     | all data control threads have been joined
[2025-10-10 07:23:32] 2025-10-10 11:23:01,410 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:01,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:23:32] 2025-10-10 11:23:01,458 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:01,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:23:32] 2025-10-10 11:23:01,539 | INFO     | [payload] control thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:01,630 | INFO     | [job] control thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,195 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,206 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,351 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,362 | INFO     | [data] control thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,364 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,364 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,428 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,518 | INFO     | [job] validate thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:02,691 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:03,472 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:05,073 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:11,170 | INFO     | job.realtimelogging is not enabled
[2025-10-10 07:23:32] 2025-10-10 11:23:12,176 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:23:32] 2025-10-10 11:23:13,114 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:23:32] 2025-10-10 11:23:13,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118250342208)>', '<ExcThread(monitor, started 140117385664256)>']
[2025-10-10 07:23:32] 2025-10-10 11:23:18,504 | INFO     | all workflow threads have been joined
[2025-10-10 07:23:32] 2025-10-10 11:23:18,504 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:23:32] 2025-10-10 11:23:18,505 | INFO     | traces error code: 0
[2025-10-10 07:23:32] 2025-10-10 11:23:18,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:23:32] 2025-10-10 11:23:31,167 | INFO     | PID=126990 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:23:32] 2025-10-10 11:23:31,168 | INFO     | .. there are 57 such processes running
[2025-10-10 07:23:32] 2025-10-10 11:23:31,168 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:23:32] 2025-10-10 11:23:31,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:23:32] 2025-10-10 11:23:31,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:23:32] 2025-10-10 11:23:31,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:23:32] 2025-10-10 11:23:31,168 | INFO     | [monitor] control thread has ended
[2025-10-10 07:23:32] 2025-10-10 11:23:31,298 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:23:32] 2025-10-10 11:23:31,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:23:32] 2025-10-10 11:23:31,332 [wrapper] pilotpid: 126990
[2025-10-10 07:23:32] 2025-10-10 11:23:31,363 [wrapper] Pilot exit status: 0
[2025-10-10 07:23:32] 2025-10-10 11:23:31,506 [wrapper] pandaids: 6837377771
[2025-10-10 07:23:32] 2025-10-10 11:23:31,859 [wrapper] cleanup supervisor_pilot  603672 126991
[2025-10-10 07:23:32] 2025-10-10 11:23:31,873 [wrapper] Test setup, not cleaning
[2025-10-10 07:23:32] 2025-10-10 11:23:31,921 [wrapper] apfmon messages muted
[2025-10-10 07:23:32] 2025-10-10 11:23:31,940 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:23:32] 2025-10-10 11:23:31,978 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:23:32]  *** Error codes and diagnostics ***
[2025-10-10 07:23:32]     "exeErrorCode": 0,
[2025-10-10 07:23:32]     "exeErrorDiag": "",
[2025-10-10 07:23:32]     "pilotErrorCode": 0,
[2025-10-10 07:23:32]     "pilotErrorDiag": "",
[2025-10-10 07:23:32]  *** Listing of results directory ***
[2025-10-10 07:23:32] total 405804
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 20:42 pilot3.tar.gz
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 21:04 queuedata.json
[2025-10-10 07:23:32] -rwx------. 1 boincer umatlas     36292 Oct  9 21:04 runpilot2-wrapper.sh
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:23:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:09 run_atlas
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:09 job.xml
[2025-10-10 07:23:32] -rw-r--r--. 2 boincer umatlas 219886596 Oct 10 06:09 EVNT.46676267._001203.pool.root.1
[2025-10-10 07:23:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:09 start_atlas.sh
[2025-10-10 07:23:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:09 shared
[2025-10-10 07:23:32] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 06:09 input.tar.gz
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:09 boinc_lockfile
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 06:10 pandaJob.out
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas    975511 Oct 10 06:11 agis_schedconf.cvmfs.json
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas   1560580 Oct 10 06:11 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:23:32] drwx------. 5 boincer umatlas      4096 Oct 10 06:11 pilot3
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 07:20 init_data.xml
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas 189923369 Oct 10 07:21 HITS.46676269._029478.pool.root.1
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas       529 Oct 10 07:21 boinc_task_state.xml
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas      1041 Oct 10 07:22 memory_monitor_summary.json
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas    318727 Oct 10 07:22 log.46676269._029478.job.log.tgz.1
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas      7793 Oct 10 07:22 heartbeat.json
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 07:23 boinc_mmap_file
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas       822 Oct 10 07:23 pilotlog.txt
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas        95 Oct 10 07:23 pilot_heartbeat.json
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas        27 Oct 10 07:23 wrapper_checkpoint.txt
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas    595716 Oct 10 07:23 log.46676269._029478.job.log.1
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas       357 Oct 10 07:23 output.list
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas       620 Oct 10 07:23 runtime_log
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas    931840 Oct 10 07:23 result.tar.gz
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas      8693 Oct 10 07:23 runtime_log.err
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas       655 Oct 10 07:23 KcaLDmvjGR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmarbNDmtoBgVn.diag
[2025-10-10 07:23:32] -rw-r--r--. 1 boincer umatlas     22300 Oct 10 07:23 stderr.txt
[2025-10-10 07:23:32] HITS file was successfully produced:
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas 189923369 Oct 10 07:21 shared/HITS.pool.root.1
[2025-10-10 07:23:32]  *** Contents of shared directory: ***
[2025-10-10 07:23:32] total 401708
[2025-10-10 07:23:32] -rw-r--r--. 2 boincer umatlas 219886596 Oct 10 06:09 ATLAS.root_0
[2025-10-10 07:23:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:09 start_atlas.sh
[2025-10-10 07:23:32] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 06:09 input.tar.gz
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas 189923369 Oct 10 07:21 HITS.pool.root.1
[2025-10-10 07:23:32] -rw-------. 1 boincer umatlas    931840 Oct 10 07:23 result.tar.gz
07:23:34 (113246): run_atlas exited; CPU time 22025.087813
07:23:34 (113246): called boinc_finish(0)

</stderr_txt>
]]>

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