Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:13:10 (1313315): wrapper (7.7.26015): starting
06:13:10 (1313315): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 06:13:10] Arguments: --nthreads 9
[2025-10-10 06:13:10] Threads: 9
[2025-10-10 06:13:10] Checking for CVMFS
[2025-10-10 06:13:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:13:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:13:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:13:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:13:12] 2.13.2.0 3269412 32712 359256 151542 1 472 39767216 40960001 52002 16776704 0 405723244 99.835 174223833 37053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 06:13:12] CVMFS is ok
[2025-10-10 06:13:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:13:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:13:12] Further information can be found at the LHC@home message board.
[2025-10-10 06:13:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:13:12] Checking for apptainer binary...
[2025-10-10 06:13:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:13:12] Running /usr/bin/apptainer --version
[2025-10-10 06:13:12] apptainer version 1.4.3-1.el9
[2025-10-10 06:13:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:13:13] c8-16-2.aglt2.org
[2025-10-10 06:13:13] apptainer works
[2025-10-10 06:13:13] Set ATHENA_PROC_NUMBER=9
[2025-10-10 06:13:13] Set ATHENA_CORE_NUMBER=9
[2025-10-10 06:13:13] Starting ATLAS job with PandaID=6837364414
[2025-10-10 06:13:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:19:33]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:19:33] 2025-10-10 11:18:29,107 | INFO     | job 6837364414 has finished - writing final server update
[2025-10-10 07:19:33] 2025-10-10 11:18:29,107 | INFO     | total number of processed events: 400 (read)
[2025-10-10 07:19:33] 2025-10-10 11:18:29,119 | INFO     | executing command: lscpu
[2025-10-10 07:19:33] 2025-10-10 11:18:29,227 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 07:19:33] 2025-10-10 11:18:29,279 | INFO     | time since job start (3848s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:30,956 | INFO     | monitor loop #265: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:30,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:31,298 | INFO     | time since job start (3850s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:33,474 | INFO     | monitor loop #266: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:33,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:33,672 | INFO     | PID=1320798 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 07:19:33] 2025-10-10 11:18:33,672 | INFO     | .. there are 63 such processes running
[2025-10-10 07:19:33] 2025-10-10 11:18:34,689 | INFO     | time since job start (3853s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:35,979 | INFO     | monitor loop #267: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:35,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:36,696 | INFO     | time since job start (3855s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:38,486 | INFO     | monitor loop #268: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:38,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:38,703 | INFO     | time since job start (3857s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:40,713 | INFO     | time since job start (3859s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:40,994 | INFO     | monitor loop #269: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:40,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:42,720 | INFO     | time since job start (3861s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:43,501 | INFO     | monitor loop #270: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:43,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:44,730 | INFO     | time since job start (3863s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:46,006 | INFO     | monitor loop #271: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:46,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:46,737 | INFO     | time since job start (3865s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:48,511 | INFO     | monitor loop #272: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:48,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:48,744 | INFO     | time since job start (3867s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:50,751 | INFO     | time since job start (3869s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:51,039 | INFO     | monitor loop #273: job 0:6837364414 is in state 'finished'
[2025-10-10 07:19:33] 2025-10-10 11:18:51,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:19:33] 2025-10-10 11:18:52,758 | INFO     | time since job start (3871s) is within the limit (172800.0s)
[2025-10-10 07:19:33] 2025-10-10 11:18:53,329 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 07:19:33] 2025-10-10 11:18:53,334 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9901640624944
[2025-10-10 07:19:33] 2025-10-10 11:18:53,362 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6837364414/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:19:33] 2025-10-10 11:18:53,364 | INFO     | extracted standard info from prmon json
[2025-10-10 07:19:33] 2025-10-10 11:18:53,364 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:19:33] 2025-10-10 11:18:53,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:19:33] 2025-10-10 11:18:53,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:19:33] 2025-10-10 11:18:53,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:19:33] 2025-10-10 11:18:53,365 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | sum of square deviations: 48812429.20370371
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | sum of deviations: -36898010.68518518
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | mean x: 1760093311.574074
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | mean y: 2248779.796296296
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | -- intersect: 1332728390.7650418
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | intersect: 1332728390.7650418
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | chi2: 0.0986312581277859
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | -- intersect: 1332728390.7650418
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | current memory leak: -0.76 B/s (using 54 data points, chi2=0.10)
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | ..............................
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | . Timing measurements:
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | . get job = 0 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,366 | INFO     | . initial setup = 4 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,367 | INFO     | . payload setup = 38 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,367 | INFO     | . stage-in = 0 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,367 | INFO     | . payload execution = 3738 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,367 | INFO     | . stage-out = 1 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,367 | INFO     | . log creation = 0 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,367 | INFO     | ..............................
[2025-10-10 07:19:33] 2025-10-10 11:18:53,655 | INFO     | 
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | job summary report
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | --------------------------------------------------
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | PanDA job id: 6837364414
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | task id: 46676269
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | errors: (none)
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | pilot state: finished 
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | transexitcode: 0
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | exeerrorcode: 0
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | exeerrordiag: 
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | exitcode: 0
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | exitmsg: OK
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | cpuconsumptiontime: 24116 s
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | nevents: 400
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | neventsw: 0
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | pid: 1341698
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | pgrp: 1341698
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | corecount: 9
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | event service: False
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 12: 2348913, 23: 2348941, 27: 2349231, 34: 2349387, 3780: 2375229, 3782: 2384227, 3784: 2384283, 3810: 2384477}
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | --------------------------------------------------
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | 
[2025-10-10 07:19:33] 2025-10-10 11:18:53,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-10 07:19:33] 2025-10-10 11:18:53,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | job 6837364414 has completed (purged errors)
[2025-10-10 07:19:33] 2025-10-10 11:18:53,714 | INFO     | overall cleanup function is called
[2025-10-10 07:19:33] 2025-10-10 11:18:54,729 | INFO     | --- collectZombieJob: --- 10, [1341698]
[2025-10-10 07:19:33] 2025-10-10 11:18:54,729 | INFO     | zombie collector waiting for pid 1341698
[2025-10-10 07:19:33] 2025-10-10 11:18:54,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:19:33] 2025-10-10 11:18:54,729 | INFO     | collected zombie processes
[2025-10-10 07:19:33] 2025-10-10 11:18:54,729 | INFO     | will attempt to kill all subprocesses of pid=1341698
[2025-10-10 07:19:33] 2025-10-10 11:18:55,995 | INFO     | process IDs to be killed: [1341698] (in reverse order)
[2025-10-10 07:19:33] 2025-10-10 11:18:56,242 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:19:33] 2025-10-10 11:18:56,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:19:33] 2025-10-10 11:18:56,291 | INFO     | did not find any defunct processes belonging to 1341698
[2025-10-10 07:19:33] 2025-10-10 11:18:56,359 | INFO     | did not find any defunct processes belonging to 1341698
[2025-10-10 07:19:33] 2025-10-10 11:18:56,359 | INFO     | ready for new job
[2025-10-10 07:19:33] 2025-10-10 11:18:56,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:19:33] 2025-10-10 11:18:56,360 | INFO     | ***************************************
[2025-10-10 07:19:33] 2025-10-10 11:18:56,360 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:19:33] 2025-10-10 11:18:56,361 | INFO     | ***************************************
[2025-10-10 07:19:33] 2025-10-10 11:18:56,361 | INFO     | 
[2025-10-10 07:19:33] 2025-10-10 11:18:56,382 | INFO     | architecture information:
[2025-10-10 07:19:33] 2025-10-10 11:18:56,387 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:19:33] 2025-10-10 11:18:56,436 | INFO     | cat /etc/os-release:
[2025-10-10 07:19:33] NAME="CentOS Linux"
[2025-10-10 07:19:33] VERSION="7 (Core)"
[2025-10-10 07:19:33] ID="centos"
[2025-10-10 07:19:33] ID_LIKE="rhel fedora"
[2025-10-10 07:19:33] VERSION_ID="7"
[2025-10-10 07:19:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:19:33] ANSI_COLOR="0;31"
[2025-10-10 07:19:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:19:33] HOME_URL="https://www.centos.org/"
[2025-10-10 07:19:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:19:33] 
[2025-10-10 07:19:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:19:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:19:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:19:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:19:33] 
[2025-10-10 07:19:33] 2025-10-10 11:18:56,436 | INFO     | ***************************************
[2025-10-10 07:19:33] 2025-10-10 11:18:56,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-10 07:19:33] 2025-10-10 11:18:56,975 | INFO     | sufficient remaining disk space (167221657600 B)
[2025-10-10 07:19:33] 2025-10-10 11:18:56,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:19:33] 2025-10-10 11:18:56,976 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:19:33] 2025-10-10 11:18:56,976 | INFO     | update_server=False
[2025-10-10 07:19:33] 2025-10-10 11:18:56,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:19:33] 2025-10-10 11:18:56,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:19:33] 2025-10-10 11:18:56,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:19:33] 2025-10-10 11:18:57,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:19:33] 2025-10-10 11:18:57,092 | INFO     | aborting loop
[2025-10-10 07:19:33] 2025-10-10 11:18:57,460 | INFO     | all data control threads have been joined
[2025-10-10 07:19:33] 2025-10-10 11:18:57,981 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:58,013 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:58,083 | INFO     | all payload control threads have been joined
[2025-10-10 07:19:33] 2025-10-10 11:18:58,098 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:58,339 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:58,358 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:58,466 | INFO     | [data] control thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:58,511 | INFO     | all job control threads have been joined
[2025-10-10 07:19:33] 2025-10-10 11:18:58,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:19:33] 2025-10-10 11:18:58,808 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:58,983 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:59,067 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:59,094 | INFO     | [payload] control thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:59,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:59,421 | INFO     | [job] validate thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:59,427 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:59,517 | INFO     | [job] control thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:18:59,676 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:19:00,985 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:19:33] 2025-10-10 11:19:26,805 | INFO     | PID=1320798 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 07:19:33] 2025-10-10 11:19:26,805 | INFO     | .. there are 63 such processes running
[2025-10-10 07:19:33] 2025-10-10 11:19:26,806 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:19:33] 2025-10-10 11:19:26,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:19:33] 2025-10-10 11:19:26,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:19:33] 2025-10-10 11:19:27,074 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:19:33] 2025-10-10 11:19:27,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337132562240)>', '<ExcThread(monitor, started 140336858896128)>']
[2025-10-10 07:19:33] 2025-10-10 11:19:27,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:19:33] 2025-10-10 11:19:27,816 | INFO     | [monitor] control thread has ended
[2025-10-10 07:19:33] 2025-10-10 11:19:32,685 | INFO     | all workflow threads have been joined
[2025-10-10 07:19:33] 2025-10-10 11:19:32,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:19:33] 2025-10-10 11:19:32,685 | INFO     | traces error code: 0
[2025-10-10 07:19:33] 2025-10-10 11:19:32,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:19:33] 2025-10-10 11:19:32,808 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:19:33] 2025-10-10 11:19:32,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:19:33] 2025-10-10 11:19:32,846 [wrapper] pilotpid: 1320798
[2025-10-10 07:19:33] 2025-10-10 11:19:32,864 [wrapper] Pilot exit status: 0
[2025-10-10 07:19:33] 2025-10-10 11:19:32,978 [wrapper] pandaids: 6837364414
[2025-10-10 07:19:33] 2025-10-10 11:19:33,269 [wrapper] cleanup supervisor_pilot 2023452 1320799
[2025-10-10 07:19:33] 2025-10-10 11:19:33,289 [wrapper] Test setup, not cleaning
[2025-10-10 07:19:33] 2025-10-10 11:19:33,311 [wrapper] apfmon messages muted
[2025-10-10 07:19:33] 2025-10-10 11:19:33,347 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:19:33] 2025-10-10 11:19:33,374 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:19:33]  *** Error codes and diagnostics ***
[2025-10-10 07:19:33]     "exeErrorCode": 0,
[2025-10-10 07:19:33]     "exeErrorDiag": "",
[2025-10-10 07:19:33]     "pilotErrorCode": 0,
[2025-10-10 07:19:33]     "pilotErrorDiag": "",
[2025-10-10 07:19:33]  *** Listing of results directory ***
[2025-10-10 07:19:33] total 415924
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 17:44 pilot3.tar.gz
[2025-10-10 07:19:33] -rwx------. 1 boincer umatlas     36292 Oct  9 17:49 runpilot2-wrapper.sh
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 17:49 queuedata.json
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:19:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:13 run_atlas
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:13 job.xml
[2025-10-10 07:19:33] -rw-r--r--. 2 boincer umatlas 219239469 Oct 10 06:13 EVNT.46676267._001130.pool.root.1
[2025-10-10 07:19:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:13 start_atlas.sh
[2025-10-10 07:19:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:13 shared
[2025-10-10 07:19:33] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 06:13 input.tar.gz
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:13 boinc_lockfile
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 06:13 pandaJob.out
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas    975511 Oct 10 06:14 agis_schedconf.cvmfs.json
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas   1560580 Oct 10 06:14 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:19:33] drwx------. 5 boincer umatlas      4096 Oct 10 06:14 pilot3
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas      7162 Oct 10 07:13 init_data.xml
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas       530 Oct 10 07:17 boinc_task_state.xml
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas 201003029 Oct 10 07:17 HITS.46676269._026874.pool.root.1
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas      1031 Oct 10 07:18 memory_monitor_summary.json
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas    334188 Oct 10 07:18 log.46676269._026874.job.log.tgz.1
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas        95 Oct 10 07:18 pilot_heartbeat.json
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas      7777 Oct 10 07:18 heartbeat.json
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas      4825 Oct 10 07:19 pilotlog.txt
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas    544572 Oct 10 07:19 log.46676269._026874.job.log.1
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas        27 Oct 10 07:19 wrapper_checkpoint.txt
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas       357 Oct 10 07:19 output.list
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 07:19 boinc_mmap_file
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas       620 Oct 10 07:19 runtime_log
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas    901120 Oct 10 07:19 result.tar.gz
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas      8698 Oct 10 07:19 runtime_log.err
[2025-10-10 07:19:33] -rw-------. 1 boincer umatlas       651 Oct 10 07:19 RQWKDmygDR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLRbNDm4cmKUo.diag
[2025-10-10 07:19:33] -rw-r--r--. 1 boincer umatlas     22390 Oct 10 07:19 stderr.txt
[2025-10-10 07:19:34] HITS file was successfully produced:
[2025-10-10 07:19:34] -rw-------. 1 boincer umatlas 201003029 Oct 10 07:17 shared/HITS.pool.root.1
[2025-10-10 07:19:34]  *** Contents of shared directory: ***
[2025-10-10 07:19:34] total 411860
[2025-10-10 07:19:34] -rw-r--r--. 2 boincer umatlas 219239469 Oct 10 06:13 ATLAS.root_0
[2025-10-10 07:19:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:13 start_atlas.sh
[2025-10-10 07:19:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 06:13 input.tar.gz
[2025-10-10 07:19:34] -rw-------. 1 boincer umatlas 201003029 Oct 10 07:17 HITS.pool.root.1
[2025-10-10 07:19:34] -rw-------. 1 boincer umatlas    901120 Oct 10 07:19 result.tar.gz
07:19:35 (1313315): run_atlas exited; CPU time 24254.428934
07:19:35 (1313315): called boinc_finish(0)

</stderr_txt>
]]>

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