Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 09:09:04 (24428): vboxwrapper version 26210
2025-10-13 09:09:04 (24428): BOINC client version: 8.2.4
2025-10-13 09:09:05 (24428): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-13 09:09:05 (24428): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 09:09:05 (24428): Create VM. (boinc_f017081851f99951, slot#0)
2025-10-13 09:09:06 (24428): Setting Memory Size for VM. (4300MB)
2025-10-13 09:09:06 (24428): Setting CPU Count for VM. (3)
2025-10-13 09:09:06 (24428): Setting Chipset Options for VM.
2025-10-13 09:09:07 (24428): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 09:09:07 (24428): Setting Boot Options for VM.
2025-10-13 09:09:07 (24428): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 09:09:08 (24428): Enabling VM Network Access.
2025-10-13 09:09:08 (24428): Disabling USB Support for VM.
2025-10-13 09:09:08 (24428): Disabling COM Port Support for VM.
2025-10-13 09:09:09 (24428): Disabling LPT Port Support for VM.
2025-10-13 09:09:09 (24428): Disabling Audio Support for VM.
2025-10-13 09:09:09 (24428): Disabling Clipboard Support for VM.
2025-10-13 09:09:09 (24428): Disabling Drag and Drop Support for VM.
2025-10-13 09:09:10 (24428): Adding storage controller(s) to VM.
2025-10-13 09:09:10 (24428): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 09:09:12 (24428): Adding VirtualBox Guest Additions to VM.
2025-10-13 09:09:12 (24428): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 09:09:13 (24428): forwarding host port 58959 to guest port 80
2025-10-13 09:09:13 (24428): Enabling remote desktop for VM.
2025-10-13 09:09:13 (24428): Required extension pack not installed, remote desktop not enabled.
2025-10-13 09:09:13 (24428): Enabling shared directory for VM.
2025-10-13 09:09:14 (24428): Starting VM using VBoxManage interface. (boinc_f017081851f99951, slot#0)
2025-10-13 09:09:18 (24428): Successfully started VM. (PID = '10988')
2025-10-13 09:09:18 (24428): Reporting VM Process ID to BOINC.
2025-10-13 09:09:18 (24428): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-13 09:09:18 (24428): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 09:09:18 (24428): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 09:09:18 (24428): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 09:09:18 (24428): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 09:09:18 (24428): Detected: Web Application Enabled (http://localhost:58959)
2025-10-13 09:09:18 (24428): Preference change detected
2025-10-13 09:09:18 (24428): Setting CPU throttle for VM. (70%)
2025-10-13 09:09:18 (24428): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 09:09:20 (24428): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 09:09:20 (24428): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 09:09:23 (24428): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 09:09:23 (24428): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 09:09:23 (24428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 09:09:28 (24428): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 09:09:28 (24428): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 09:09:35 (24428): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000122 main     Log opened 2025-10-13T09:09:33.191708000Z
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000199 main     OS Product: Linux
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000217 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000232 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000247 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000247 main     Process ID: 1297
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000248 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 09:09:35 (24428): Guest Log: 00:00:00.000762 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 09:09:35 (24428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 09:09:35 (24428): Guest Log: [INFO] Mounting shared directory
2025-10-13 09:09:35 (24428): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 09:09:45 (24428): Guest Log: 00:00:10.003430 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 404 521 000ns (GuestNow=1 760 339 384 788 716 000 ns GuestLast=1 760 346 573 193 237 000 ns fSetTimeLastLoop=true )
2025-10-13 09:12:03 (24428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 09:12:03 (24428): Guest Log: [INFO] Detected branch: prod
2025-10-13 09:12:03 (24428): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 09:12:03 (24428): Guest Log: Copying input files
2025-10-13 09:12:04 (24428): Guest Log: Copied input files into RunAtlas.
2025-10-13 09:12:05 (24428): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 09:12:05 (24428): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 09:12:05 (24428): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 09:12:05 (24428): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 09:13:28 (24428): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 09:13:28 (24428): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 09:13:28 (24428): Guest Log: 2.6.3.0 1623 2 30236 151653 4 1 3120538 4096000 0 65024 0 0 n/a 1292 43 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 09:13:28 (24428): Guest Log: copied the webapp to /var/www
2025-10-13 09:13:28 (24428): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-13 09:13:28 (24428): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-13 09:13:29 (24428): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 09:13:29 (24428): Guest Log:  *** Starting ATLAS job. (PandaID=6837401746 taskID=46676269) ***
2025-10-13 09:22:56 (24428): Guest Log:  *** Job finished ***
2025-10-13 09:22:56 (24428): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:22,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:26,355 | INFO     | [data] queue_monitor thread has finished
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:48,718 | INFO     | [monitor] cgroup control has ended
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:49,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118165772096)>', '<ExcThread(monitor, started 140116999796480)>']
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:50,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:50,252 | INFO     | [monitor] control thread has ended
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,762 | INFO     | all workflow threads have been joined
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,762 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,762 | INFO     | traces error code: 0
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,930 [wrapper] ==== pilot stdout END ====
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,934 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,937 [wrapper] pilotpid: 6015
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,940 [wrapper] Pilot exit status: 0
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:54,993 [wrapper] pandaids: 6837401746
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:55,014 [wrapper] cleanup supervisor_pilot  6021 6016
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:55,018 [wrapper] Test setup, not cleaning
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:55,033 [wrapper] apfmon messages muted
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:55,037 [wrapper] ==== wrapper stdout END ====
2025-10-13 09:22:56 (24428): Guest Log: 2025-10-13 07:22:55,040 [wrapper] ==== wrapper stderr END ====
2025-10-13 09:22:56 (24428): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 09:22:56 (24428): Guest Log:     "exeErrorCode": 65,
2025-10-13 09:22:56 (24428): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-10-13 09:22:56 (24428): Guest Log:     "pilotErrorCode": 1305,
2025-10-13 09:22:56 (24428): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-10-13 09:22:56 (24428): Guest Log:  *** Listing of results directory ***
2025-10-13 09:22:56 (24428): Guest Log: total 3748
2025-10-13 09:22:56 (24428): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 10 04:08 pilot3.tar.gz
2025-10-13 09:22:56 (24428): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 10 04:10 runpilot2-wrapper.sh
2025-10-13 09:22:56 (24428): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 10 04:10 queuedata.json
2025-10-13 09:22:56 (24428): Guest Log: -rwxr-xr-x. 1 atlas atlas    8457 Oct 13 07:12 init_data.xml
2025-10-13 09:22:56 (24428): Guest Log: -rwxr-xr-x. 1 atlas atlas  569677 Oct 13 07:12 input.tar.gz
2025-10-13 09:22:56 (24428): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 13 07:12 start_atlas.sh
2025-10-13 09:22:56 (24428): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 13 07:12 EVNT.46676267._001319.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 09:22:56 (24428): Guest Log: -rw-r--r--. 1 atlas atlas    2551 Oct 13 07:13 pandaJob.out
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas  972849 Oct 13 07:15 agis_schedconf.cvmfs.json
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas       0 Oct 13 07:15 agis_ddmendpoints.agis.ALL.json
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas 1299207 Oct 13 07:15 cric_ddmendpoints.json
2025-10-13 09:22:56 (24428): Guest Log: drwx------. 5 atlas atlas    4096 Oct 13 07:15 pilot3
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas    1011 Oct 13 07:20 memory_monitor_summary.json
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas   23770 Oct 13 07:20 log.46676269._032375.job.log.tgz.1
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas      95 Oct 13 07:21 pilot_heartbeat.json
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas    8451 Oct 13 07:22 heartbeat.json
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas    4612 Oct 13 07:22 pilotlog.txt
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas  109835 Oct 13 07:22 log.46676269._032375.job.log.1
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas     188 Oct 13 07:22 output.list
2025-10-13 09:22:56 (24428): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 13 07:22 runtime_log
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas  153600 Oct 13 07:22 result.tar.gz
2025-10-13 09:22:56 (24428): Guest Log: -rw-r--r--. 1 atlas atlas    8470 Oct 13 07:22 runtime_log.err
2025-10-13 09:22:56 (24428): Guest Log: -rw-------. 1 atlas atlas     639 Oct 13 07:22 H4JKDmvdJR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvIcNDmggkEUm.diag
2025-10-13 09:22:56 (24428): Guest Log: Looking for outputfile HITS.46676269._032375.pool.root.1
2025-10-13 09:22:56 (24428): Guest Log: No HITS file was produced
2025-10-13 09:22:56 (24428): Guest Log: Successfully finished the ATLAS job!
2025-10-13 09:22:56 (24428): Guest Log: Copying the results back to the shared directory!
2025-10-13 09:22:56 (24428): Guest Log:  *** Contents of shared directory: ***
2025-10-13 09:22:56 (24428): Guest Log: total 216324
2025-10-13 09:22:56 (24428): Guest Log: -rwxrwxrwx. 1 root root 220756908 Oct 13 07:09 ATLAS.root_0
2025-10-13 09:22:56 (24428): Guest Log: -rwxrwxrwx. 1 root root      8457 Oct 13 07:09 init_data.xml
2025-10-13 09:22:56 (24428): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 10 10:09 input.tar.gz
2025-10-13 09:22:56 (24428): Guest Log: -rwxrwxrwx. 1 root root    153600 Oct 13 07:22 result.tar.gz
2025-10-13 09:22:56 (24428): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 10:09 start_atlas.sh
2025-10-13 09:22:56 (24428): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 09:22:56 (24428): VM Completion File Detected.
2025-10-13 09:22:56 (24428): Powering off VM.
2025-10-13 09:22:56 (24428): Successfully stopped VM.
2025-10-13 09:22:56 (24428): Deregistering VM. (boinc_f017081851f99951, slot#0)
2025-10-13 09:22:56 (24428): Removing network bandwidth throttle group from VM.
2025-10-13 09:22:56 (24428): Removing VM from VirtualBox.
2025-10-13 09:23:02 (24428): called boinc_finish(0)

</stderr_txt>
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