Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:07:20 (829663): wrapper (7.7.26015): starting
03:07:20 (829663): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 03:07:20] Arguments: --nthreads 12
[2025-10-10 03:07:20] Threads: 12
[2025-10-10 03:07:20] Checking for CVMFS
[2025-10-10 03:07:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 03:07:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 03:07:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 03:07:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 03:07:22] 2.11.5.0 2572 28436 229544 151541 1 531 44630162 45568001 19617 130560 0 301463142 99.860 125137121 21793 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 03:07:22] CVMFS is ok
[2025-10-10 03:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 03:07:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 03:07:22] Further information can be found at the LHC@home message board.
[2025-10-10 03:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 03:07:22] Checking for apptainer binary...
[2025-10-10 03:07:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 03:07:22] Running /usr/bin/apptainer --version
[2025-10-10 03:07:22] apptainer version 1.4.1-1.el9
[2025-10-10 03:07:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 03:07:23] wns0095.triumf.lcg
[2025-10-10 03:07:23] apptainer works
[2025-10-10 03:07:23] Set ATHENA_PROC_NUMBER=12
[2025-10-10 03:07:23] Set ATHENA_CORE_NUMBER=12
[2025-10-10 03:07:23] Starting ATLAS job with PandaID=6837509302
[2025-10-10 03:07:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 03:13:04]  *** The last 200 lines of the pilot log: ***
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | INFO     | could have reported an average CPU frequency of 2654 MHz (4 samples)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | INFO     | ..............................
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . Timing measurements:
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . get job = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . initial setup = 3 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . payload setup = 25 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . stage-in = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . payload execution = 48 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . stage-out = 1 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . log creation = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | ..............................
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837509302/pilotlog.txt
[2025-10-10 03:13:04] 2025-10-10 10:12:09,332 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 03:13:04] - Log from pilotlog.txt -
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837509302/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | INFO     | extracted standard info from prmon json
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | WARNING  | wrong length of table data, x=[1760090965.0], y=[22942.0] (must be same and length>=4)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | INFO     | could have reported an average CPU frequency of 2654 MHz (4 samples)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | INFO     | ..............................
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . Timing measurements:
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . get job = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . initial setup = 3 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . payload setup = 25 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . stage-in = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . payload execution = 48 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . stage-out = 1 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . log creation = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | ..............................
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837509302/pilotlog.txt
[2025-10-10 03:13:04] 2025-10-10 10:12:09,332 | WARNING  | 
[2025-10-10 03:13:04] [begin log extracts]
[2025-10-10 03:13:04] - Log from pilotlog.txt -
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837509302/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | INFO     | extracted standard info from prmon json
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 03:13:04] 2025-10-10 10:12:09,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | WARNING  | wrong length of table data, x=[1760090965.0], y=[22942.0] (must be same and length>=4)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | INFO     | could have reported an average CPU frequency of 2654 MHz (4 samples)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,211 | INFO     | ..............................
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . Timing measurements:
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . get job = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . initial setup = 3 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . payload setup = 25 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . stage-in = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . payload execution = 48 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . stage-out = 1 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | . log creation = 0 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | ..............................
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 03:13:04] 2025-10-10 10:12:09,212 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837509302/pilotlog.txt
[2025-10-10 03:13:04] [end log extracts]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,332 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,333 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 03:13:04] 2025-10-10 10:12:09,454 | INFO     | 
[2025-10-10 03:13:04] 2025-10-10 10:12:09,454 | INFO     | job summary report
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | --------------------------------------------------
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | PanDA job id: 6837509302
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | task id: 46676269
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 03:09:45,618 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | pilot state: failed 
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | transexitcode: 65
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | exeerrorcode: 65
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | exitcode: 65
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | cpuconsumptiontime: 18 s
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | nevents: 0
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | neventsw: 0
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | pid: 847532
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | pgrp: 847532
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | corecount: 12
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | event service: False
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | sizes: {0: 2348682, 1: 2348881, 12: 2348881, 17: 2349171, 23: 2349199, 77: 2372560, 79: 2376908, 211: 2377046}
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | --------------------------------------------------
[2025-10-10 03:13:04] 2025-10-10 10:12:09,455 | INFO     | 
[2025-10-10 03:13:04] 2025-10-10 10:12:09,456 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 03:13:04] 2025-10-10 10:12:09,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 03:13:04] 2025-10-10 10:12:09,488 | INFO     | job 6837509302 has completed (purged errors)
[2025-10-10 03:13:04] 2025-10-10 10:12:09,488 | INFO     | overall cleanup function is called
[2025-10-10 03:13:04] 2025-10-10 10:12:10,389 | INFO     | PID=835539 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 03:13:04] 2025-10-10 10:12:10,389 | INFO     | .. there are 42 such processes running
[2025-10-10 03:13:04] 2025-10-10 10:12:10,495 | INFO     | --- collectZombieJob: --- 10, [847532]
[2025-10-10 03:13:04] 2025-10-10 10:12:10,495 | INFO     | zombie collector waiting for pid 847532
[2025-10-10 03:13:04] 2025-10-10 10:12:10,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 03:13:04] 2025-10-10 10:12:10,496 | INFO     | collected zombie processes
[2025-10-10 03:13:04] 2025-10-10 10:12:10,496 | INFO     | will attempt to kill all subprocesses of pid=847532
[2025-10-10 03:13:04] 2025-10-10 10:12:11,374 | INFO     | process IDs to be killed: [847532] (in reverse order)
[2025-10-10 03:13:04] 2025-10-10 10:12:11,627 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 03:13:04] 2025-10-10 10:12:11,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 03:13:04] 2025-10-10 10:12:11,639 | INFO     | did not find any defunct processes belonging to 847532
[2025-10-10 03:13:04] 2025-10-10 10:12:11,653 | INFO     | did not find any defunct processes belonging to 847532
[2025-10-10 03:13:04] 2025-10-10 10:12:11,654 | INFO     | ready for new job
[2025-10-10 03:13:04] 2025-10-10 10:12:11,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 03:13:04] 2025-10-10 10:12:11,655 | INFO     | ***************************************
[2025-10-10 03:13:04] 2025-10-10 10:12:11,655 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 03:13:04] 2025-10-10 10:12:11,655 | INFO     | ***************************************
[2025-10-10 03:13:04] 2025-10-10 10:12:11,655 | INFO     | 
[2025-10-10 03:13:04] 2025-10-10 10:12:11,660 | INFO     | architecture information:
[2025-10-10 03:13:04] 2025-10-10 10:12:11,661 | INFO     | executing command: cat /etc/os-release
[2025-10-10 03:13:04] 2025-10-10 10:12:11,681 | INFO     | cat /etc/os-release:
[2025-10-10 03:13:04] NAME="CentOS Linux"
[2025-10-10 03:13:04] VERSION="7 (Core)"
[2025-10-10 03:13:04] ID="centos"
[2025-10-10 03:13:04] ID_LIKE="rhel fedora"
[2025-10-10 03:13:04] VERSION_ID="7"
[2025-10-10 03:13:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 03:13:04] ANSI_COLOR="0;31"
[2025-10-10 03:13:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 03:13:04] HOME_URL="https://www.centos.org/"
[2025-10-10 03:13:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 03:13:04] 
[2025-10-10 03:13:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 03:13:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 03:13:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 03:13:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 03:13:04] 
[2025-10-10 03:13:04] 2025-10-10 10:12:11,681 | INFO     | ***************************************
[2025-10-10 03:13:04] 2025-10-10 10:12:12,186 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 03:13:04] 2025-10-10 10:12:12,244 | INFO     | sufficient remaining disk space (1696733331456 B)
[2025-10-10 03:13:04] 2025-10-10 10:12:12,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 03:13:04] 2025-10-10 10:12:12,245 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 03:13:04] 2025-10-10 10:12:12,245 | INFO     | update_server=False
[2025-10-10 03:13:04] 2025-10-10 10:12:12,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 03:13:04] 2025-10-10 10:12:12,726 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 03:13:04] 2025-10-10 10:12:12,726 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 03:13:04] 2025-10-10 10:12:12,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 03:13:04] 2025-10-10 10:12:12,726 | INFO     | will abort loop
[2025-10-10 03:13:04] 2025-10-10 10:12:12,938 | INFO     | all payload control threads have been joined
[2025-10-10 03:13:04] 2025-10-10 10:12:12,998 | INFO     | all data control threads have been joined
[2025-10-10 03:13:04] 2025-10-10 10:12:13,263 | INFO     | [job] retrieve thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,276 | INFO     | [job] validate thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 03:13:04] 2025-10-10 10:12:13,388 | INFO     | [payload] failed_post thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,475 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,579 | INFO     | [data] copytool_in thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,706 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,732 | INFO     | [job] job monitor thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,828 | INFO     | [payload] validate_post thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,948 | INFO     | [payload] control thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,951 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:13,979 | INFO     | all job control threads have been joined
[2025-10-10 03:13:04] 2025-10-10 10:12:14,004 | INFO     | [data] control thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:14,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 03:13:04] 2025-10-10 10:12:14,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 03:13:04] 2025-10-10 10:12:14,985 | INFO     | [job] control thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:15,392 | INFO     | [data] copytool_out thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:15,483 | INFO     | [job] queue monitor thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:18,641 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 03:13:04] 2025-10-10 10:12:42,828 | INFO     | PID=835539 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 03:13:04] 2025-10-10 10:12:42,829 | INFO     | .. there are 42 such processes running
[2025-10-10 03:13:04] 2025-10-10 10:12:42,829 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 03:13:04] 2025-10-10 10:12:42,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 03:13:04] 2025-10-10 10:12:42,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 03:13:04] 2025-10-10 10:12:56,538 | INFO     | [monitor] cgroup control has ended
[2025-10-10 03:13:04] 2025-10-10 10:12:58,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147155130176)>', '<ExcThread(monitor, started 140146234083072)>']
[2025-10-10 03:13:04] 2025-10-10 10:12:58,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 03:13:04] 2025-10-10 10:12:58,971 | INFO     | [monitor] control thread has ended
[2025-10-10 03:13:04] 2025-10-10 10:13:03,294 | INFO     | all workflow threads have been joined
[2025-10-10 03:13:04] 2025-10-10 10:13:03,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 03:13:04] 2025-10-10 10:13:03,295 | INFO     | traces error code: 0
[2025-10-10 03:13:04] 2025-10-10 10:13:03,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 03:13:04] 2025-10-10 10:13:03,493 [wrapper] ==== pilot stdout END ====
[2025-10-10 03:13:04] 2025-10-10 10:13:03,506 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 03:13:04] 2025-10-10 10:13:03,542 [wrapper] pilotpid: 835539
[2025-10-10 03:13:04] 2025-10-10 10:13:03,579 [wrapper] Pilot exit status: 0
[2025-10-10 03:13:04] 2025-10-10 10:13:03,773 [wrapper] pandaids: 6837509302
[2025-10-10 03:13:04] 2025-10-10 10:13:03,945 [wrapper] cleanup supervisor_pilot  835555 835540
[2025-10-10 03:13:04] 2025-10-10 10:13:03,952 [wrapper] Test setup, not cleaning
[2025-10-10 03:13:04] 2025-10-10 10:13:03,955 [wrapper] apfmon messages muted
[2025-10-10 03:13:04] 2025-10-10 10:13:03,963 [wrapper] ==== wrapper stdout END ====
[2025-10-10 03:13:04] 2025-10-10 10:13:03,995 [wrapper] ==== wrapper stderr END ====
[2025-10-10 03:13:04]  *** Error codes and diagnostics ***
[2025-10-10 03:13:04]     "exeErrorCode": 65,
[2025-10-10 03:13:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 03:13:04]     "pilotErrorCode": 1305,
[2025-10-10 03:13:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 03:13:04]  *** Listing of results directory ***
[2025-10-10 03:13:04] total 218456
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc    557409 Oct 10 00:12 pilot3.tar.gz
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc      5112 Oct 10 00:18 queuedata.json
[2025-10-10 03:13:04] -rwx------. 1 boinc boinc     36292 Oct 10 00:19 runpilot2-wrapper.sh
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc       100 Oct 10 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 03:13:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 03:07 run_atlas
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc       105 Oct 10 03:07 job.xml
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc      6594 Oct 10 03:07 init_data.xml
[2025-10-10 03:13:04] -rw-r--r--. 2 boinc boinc 219566911 Oct 10 03:07 EVNT.46676267._001406.pool.root.1
[2025-10-10 03:13:04] -rw-r--r--. 2 boinc boinc     15120 Oct 10 03:07 start_atlas.sh
[2025-10-10 03:13:04] drwxrwx--x. 2 boinc boinc      4096 Oct 10 03:07 shared
[2025-10-10 03:13:04] -rw-r--r--. 2 boinc boinc    569684 Oct 10 03:07 input.tar.gz
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc         0 Oct 10 03:07 boinc_lockfile
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc      2549 Oct 10 03:07 pandaJob.out
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc    975511 Oct 10 03:07 agis_schedconf.cvmfs.json
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc   1560580 Oct 10 03:07 agis_ddmendpoints.agis.ALL.json
[2025-10-10 03:13:04] drwx------. 5 boinc boinc      4096 Oct 10 03:07 pilot3
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc       524 Oct 10 03:09 boinc_task_state.xml
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc       962 Oct 10 03:09 memory_monitor_summary.json
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc     22509 Oct 10 03:09 log.46676269._034575.job.log.tgz.1
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc        95 Oct 10 03:11 pilot_heartbeat.json
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc      8396 Oct 10 03:12 heartbeat.json
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc      5008 Oct 10 03:13 pilotlog.txt
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc     92792 Oct 10 03:13 log.46676269._034575.job.log.1
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc        22 Oct 10 03:13 wrapper_checkpoint.txt
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc      8192 Oct 10 03:13 boinc_mmap_file
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc       188 Oct 10 03:13 output.list
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc       620 Oct 10 03:13 runtime_log
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc    133120 Oct 10 03:13 result.tar.gz
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc      8528 Oct 10 03:13 runtime_log.err
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc       645 Oct 10 03:13 jn5MDmdaMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNjcNDm3B9HHo.diag
[2025-10-10 03:13:04] -rw-r--r--. 1 boinc boinc     20547 Oct 10 03:13 stderr.txt
[2025-10-10 03:13:04] No HITS result produced
[2025-10-10 03:13:04]  *** Contents of shared directory: ***
[2025-10-10 03:13:04] total 215132
[2025-10-10 03:13:04] -rw-r--r--. 2 boinc boinc 219566911 Oct 10 03:07 ATLAS.root_0
[2025-10-10 03:13:04] -rw-r--r--. 2 boinc boinc     15120 Oct 10 03:07 start_atlas.sh
[2025-10-10 03:13:04] -rw-r--r--. 2 boinc boinc    569684 Oct 10 03:07 input.tar.gz
[2025-10-10 03:13:04] -rw-------. 1 boinc boinc    133120 Oct 10 03:13 result.tar.gz
03:13:06 (829663): run_atlas exited; CPU time 28.714951
03:13:06 (829663): called boinc_finish(0)

</stderr_txt>
]]>

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