Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 00:52:23 (17080): vboxwrapper version 26210
2025-10-11 00:52:23 (17080): BOINC client version: 8.2.4
2025-10-11 00:52:26 (17080): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-11 00:52:26 (17080): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 00:52:26 (17080): Create VM. (boinc_174d4dde024653d4, slot#0)
2025-10-11 00:52:27 (17080): Setting Memory Size for VM. (4400MB)
2025-10-11 00:52:27 (17080): Setting CPU Count for VM. (4)
2025-10-11 00:52:28 (17080): Setting Chipset Options for VM.
2025-10-11 00:52:28 (17080): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 00:52:28 (17080): Setting Boot Options for VM.
2025-10-11 00:52:29 (17080): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 00:52:29 (17080): Enabling VM Network Access.
2025-10-11 00:52:30 (17080): Disabling USB Support for VM.
2025-10-11 00:52:30 (17080): Disabling COM Port Support for VM.
2025-10-11 00:52:30 (17080): Disabling LPT Port Support for VM.
2025-10-11 00:52:31 (17080): Disabling Audio Support for VM.
2025-10-11 00:52:31 (17080): Disabling Clipboard Support for VM.
2025-10-11 00:52:31 (17080): Disabling Drag and Drop Support for VM.
2025-10-11 00:52:32 (17080): Adding storage controller(s) to VM.
2025-10-11 00:52:32 (17080): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 00:52:33 (17080): Adding VirtualBox Guest Additions to VM.
2025-10-11 00:52:34 (17080): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 00:52:34 (17080): forwarding host port 64746 to guest port 80
2025-10-11 00:52:34 (17080): Enabling remote desktop for VM.
2025-10-11 00:52:35 (17080): Required extension pack not installed, remote desktop not enabled.
2025-10-11 00:52:35 (17080): Enabling shared directory for VM.
2025-10-11 00:52:35 (17080): Starting VM using VBoxManage interface. (boinc_174d4dde024653d4, slot#0)
2025-10-11 00:52:46 (17080): Successfully started VM. (PID = '16016')
2025-10-11 00:52:46 (17080): Reporting VM Process ID to BOINC.
2025-10-11 00:52:46 (17080): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-11 00:52:46 (17080): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 00:52:46 (17080): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 00:52:46 (17080): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 00:52:46 (17080): Detected: Web Application Enabled (http://localhost:64746)
2025-10-11 00:52:46 (17080): Preference change detected
2025-10-11 00:52:46 (17080): Setting CPU throttle for VM. (100%)
2025-10-11 00:52:46 (17080): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 00:52:48 (17080): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 00:52:48 (17080): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 00:52:52 (17080): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 00:52:52 (17080): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 00:52:52 (17080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 00:53:02 (17080): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 00:53:02 (17080): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-11 00:53:17 (17080): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.000381 main     Log opened 2025-10-11T00:53:15.174121000Z
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.000814 main     OS Product: Linux
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.000873 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.000919 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.000985 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.000986 main     Process ID: 1309
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.000987 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 00:53:17 (17080): Guest Log: 00:00:00.004406 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 00:53:17 (17080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 00:53:17 (17080): Guest Log: [INFO] Mounting shared directory
2025-10-11 00:53:18 (17080): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 00:53:24 (17080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 00:53:24 (17080): Guest Log: [INFO] Detected branch: prod
2025-10-11 00:53:25 (17080): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 00:53:25 (17080): Guest Log: Copying input files
2025-10-11 00:53:27 (17080): Guest Log: 00:00:10.009890 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 494 126 000ns (GuestNow=1 760 133 206 687 181 000 ns GuestLast=1 760 143 995 181 307 000 ns fSetTimeLastLoop=true )
2025-10-11 00:53:28 (17080): Guest Log: Copied input files into RunAtlas.
2025-10-11 00:53:28 (17080): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 00:53:28 (17080): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 00:53:28 (17080): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 00:53:28 (17080): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 00:53:37 (17080): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 00:53:38 (17080): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 00:53:38 (17080): Guest Log: 2.6.3.0 1587 0 30164 151562 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 00:53:40 (17080): Guest Log: copied the webapp to /var/www
2025-10-11 00:53:40 (17080): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-11 00:53:40 (17080): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-11 00:53:40 (17080): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 00:53:40 (17080): Guest Log:  *** Starting ATLAS job. (PandaID=6837401258 taskID=46676269) ***
2025-10-11 02:38:09 (17080): Status Report: Elapsed Time: '6000.425600'
2025-10-11 02:38:09 (17080): Status Report: CPU Time: '17919.265625'
2025-10-11 04:23:20 (17080): Status Report: Elapsed Time: '12000.606354'
2025-10-11 04:23:20 (17080): Status Report: CPU Time: '38337.687500'
2025-10-11 06:08:59 (17080): Status Report: Elapsed Time: '18000.841875'
2025-10-11 06:08:59 (17080): Status Report: CPU Time: '61289.875000'
2025-10-11 06:39:28 (17080): Guest Log:  *** Job finished ***
2025-10-11 06:39:28 (17080): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:07,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:07,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:18,693 | INFO     | [monitor] cgroup control has ended
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:20,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229328160576)>', '<ExcThread(monitor, started 140228593444608)>']
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:21,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:21,018 | INFO     | [monitor] control thread has ended
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,197 | INFO     | all workflow threads have been joined
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,197 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,198 | INFO     | traces error code: 0
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,331 [wrapper] ==== pilot stdout END ====
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,343 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,353 [wrapper] pilotpid: 5988
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,361 [wrapper] Pilot exit status: 0
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,499 [wrapper] pandaids: 6837401258
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,553 [wrapper] cleanup supervisor_pilot 20815 5989
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,565 [wrapper] Test setup, not cleaning
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,574 [wrapper] apfmon messages muted
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,585 [wrapper] ==== wrapper stdout END ====
2025-10-11 06:39:28 (17080): Guest Log: 2025-10-11 03:39:25,594 [wrapper] ==== wrapper stderr END ====
2025-10-11 06:39:28 (17080): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 06:39:28 (17080): Guest Log:     "exeErrorCode": 0,
2025-10-11 06:39:28 (17080): Guest Log:     "exeErrorDiag": "",
2025-10-11 06:39:28 (17080): Guest Log:     "pilotErrorCode": 0,
2025-10-11 06:39:28 (17080): Guest Log:     "pilotErrorDiag": "",
2025-10-11 06:39:28 (17080): Guest Log:  *** Listing of results directory ***
2025-10-11 06:39:28 (17080): Guest Log: total 207340
2025-10-11 06:39:28 (17080): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 04:08 pilot3.tar.gz
2025-10-11 06:39:28 (17080): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 04:12 runpilot2-wrapper.sh
2025-10-11 06:39:28 (17080): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 04:12 queuedata.json
2025-10-11 06:39:28 (17080): Guest Log: -rwxr-xr-x. 1 atlas atlas     12094 Oct 10 21:53 init_data.xml
2025-10-11 06:39:28 (17080): Guest Log: -rwxr-xr-x. 1 atlas atlas    569687 Oct 10 21:53 input.tar.gz
2025-10-11 06:39:28 (17080): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 21:53 start_atlas.sh
2025-10-11 06:39:28 (17080): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 21:53 EVNT.46676267._001312.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 06:39:28 (17080): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Oct 10 21:53 pandaJob.out
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas    975517 Oct 10 21:54 agis_schedconf.cvmfs.json
2025-10-11 06:39:28 (17080): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 21:54 pilot3
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas 202170402 Oct 11 03:37 HITS.46676269._032211.pool.root.1
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 11 03:38 memory_monitor_summary.json
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 03:38 agis_ddmendpoints.agis.ALL.json
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas    485232 Oct 11 03:38 log.46676269._032211.job.log.tgz.1
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 03:38 pilot_heartbeat.json
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas      7828 Oct 11 03:38 heartbeat.json
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 11 03:39 pilotlog.txt
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas   2668924 Oct 11 03:39 log.46676269._032211.job.log.1
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 03:39 output.list
2025-10-11 06:39:28 (17080): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 03:39 runtime_log
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas   3174400 Oct 11 03:39 result.tar.gz
2025-10-11 06:39:28 (17080): Guest Log: -rw-r--r--. 1 atlas atlas      8652 Oct 11 03:39 runtime_log.err
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas       663 Oct 11 03:39 l8IMDmsfJR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkJPMDmLPG9an.diag
2025-10-11 06:39:28 (17080): Guest Log: Looking for outputfile HITS.46676269._032211.pool.root.1
2025-10-11 06:39:28 (17080): Guest Log: HITS file was successfully produced
2025-10-11 06:39:28 (17080): Guest Log: -rw-------. 1 atlas atlas 202170402 Oct 11 03:37 /home/atlas/RunAtlas/HITS.46676269._032211.pool.root.1
2025-10-11 06:39:33 (17080): Guest Log: Successfully finished the ATLAS job!
2025-10-11 06:39:33 (17080): Guest Log: Copying the results back to the shared directory!
2025-10-11 06:39:33 (17080): Guest Log:  *** Contents of shared directory: ***
2025-10-11 06:39:33 (17080): Guest Log: total 418136
2025-10-11 06:39:33 (17080): Guest Log: -rwxrwxrwx. 1 root root 222218499 Oct 10 21:52 ATLAS.root_0
2025-10-11 06:39:33 (17080): Guest Log: -rwxrwxrwx. 1 root root 202170402 Oct 11 03:39 HITS.pool.root.1
2025-10-11 06:39:33 (17080): Guest Log: -rwxrwxrwx. 1 root root     12094 Oct 10 21:52 init_data.xml
2025-10-11 06:39:33 (17080): Guest Log: -rwxrwxrwx. 1 root root    569687 Oct 10 09:49 input.tar.gz
2025-10-11 06:39:33 (17080): Guest Log: -rwxrwxrwx. 1 root root   3174400 Oct 11 03:39 result.tar.gz
2025-10-11 06:39:33 (17080): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 09:49 start_atlas.sh
2025-10-11 06:39:33 (17080): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 06:39:33 (17080): VM Completion File Detected.
2025-10-11 06:39:33 (17080): Powering off VM.
2025-10-11 06:39:36 (17080): Successfully stopped VM.
2025-10-11 06:39:36 (17080): Deregistering VM. (boinc_174d4dde024653d4, slot#0)
2025-10-11 06:39:36 (17080): Removing network bandwidth throttle group from VM.
2025-10-11 06:39:37 (17080): Removing VM from VirtualBox.
2025-10-11 06:39:42 (17080): called boinc_finish(0)

</stderr_txt>
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