Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:03:28 (1500870): wrapper (7.7.26015): starting
06:03:28 (1500870): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 06:03:28] Arguments: --nthreads 10
[2025-10-10 06:03:28] Threads: 10
[2025-10-10 06:03:28] Checking for CVMFS
[2025-10-10 06:03:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:03:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:03:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:03:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:03:31] 2.13.2.0 112940 135087 415124 151541 2 731 32109541 40960000 58017 16776704 0 375346851 99.819 182414507 31616 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 06:03:31] CVMFS is ok
[2025-10-10 06:03:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:03:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:03:31] Further information can be found at the LHC@home message board.
[2025-10-10 06:03:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:03:31] Checking for apptainer binary...
[2025-10-10 06:03:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:03:31] Running /usr/bin/apptainer --version
[2025-10-10 06:03:31] apptainer version 1.4.3-1.el9
[2025-10-10 06:03:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:03:32] c8-7-3.aglt2.org
[2025-10-10 06:03:32] apptainer works
[2025-10-10 06:03:32] Set ATHENA_PROC_NUMBER=10
[2025-10-10 06:03:32] Set ATHENA_CORE_NUMBER=10
[2025-10-10 06:03:32] Starting ATLAS job with PandaID=6837364065
[2025-10-10 06:03:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 08:09:24]  *** The last 200 lines of the pilot log: ***
[2025-10-10 08:09:24] 2025-10-10 12:08:47,391 | INFO     | mean x: 1760094472.0588236
[2025-10-10 08:09:24] 2025-10-10 12:08:47,391 | INFO     | mean y: 2131468.168067227
[2025-10-10 08:09:24] 2025-10-10 12:08:47,391 | INFO     | -- intersect: -113556957028.0473
[2025-10-10 08:09:24] 2025-10-10 12:08:47,391 | INFO     | intersect: -113556957028.0473
[2025-10-10 08:09:24] 2025-10-10 12:08:47,391 | INFO     | chi2: 4.754373815002825
[2025-10-10 08:09:24] 2025-10-10 12:08:47,391 | INFO     | sum of square deviations: 459376824.07017523
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | sum of deviations: 38914378195.82457
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | mean x: 1760094319.5614035
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | mean y: 2143475.596491228
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | -- intersect: -149097620428.19122
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | intersect: -149097620428.19122
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | chi2: 4.1064854213532795
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | current chi2=4.1064854213532795 (change=13.62720767990686 %)
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | right removable region: 113
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | sum of square deviations: 459372554.07017523
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | sum of deviations: 3679099156.8947363
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | mean x: 1760094624.5614035
[2025-10-10 08:09:24] 2025-10-10 12:08:47,392 | INFO     | mean y: 2203697.6578947366
[2025-10-10 08:09:24] 2025-10-10 12:08:47,423 | INFO     | -- intersect: -14094334268.973846
[2025-10-10 08:09:24] 2025-10-10 12:08:47,423 | INFO     | intersect: -14094334268.973846
[2025-10-10 08:09:24] 2025-10-10 12:08:47,423 | INFO     | chi2: 1.3158439716435368
[2025-10-10 08:09:24] 2025-10-10 12:08:47,423 | INFO     | current chi2=1.3158439716435368 (change=72.32350625246839 %)
[2025-10-10 08:09:24] 2025-10-10 12:08:47,423 | INFO     | sum of square deviations: 401536776.550458
[2025-10-10 08:09:24] 2025-10-10 12:08:47,423 | INFO     | sum of deviations: -8175560295.559633
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | mean x: 1760094777.0642202
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | mean y: 2234729.651376147
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | -- intersect: 35838954592.29607
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | intersect: 35838954592.29607
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | chi2: 0.7314083189895666
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | current chi2=0.7314083189895666 (change=44.41526999010292 %)
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | sum of square deviations: 348770861.52884686
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | sum of deviations: -8523616097.1923065
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | mean x: 1760094929.5673077
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | mean y: 2235677.8846153845
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | -- intersect: 43017220956.4229
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | intersect: 43017220956.4229
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | chi2: 0.7258293631434174
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | current chi2=0.7258293631434174 (change=0.7627689898108454 %)
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | left removable region: 30
[2025-10-10 08:09:24] 2025-10-10 12:08:47,424 | INFO     | sum of square deviations: 177286500.69879472
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | sum of deviations: -562804648.1084341
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | mean x: 1760095204.060241
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | mean y: 2247832.421686747
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | -- intersect: 5589755950.941401
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | intersect: 5589755950.941401
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | chi2: 0.025054202896721188
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | -- intersect: 5589755950.941401
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | current memory leak: -3.17 B/s (using 83 data points, chi2=0.03)
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | ..............................
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | . Timing measurements:
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | . get job = 0 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,425 | INFO     | . initial setup = 6 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,426 | INFO     | . payload setup = 48 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,426 | INFO     | . stage-in = 0 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,426 | INFO     | . payload execution = 7242 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,426 | INFO     | . stage-out = 1 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,426 | INFO     | . log creation = 0 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,426 | INFO     | ..............................
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | 
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | job summary report
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | --------------------------------------------------
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | PanDA job id: 6837364065
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | task id: 46676269
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | errors: (none)
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | pilot state: finished 
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | transexitcode: 0
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | exeerrorcode: 0
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | exeerrordiag: 
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | exitcode: 0
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | exitmsg: OK
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | cpuconsumptiontime: 23873 s
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | nevents: 400
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | neventsw: 0
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | pid: 1548356
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | pgrp: 1548356
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | corecount: 10
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | event service: False
[2025-10-10 08:09:24] 2025-10-10 12:08:47,852 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 42: 2349387, 45: 2349443, 7296: 2376832, 7298: 2385830, 7299: 2385886, 7341: 238
[2025-10-10 08:09:24] 2025-10-10 12:08:47,853 | INFO     | --------------------------------------------------
[2025-10-10 08:09:24] 2025-10-10 12:08:47,853 | INFO     | 
[2025-10-10 08:09:24] 2025-10-10 12:08:47,853 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-10 08:09:24] 2025-10-10 12:08:48,040 | INFO     | PID=1517396 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 08:09:24] 2025-10-10 12:08:48,040 | INFO     | .. there are 78 such processes running
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | job 6837364065 has completed (purged errors)
[2025-10-10 08:09:24] 2025-10-10 12:08:48,209 | INFO     | overall cleanup function is called
[2025-10-10 08:09:24] 2025-10-10 12:08:49,216 | INFO     | --- collectZombieJob: --- 10, [1548356]
[2025-10-10 08:09:24] 2025-10-10 12:08:49,216 | INFO     | zombie collector waiting for pid 1548356
[2025-10-10 08:09:24] 2025-10-10 12:08:49,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 08:09:24] 2025-10-10 12:08:49,216 | INFO     | collected zombie processes
[2025-10-10 08:09:24] 2025-10-10 12:08:49,216 | INFO     | will attempt to kill all subprocesses of pid=1548356
[2025-10-10 08:09:24] 2025-10-10 12:08:51,325 | INFO     | process IDs to be killed: [1548356] (in reverse order)
[2025-10-10 08:09:24] 2025-10-10 12:08:51,620 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 08:09:24] 2025-10-10 12:08:51,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 08:09:24] 2025-10-10 12:08:51,684 | INFO     | did not find any defunct processes belonging to 1548356
[2025-10-10 08:09:24] 2025-10-10 12:08:51,750 | INFO     | did not find any defunct processes belonging to 1548356
[2025-10-10 08:09:24] 2025-10-10 12:08:51,750 | INFO     | ready for new job
[2025-10-10 08:09:24] 2025-10-10 12:08:51,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 08:09:24] 2025-10-10 12:08:51,764 | INFO     | ***************************************
[2025-10-10 08:09:24] 2025-10-10 12:08:51,764 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 08:09:24] 2025-10-10 12:08:51,764 | INFO     | ***************************************
[2025-10-10 08:09:24] 2025-10-10 12:08:51,764 | INFO     | 
[2025-10-10 08:09:24] 2025-10-10 12:08:51,768 | INFO     | architecture information:
[2025-10-10 08:09:24] 2025-10-10 12:08:51,780 | INFO     | executing command: cat /etc/os-release
[2025-10-10 08:09:24] 2025-10-10 12:08:51,837 | INFO     | cat /etc/os-release:
[2025-10-10 08:09:24] NAME="CentOS Linux"
[2025-10-10 08:09:24] VERSION="7 (Core)"
[2025-10-10 08:09:24] ID="centos"
[2025-10-10 08:09:24] ID_LIKE="rhel fedora"
[2025-10-10 08:09:24] VERSION_ID="7"
[2025-10-10 08:09:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 08:09:24] ANSI_COLOR="0;31"
[2025-10-10 08:09:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 08:09:24] HOME_URL="https://www.centos.org/"
[2025-10-10 08:09:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 08:09:24] 
[2025-10-10 08:09:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 08:09:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 08:09:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 08:09:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 08:09:24] 
[2025-10-10 08:09:24] 2025-10-10 12:08:51,838 | INFO     | ***************************************
[2025-10-10 08:09:24] 2025-10-10 12:08:52,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-10 08:09:24] 2025-10-10 12:08:52,432 | INFO     | sufficient remaining disk space (168994799616 B)
[2025-10-10 08:09:24] 2025-10-10 12:08:52,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 08:09:24] 2025-10-10 12:08:52,433 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 08:09:24] 2025-10-10 12:08:52,433 | INFO     | update_server=False
[2025-10-10 08:09:24] 2025-10-10 12:08:52,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 08:09:24] 2025-10-10 12:08:52,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 08:09:24] 2025-10-10 12:08:52,839 | INFO     | all job control threads have been joined
[2025-10-10 08:09:24] 2025-10-10 12:08:52,860 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 08:09:24] 2025-10-10 12:08:52,860 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 08:09:24] 2025-10-10 12:08:52,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:09:24] 2025-10-10 12:08:52,860 | INFO     | will abort loop
[2025-10-10 08:09:24] 2025-10-10 12:08:52,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:09:24] 2025-10-10 12:08:53,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 08:09:24] 2025-10-10 12:08:53,439 | INFO     | [job] retrieve thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:53,544 | INFO     | all payload control threads have been joined
[2025-10-10 08:09:24] 2025-10-10 12:08:53,544 | INFO     | all data control threads have been joined
[2025-10-10 08:09:24] 2025-10-10 12:08:53,723 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:53,845 | INFO     | [job] control thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:53,865 | INFO     | [job] job monitor thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:53,895 | INFO     | [job] queue monitor thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:53,968 | INFO     | [payload] failed_post thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:53,979 | INFO     | [payload] validate_post thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:54,107 | INFO     | [job] validate thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:54,420 | INFO     | [data] copytool_in thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:54,512 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:54,550 | INFO     | [payload] control thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:54,550 | INFO     | [data] control thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:54,935 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:55,045 | INFO     | [data] copytool_out thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:08:56,856 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:09:02,913 | INFO     | job.realtimelogging is not enabled
[2025-10-10 08:09:24] 2025-10-10 12:09:03,919 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 08:09:24] 2025-10-10 12:09:14,569 | INFO     | [monitor] cgroup control has ended
[2025-10-10 08:09:24] 2025-10-10 12:09:15,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396998104896)>', '<ExcThread(monitor, started 140395837126400)>']
[2025-10-10 08:09:24] 2025-10-10 12:09:20,669 | INFO     | all workflow threads have been joined
[2025-10-10 08:09:24] 2025-10-10 12:09:20,669 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 08:09:24] 2025-10-10 12:09:20,670 | INFO     | traces error code: 0
[2025-10-10 08:09:24] 2025-10-10 12:09:20,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 08:09:24] 2025-10-10 12:09:21,445 | INFO     | PID=1517396 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 08:09:24] 2025-10-10 12:09:21,446 | INFO     | .. there are 78 such processes running
[2025-10-10 08:09:24] 2025-10-10 12:09:21,446 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 08:09:24] 2025-10-10 12:09:21,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 08:09:24] 2025-10-10 12:09:21,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 08:09:24] 2025-10-10 12:09:21,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 08:09:24] 2025-10-10 12:09:21,447 | CRITICAL | thread 'MainThread' is not alive
[2025-10-10 08:09:24] 2025-10-10 12:09:21,447 | INFO     | [monitor] control thread has ended
[2025-10-10 08:09:24] 2025-10-10 12:09:22,043 [wrapper] ==== pilot stdout END ====
[2025-10-10 08:09:24] 2025-10-10 12:09:22,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 08:09:24] 2025-10-10 12:09:22,129 [wrapper] pilotpid: 1517396
[2025-10-10 08:09:24] 2025-10-10 12:09:22,185 [wrapper] Pilot exit status: 0
[2025-10-10 08:09:24] 2025-10-10 12:09:22,368 [wrapper] pandaids: 6837364065
[2025-10-10 08:09:24] 2025-10-10 12:09:23,548 [wrapper] cleanup supervisor_pilot 2696946 1517397
[2025-10-10 08:09:24] 2025-10-10 12:09:23,618 [wrapper] Test setup, not cleaning
[2025-10-10 08:09:24] 2025-10-10 12:09:23,691 [wrapper] apfmon messages muted
[2025-10-10 08:09:24] 2025-10-10 12:09:23,788 [wrapper] ==== wrapper stdout END ====
[2025-10-10 08:09:24] 2025-10-10 12:09:23,918 [wrapper] ==== wrapper stderr END ====
[2025-10-10 08:09:24]  *** Error codes and diagnostics ***
[2025-10-10 08:09:24]     "exeErrorCode": 0,
[2025-10-10 08:09:24]     "exeErrorDiag": "",
[2025-10-10 08:09:24]     "pilotErrorCode": 0,
[2025-10-10 08:09:24]     "pilotErrorDiag": "",
[2025-10-10 08:09:24]  *** Listing of results directory ***
[2025-10-10 08:09:24] total 413084
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 17:11 pilot3.tar.gz
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 17:28 queuedata.json
[2025-10-10 08:09:24] -rwx------. 1 boincer umatlas     36292 Oct  9 17:28 runpilot2-wrapper.sh
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 08:09:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:03 run_atlas
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:03 job.xml
[2025-10-10 08:09:24] -rw-r--r--. 2 boincer umatlas 218173236 Oct 10 06:03 EVNT.46676267._001118.pool.root.1
[2025-10-10 08:09:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:03 start_atlas.sh
[2025-10-10 08:09:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:03 shared
[2025-10-10 08:09:24] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 06:03 input.tar.gz
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:03 boinc_lockfile
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 06:03 pandaJob.out
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas    975511 Oct 10 06:04 agis_schedconf.cvmfs.json
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas   1560580 Oct 10 06:04 agis_ddmendpoints.agis.ALL.json
[2025-10-10 08:09:24] drwx------. 5 boincer umatlas      4096 Oct 10 06:05 pilot3
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas 198349240 Oct 10 08:07 HITS.46676269._026573.pool.root.1
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas       529 Oct 10 08:07 boinc_task_state.xml
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas      1035 Oct 10 08:07 memory_monitor_summary.json
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas    391187 Oct 10 08:08 log.46676269._026573.job.log.tgz.1
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas      7781 Oct 10 08:08 heartbeat.json
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 08:09 init_data.xml
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas        95 Oct 10 08:09 pilot_heartbeat.json
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas       893 Oct 10 08:09 pilotlog.txt
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas        27 Oct 10 08:09 wrapper_checkpoint.txt
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas    896278 Oct 10 08:09 log.46676269._026573.job.log.1
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas       357 Oct 10 08:09 output.list
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas       620 Oct 10 08:09 runtime_log
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas   1310720 Oct 10 08:09 result.tar.gz
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 08:09 boinc_mmap_file
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas      8695 Oct 10 08:09 runtime_log.err
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas       651 Oct 10 08:09 B8mNDm4MDR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmblOMDmxfinKo.diag
[2025-10-10 08:09:24] -rw-r--r--. 1 boincer umatlas     21184 Oct 10 08:09 stderr.txt
[2025-10-10 08:09:24] HITS file was successfully produced:
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas 198349240 Oct 10 08:07 shared/HITS.pool.root.1
[2025-10-10 08:09:24]  *** Contents of shared directory: ***
[2025-10-10 08:09:24] total 408624
[2025-10-10 08:09:24] -rw-r--r--. 2 boincer umatlas 218173236 Oct 10 06:03 ATLAS.root_0
[2025-10-10 08:09:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:03 start_atlas.sh
[2025-10-10 08:09:24] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 06:03 input.tar.gz
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas 198349240 Oct 10 08:07 HITS.pool.root.1
[2025-10-10 08:09:24] -rw-------. 1 boincer umatlas   1310720 Oct 10 08:09 result.tar.gz
08:09:46 (1500870): run_atlas exited; CPU time 24146.735355
08:09:46 (1500870): called boinc_finish(0)

</stderr_txt>
]]>

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