Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:28:31 (613702): wrapper (7.7.26015): starting
06:28:31 (613702): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 06:28:31] Arguments: --nthreads 9
[2025-10-10 06:28:31] Threads: 9
[2025-10-10 06:28:31] Checking for CVMFS
[2025-10-10 06:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:28:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:28:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:28:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:28:32] 2.13.2.0 4298 21350 221284 151543 1 65 21008014 32935936 4768 16776704 0 60504868 99.683 51479149 29859 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 06:28:32] CVMFS is ok
[2025-10-10 06:28:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:28:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:28:32] Further information can be found at the LHC@home message board.
[2025-10-10 06:28:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:28:32] Checking for apptainer binary...
[2025-10-10 06:28:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:28:32] Running /usr/bin/apptainer --version
[2025-10-10 06:28:32] apptainer version 1.4.3-1.el9
[2025-10-10 06:28:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:28:32] c-8-24.aglt2.org
[2025-10-10 06:28:32] apptainer works
[2025-10-10 06:28:32] Set ATHENA_PROC_NUMBER=9
[2025-10-10 06:28:32] Set ATHENA_CORE_NUMBER=9
[2025-10-10 06:28:32] Starting ATLAS job with PandaID=6837378026
[2025-10-10 06:28:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:59:13]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:59:13] 2025-10-10 11:58:34,429 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837378026/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:59:13] 2025-10-10 11:58:34,430 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-10 07:59:13] 2025-10-10 11:58:34,430 | WARNING  | maxPSS not found in memory monitor output
[2025-10-10 07:59:13] 2025-10-10 11:58:34,431 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3842564 B
[2025-10-10 07:59:13] 2025-10-10 11:58:34,432 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15303 B
[2025-10-10 07:59:13] 2025-10-10 11:58:34,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 07:59:13] 2025-10-10 11:58:34,445 | INFO     | sufficient remaining disk space (74542219264 B)
[2025-10-10 07:59:13] 2025-10-10 11:58:34,446 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-10 07:59:13] 2025-10-10 11:58:34,448 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6837378026: 4145535 B (within 2537553920 B limit)
[2025-10-10 07:59:13] 2025-10-10 11:58:34,449 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6837378026/HITS.46676269._029685.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-10 07:59:13] 2025-10-10 11:58:34,449 | INFO     | total size of present files: 0 B (workdir size: 4145535 B)
[2025-10-10 07:59:13] 2025-10-10 11:58:34,449 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6837378026/HITS.46676269._029685.pool.root.1 since it does not exist
[2025-10-10 07:59:13] 2025-10-10 11:58:34,879 | INFO     | PID=617370 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 07:59:13] 2025-10-10 11:58:34,880 | INFO     | .. there are 6 such processes running
[2025-10-10 07:59:13] 2025-10-10 11:58:34,936 | INFO     | number of running child processes to parent process 624426: 1
[2025-10-10 07:59:13] 2025-10-10 11:58:34,936 | INFO     | maximum number of monitored processes: 6
[2025-10-10 07:59:13] 2025-10-10 11:58:35,344 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 07:59:13] 2025-10-10 11:58:35,880 | INFO     | time since job start (5393s) is within the limit (172800.0s)
[2025-10-10 07:59:13] 2025-10-10 11:58:35,880 | INFO     | 5396s have passed since pilot start - server update state is 'RUNNING'
[2025-10-10 07:59:13] 2025-10-10 11:58:37,187 | INFO     | job 6837378026 has state=finished
[2025-10-10 07:59:13] 2025-10-10 11:58:37,187 | INFO     | preparing for final server update for job 6837378026 in state='finished'
[2025-10-10 07:59:13] 2025-10-10 11:58:37,188 | INFO     | this job has now completed (state=finished)
[2025-10-10 07:59:13] 2025-10-10 11:58:37,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 07:59:13] 2025-10-10 11:58:37,188 | INFO     | log transfer has been attempted: DONE
[2025-10-10 07:59:13] 2025-10-10 11:58:37,188 | INFO     | job 6837378026 has finished - writing final server update
[2025-10-10 07:59:13] 2025-10-10 11:58:37,188 | INFO     | total number of processed events: 400 (read)
[2025-10-10 07:59:13] 2025-10-10 11:58:37,189 | INFO     | executing command: lscpu
[2025-10-10 07:59:13] 2025-10-10 11:58:37,237 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 07:59:13] 2025-10-10 11:58:37,439 | INFO     | monitor loop #398: job 0:6837378026 is in state 'finished'
[2025-10-10 07:59:13] 2025-10-10 11:58:37,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:59:13] 2025-10-10 11:58:37,886 | INFO     | time since job start (5395s) is within the limit (172800.0s)
[2025-10-10 07:59:13] 2025-10-10 11:58:39,224 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-10 07:59:13] 2025-10-10 11:58:39,891 | INFO     | time since job start (5397s) is within the limit (172800.0s)
[2025-10-10 07:59:13] 2025-10-10 11:58:39,942 | INFO     | monitor loop #399: job 0:6837378026 is in state 'finished'
[2025-10-10 07:59:13] 2025-10-10 11:58:39,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:59:13] 2025-10-10 11:58:40,729 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 07:59:13] 2025-10-10 11:58:40,736 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2800.124724999999
[2025-10-10 07:59:13] 2025-10-10 11:58:40,742 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837378026/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:59:13] 2025-10-10 11:58:40,743 | INFO     | extracted standard info from prmon json
[2025-10-10 07:59:13] 2025-10-10 11:58:40,743 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:59:13] 2025-10-10 11:58:40,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:59:13] 2025-10-10 11:58:40,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:59:13] 2025-10-10 11:58:40,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:59:13] 2025-10-10 11:58:40,746 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:59:13] 2025-10-10 11:58:40,746 | INFO     | sum of square deviations: 164765880.0
[2025-10-10 07:59:13] 2025-10-10 11:58:40,747 | INFO     | sum of deviations: -6890026188.999997
[2025-10-10 07:59:13] 2025-10-10 11:58:40,747 | INFO     | mean x: 1760094890.0
[2025-10-10 07:59:13] 2025-10-10 11:58:40,747 | INFO     | mean y: 2315185.6790123456
[2025-10-10 07:59:13] 2025-10-10 11:58:40,747 | INFO     | -- intersect: 73604324820.35016
[2025-10-10 07:59:13] 2025-10-10 11:58:40,747 | INFO     | intersect: 73604324820.35016
[2025-10-10 07:59:13] 2025-10-10 11:58:40,748 | INFO     | chi2: 0.06550994934350479
[2025-10-10 07:59:13] 2025-10-10 11:58:40,748 | INFO     | -- intersect: 73604324820.35016
[2025-10-10 07:59:13] 2025-10-10 11:58:40,748 | INFO     | current memory leak: -41.82 B/s (using 81 data points, chi2=0.07)
[2025-10-10 07:59:13] 2025-10-10 11:58:40,748 | INFO     | could have reported an average CPU frequency of 2720 MHz (6 samples)
[2025-10-10 07:59:13] 2025-10-10 11:58:40,748 | INFO     | ..............................
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . Timing measurements:
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . get job = 0 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . initial setup = 2 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . payload setup = 4 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . stage-in = 0 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . payload execution = 5368 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . stage-out = 0 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | . log creation = 0 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,749 | INFO     | ..............................
[2025-10-10 07:59:13] 2025-10-10 11:58:40,856 | INFO     | 
[2025-10-10 07:59:13] 2025-10-10 11:58:40,856 | INFO     | job summary report
[2025-10-10 07:59:13] 2025-10-10 11:58:40,856 | INFO     | --------------------------------------------------
[2025-10-10 07:59:13] 2025-10-10 11:58:40,856 | INFO     | PanDA job id: 6837378026
[2025-10-10 07:59:13] 2025-10-10 11:58:40,856 | INFO     | task id: 46676269
[2025-10-10 07:59:13] 2025-10-10 11:58:40,856 | INFO     | errors: (none)
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | pilot state: finished 
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | transexitcode: 0
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | exeerrorcode: 0
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | exeerrordiag: 
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | exitcode: 0
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | exitmsg: OK
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | cpuconsumptiontime: 43673 s
[2025-10-10 07:59:13] 2025-10-10 11:58:40,857 | INFO     | nevents: 400
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | neventsw: 0
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | pid: 624426
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | pgrp: 624426
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | corecount: 9
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | event service: False
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 5375: 2375741, 5376: 2375740, 5377: 2384794, 5378: 2385006, 5384: 2385200}
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | --------------------------------------------------
[2025-10-10 07:59:13] 2025-10-10 11:58:40,858 | INFO     | 
[2025-10-10 07:59:13] 2025-10-10 11:58:40,859 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 07:59:13] 2025-10-10 11:58:40,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:59:13] 2025-10-10 11:58:40,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:59:13] 2025-10-10 11:58:40,879 | INFO     | job 6837378026 has completed (purged errors)
[2025-10-10 07:59:13] 2025-10-10 11:58:40,879 | INFO     | overall cleanup function is called
[2025-10-10 07:59:13] 2025-10-10 11:58:41,887 | INFO     | --- collectZombieJob: --- 10, [624426]
[2025-10-10 07:59:13] 2025-10-10 11:58:41,888 | INFO     | zombie collector waiting for pid 624426
[2025-10-10 07:59:13] 2025-10-10 11:58:41,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:59:13] 2025-10-10 11:58:41,888 | INFO     | collected zombie processes
[2025-10-10 07:59:13] 2025-10-10 11:58:41,888 | INFO     | will attempt to kill all subprocesses of pid=624426
[2025-10-10 07:59:13] 2025-10-10 11:58:42,141 | INFO     | process IDs to be killed: [624426] (in reverse order)
[2025-10-10 07:59:13] 2025-10-10 11:58:42,212 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:59:13] 2025-10-10 11:58:42,212 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:59:13] 2025-10-10 11:58:42,220 | INFO     | did not find any defunct processes belonging to 624426
[2025-10-10 07:59:13] 2025-10-10 11:58:42,227 | INFO     | did not find any defunct processes belonging to 624426
[2025-10-10 07:59:13] 2025-10-10 11:58:42,227 | INFO     | ready for new job
[2025-10-10 07:59:13] 2025-10-10 11:58:42,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:59:13] 2025-10-10 11:58:42,229 | INFO     | ***************************************
[2025-10-10 07:59:13] 2025-10-10 11:58:42,229 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:59:13] 2025-10-10 11:58:42,229 | INFO     | ***************************************
[2025-10-10 07:59:13] 2025-10-10 11:58:42,230 | INFO     | 
[2025-10-10 07:59:13] 2025-10-10 11:58:42,243 | INFO     | architecture information:
[2025-10-10 07:59:13] 2025-10-10 11:58:42,244 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:59:13] 2025-10-10 11:58:42,256 | INFO     | cat /etc/os-release:
[2025-10-10 07:59:13] NAME="CentOS Linux"
[2025-10-10 07:59:13] VERSION="7 (Core)"
[2025-10-10 07:59:13] ID="centos"
[2025-10-10 07:59:13] ID_LIKE="rhel fedora"
[2025-10-10 07:59:13] VERSION_ID="7"
[2025-10-10 07:59:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:59:13] ANSI_COLOR="0;31"
[2025-10-10 07:59:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:59:13] HOME_URL="https://www.centos.org/"
[2025-10-10 07:59:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:59:13] 
[2025-10-10 07:59:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:59:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:59:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:59:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:59:13] 
[2025-10-10 07:59:13] 2025-10-10 11:58:42,256 | INFO     | ***************************************
[2025-10-10 07:59:13] 2025-10-10 11:58:42,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 07:59:13] 2025-10-10 11:58:42,774 | INFO     | sufficient remaining disk space (74546413568 B)
[2025-10-10 07:59:13] 2025-10-10 11:58:42,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:59:13] 2025-10-10 11:58:42,775 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:59:13] 2025-10-10 11:58:42,775 | INFO     | update_server=False
[2025-10-10 07:59:13] 2025-10-10 11:58:42,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:59:13] 2025-10-10 11:58:42,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:59:13] 2025-10-10 11:58:42,776 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:59:13] 2025-10-10 11:58:42,874 | INFO     | all data control threads have been joined
[2025-10-10 07:59:13] 2025-10-10 11:58:43,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:59:13] 2025-10-10 11:58:43,450 | INFO     | aborting loop
[2025-10-10 07:59:13] 2025-10-10 11:58:43,454 | INFO     | all job control threads have been joined
[2025-10-10 07:59:13] 2025-10-10 11:58:43,777 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:43,780 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:43,798 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:43,843 | INFO     | all payload control threads have been joined
[2025-10-10 07:59:13] 2025-10-10 11:58:43,880 | INFO     | [data] control thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,020 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,152 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,395 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,456 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,459 | INFO     | [job] control thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,473 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,782 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,784 | INFO     | [job] validate thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:44,849 | INFO     | [payload] control thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:45,160 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:45,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:59:13] 2025-10-10 11:58:49,972 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:50,892 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:59:13] 2025-10-10 11:58:52,891 | INFO     | job.realtimelogging is not enabled
[2025-10-10 07:59:13] 2025-10-10 11:58:53,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:59:13] 2025-10-10 11:58:54,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763839838016)>', '<ExcThread(monitor, started 139763134756608)>']
[2025-10-10 07:59:13] 2025-10-10 11:58:59,096 | INFO     | all workflow threads have been joined
[2025-10-10 07:59:13] 2025-10-10 11:58:59,097 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:59:13] 2025-10-10 11:58:59,097 | INFO     | traces error code: 0
[2025-10-10 07:59:13] 2025-10-10 11:58:59,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:59:13] 2025-10-10 11:59:13,307 | INFO     | PID=617370 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:59:13] 2025-10-10 11:59:13,307 | INFO     | .. there are 6 such processes running
[2025-10-10 07:59:13] 2025-10-10 11:59:13,308 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:59:13] 2025-10-10 11:59:13,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:59:13] 2025-10-10 11:59:13,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:59:13] 2025-10-10 11:59:13,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:59:13] 2025-10-10 11:59:13,308 | INFO     | [monitor] control thread has ended
[2025-10-10 07:59:13] 2025-10-10 11:59:13,435 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:59:13] 2025-10-10 11:59:13,437 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:59:13] 2025-10-10 11:59:13,439 [wrapper] pilotpid: 617370
[2025-10-10 07:59:13] 2025-10-10 11:59:13,442 [wrapper] Pilot exit status: 0
[2025-10-10 07:59:13] 2025-10-10 11:59:13,451 [wrapper] pandaids: 6837378026
[2025-10-10 07:59:13] 2025-10-10 11:59:13,499 [wrapper] cleanup supervisor_pilot  821646 617371
[2025-10-10 07:59:13] 2025-10-10 11:59:13,501 [wrapper] Test setup, not cleaning
[2025-10-10 07:59:13] 2025-10-10 11:59:13,504 [wrapper] apfmon messages muted
[2025-10-10 07:59:13] 2025-10-10 11:59:13,506 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:59:13] 2025-10-10 11:59:13,508 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:59:13]  *** Error codes and diagnostics ***
[2025-10-10 07:59:13]     "exeErrorCode": 0,
[2025-10-10 07:59:13]     "exeErrorDiag": "",
[2025-10-10 07:59:13]     "pilotErrorCode": 0,
[2025-10-10 07:59:13]     "pilotErrorDiag": "",
[2025-10-10 07:59:13]  *** Listing of results directory ***
[2025-10-10 07:59:13] total 412392
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 21:20 pilot3.tar.gz
[2025-10-10 07:59:13] -rwx------. 1 boincer umatlas     36292 Oct  9 21:25 runpilot2-wrapper.sh
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 21:25 queuedata.json
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas       100 Oct 10 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:59:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 06:28 run_atlas
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas       105 Oct 10 06:28 job.xml
[2025-10-10 07:59:13] -rw-r--r--. 2 boincer umatlas 221747414 Oct 10 06:28 EVNT.46676267._001211.pool.root.1
[2025-10-10 07:59:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:28 start_atlas.sh
[2025-10-10 07:59:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 06:28 shared
[2025-10-10 07:59:13] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 06:28 input.tar.gz
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas         0 Oct 10 06:28 boinc_lockfile
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 06:28 pandaJob.out
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas    975528 Oct 10 06:28 agis_schedconf.cvmfs.json
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas   1560580 Oct 10 06:28 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:59:13] drwx------. 5 boincer umatlas      4096 Oct 10 06:28 pilot3
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas      6660 Oct 10 07:56 init_data.xml
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas 194342462 Oct 10 07:57 HITS.46676269._029685.pool.root.1
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas       529 Oct 10 07:57 boinc_task_state.xml
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas      1034 Oct 10 07:58 memory_monitor_summary.json
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas        95 Oct 10 07:58 pilot_heartbeat.json
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas    362743 Oct 10 07:58 log.46676269._029685.job.log.tgz.1
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas      7813 Oct 10 07:58 heartbeat.json
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 07:59 boinc_mmap_file
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas        27 Oct 10 07:59 wrapper_checkpoint.txt
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas       821 Oct 10 07:59 pilotlog.txt
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas    786707 Oct 10 07:59 log.46676269._029685.job.log.1
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas       357 Oct 10 07:59 output.list
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas       620 Oct 10 07:59 runtime_log
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas   1167360 Oct 10 07:59 result.tar.gz
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas       649 Oct 10 07:59 Y7GODmw3GR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpubNDmH1KwXm.diag
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas      8693 Oct 10 07:59 runtime_log.err
[2025-10-10 07:59:13] -rw-r--r--. 1 boincer umatlas     22423 Oct 10 07:59 stderr.txt
[2025-10-10 07:59:13] HITS file was successfully produced:
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas 194342462 Oct 10 07:57 shared/HITS.pool.root.1
[2025-10-10 07:59:13]  *** Contents of shared directory: ***
[2025-10-10 07:59:13] total 408064
[2025-10-10 07:59:13] -rw-r--r--. 2 boincer umatlas 221747414 Oct 10 06:28 ATLAS.root_0
[2025-10-10 07:59:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 06:28 start_atlas.sh
[2025-10-10 07:59:13] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 06:28 input.tar.gz
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas 194342462 Oct 10 07:57 HITS.pool.root.1
[2025-10-10 07:59:13] -rw-------. 1 boincer umatlas   1167360 Oct 10 07:59 result.tar.gz
07:59:14 (613702): run_atlas exited; CPU time 43800.899416
07:59:14 (613702): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN