Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 10:41:22 (9440): vboxwrapper version 26210
2025-10-12 10:41:22 (9440): BOINC client version: 8.2.4
2025-10-12 10:41:24 (9440): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-12 10:41:24 (9440): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 10:41:24 (9440): Create VM. (boinc_b735b4dd05b49390, slot#0)
2025-10-12 10:41:25 (9440): Setting Memory Size for VM. (4400MB)
2025-10-12 10:41:25 (9440): Setting CPU Count for VM. (4)
2025-10-12 10:41:25 (9440): Setting Chipset Options for VM.
2025-10-12 10:41:26 (9440): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 10:41:26 (9440): Setting Boot Options for VM.
2025-10-12 10:41:26 (9440): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 10:41:27 (9440): Enabling VM Network Access.
2025-10-12 10:41:27 (9440): Disabling USB Support for VM.
2025-10-12 10:41:27 (9440): Disabling COM Port Support for VM.
2025-10-12 10:41:28 (9440): Disabling LPT Port Support for VM.
2025-10-12 10:41:28 (9440): Disabling Audio Support for VM.
2025-10-12 10:41:28 (9440): Disabling Clipboard Support for VM.
2025-10-12 10:41:28 (9440): Disabling Drag and Drop Support for VM.
2025-10-12 10:41:29 (9440): Adding storage controller(s) to VM.
2025-10-12 10:41:29 (9440): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 10:41:30 (9440): Adding VirtualBox Guest Additions to VM.
2025-10-12 10:41:30 (9440): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 10:41:31 (9440): forwarding host port 61310 to guest port 80
2025-10-12 10:41:31 (9440): Enabling remote desktop for VM.
2025-10-12 10:41:31 (9440): Required extension pack not installed, remote desktop not enabled.
2025-10-12 10:41:31 (9440): Enabling shared directory for VM.
2025-10-12 10:41:32 (9440): Starting VM using VBoxManage interface. (boinc_b735b4dd05b49390, slot#0)
2025-10-12 10:41:38 (9440): Successfully started VM. (PID = '18488')
2025-10-12 10:41:38 (9440): Reporting VM Process ID to BOINC.
2025-10-12 10:41:38 (9440): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-12 10:41:38 (9440): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 10:41:38 (9440): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 10:41:38 (9440): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 10:41:38 (9440): Detected: Web Application Enabled (http://localhost:61310)
2025-10-12 10:41:38 (9440): Preference change detected
2025-10-12 10:41:38 (9440): Setting CPU throttle for VM. (100%)
2025-10-12 10:41:38 (9440): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 10:41:40 (9440): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 10:41:40 (9440): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 10:41:43 (9440): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 10:41:43 (9440): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 10:41:43 (9440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 10:41:51 (9440): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 10:41:51 (9440): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-12 10:42:01 (9440): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.000289 main     Log opened 2025-10-12T10:41:59.458961000Z
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.000538 main     OS Product: Linux
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.000585 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.000640 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.000714 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.000715 main     Process ID: 1306
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.000716 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 10:42:01 (9440): Guest Log: 00:00:00.003434 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 10:42:01 (9440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 10:42:01 (9440): Guest Log: [INFO] Mounting shared directory
2025-10-12 10:42:01 (9440): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 10:42:11 (9440): Guest Log: 00:00:10.008497 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 193 444 000ns (GuestNow=1 760 254 931 271 857 000 ns GuestLast=1 760 265 719 465 301 000 ns fSetTimeLastLoop=true )
2025-10-12 10:42:29 (9440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 10:42:29 (9440): Guest Log: [INFO] Detected branch: prod
2025-10-12 10:42:29 (9440): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 10:42:29 (9440): Guest Log: Copying input files
2025-10-12 10:42:32 (9440): Guest Log: Copied input files into RunAtlas.
2025-10-12 10:42:32 (9440): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 10:42:32 (9440): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 10:42:32 (9440): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 10:42:32 (9440): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 10:43:05 (9440): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 10:43:06 (9440): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 10:43:06 (9440): Guest Log: 2.6.3.0 1605 0 30176 151612 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 10:43:07 (9440): Guest Log: copied the webapp to /var/www
2025-10-12 10:43:07 (9440): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-12 10:43:07 (9440): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-12 10:43:07 (9440): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 10:43:08 (9440): Guest Log:  *** Starting ATLAS job. (PandaID=6837399528 taskID=46676269) ***
2025-10-12 12:26:04 (9440): Status Report: Elapsed Time: '6000.617298'
2025-10-12 12:26:04 (9440): Status Report: CPU Time: '21418.421875'
2025-10-12 14:09:54 (9440): Status Report: Elapsed Time: '12000.674362'
2025-10-12 14:09:54 (9440): Status Report: CPU Time: '44830.046875'
2025-10-12 15:00:14 (9440): Guest Log:  *** Job finished ***
2025-10-12 15:00:14 (9440): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 11:59:56,950 | INFO     | all workflow threads have been joined
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 11:59:56,950 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 11:59:56,950 | INFO     | traces error code: 0
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 11:59:56,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,553 | INFO     | PID=6007 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,555 | INFO     | found 0 job(s) in 20 queues
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,555 | INFO     | [monitor] control thread has ended
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,675 [wrapper] ==== pilot stdout END ====
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,683 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,691 [wrapper] pilotpid: 6007
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,699 [wrapper] Pilot exit status: 0
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,875 [wrapper] pandaids: 6837399528
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,944 [wrapper] cleanup supervisor_pilot 15591 6008
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,963 [wrapper] Test setup, not cleaning
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,970 [wrapper] apfmon messages muted
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,977 [wrapper] ==== wrapper stdout END ====
2025-10-12 15:00:14 (9440): Guest Log: 2025-10-12 12:00:13,985 [wrapper] ==== wrapper stderr END ====
2025-10-12 15:00:14 (9440): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 15:00:14 (9440): Guest Log:     "exeErrorCode": 0,
2025-10-12 15:00:14 (9440): Guest Log:     "exeErrorDiag": "",
2025-10-12 15:00:14 (9440): Guest Log:     "pilotErrorCode": 0,
2025-10-12 15:00:14 (9440): Guest Log:     "pilotErrorDiag": "",
2025-10-12 15:00:14 (9440): Guest Log:  *** Listing of results directory ***
2025-10-12 15:00:14 (9440): Guest Log: total 197444
2025-10-12 15:00:14 (9440): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 03:28 pilot3.tar.gz
2025-10-12 15:00:14 (9440): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 03:35 queuedata.json
2025-10-12 15:00:14 (9440): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 03:36 runpilot2-wrapper.sh
2025-10-12 15:00:14 (9440): Guest Log: -rwxr-xr-x. 1 atlas atlas     12094 Oct 12 07:42 init_data.xml
2025-10-12 15:00:14 (9440): Guest Log: -rwxr-xr-x. 1 atlas atlas    569681 Oct 12 07:42 input.tar.gz
2025-10-12 15:00:14 (9440): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 07:42 start_atlas.sh
2025-10-12 15:00:14 (9440): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 07:42 EVNT.46676267._001284.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 15:00:14 (9440): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 12 07:43 pandaJob.out
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas    975520 Oct 12 07:44 agis_schedconf.cvmfs.json
2025-10-12 15:00:14 (9440): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 07:44 pilot3
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas 193515405 Oct 12 11:58 HITS.46676269._031494.pool.root.1
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas      1035 Oct 12 11:59 memory_monitor_summary.json
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 11:59 agis_ddmendpoints.agis.ALL.json
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas    395034 Oct 12 11:59 log.46676269._031494.job.log.tgz.1
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas      7833 Oct 12 11:59 heartbeat.json
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 12:00 pilot_heartbeat.json
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas       744 Oct 12 12:00 pilotlog.txt
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas   2027372 Oct 12 12:00 log.46676269._031494.job.log.1
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 12:00 output.list
2025-10-12 15:00:14 (9440): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 12:00 runtime_log
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas   2437120 Oct 12 12:00 result.tar.gz
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas       662 Oct 12 12:00 TvaNDmx6IR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQCcNDmZYEcUo.diag
2025-10-12 15:00:14 (9440): Guest Log: -rw-r--r--. 1 atlas atlas      8652 Oct 12 12:00 runtime_log.err
2025-10-12 15:00:14 (9440): Guest Log: Looking for outputfile HITS.46676269._031494.pool.root.1
2025-10-12 15:00:14 (9440): Guest Log: HITS file was successfully produced
2025-10-12 15:00:14 (9440): Guest Log: -rw-------. 1 atlas atlas 193515405 Oct 12 11:58 /home/atlas/RunAtlas/HITS.46676269._031494.pool.root.1
2025-10-12 15:00:16 (9440): Guest Log: Successfully finished the ATLAS job!
2025-10-12 15:00:16 (9440): Guest Log: Copying the results back to the shared directory!
2025-10-12 15:00:16 (9440): Guest Log:  *** Contents of shared directory: ***
2025-10-12 15:00:17 (9440): Guest Log: total 411956
2025-10-12 15:00:17 (9440): Guest Log: -rwxrwxrwx. 1 root root 225285919 Oct 12 07:41 ATLAS.root_0
2025-10-12 15:00:17 (9440): Guest Log: -rwxrwxrwx. 1 root root 193515405 Oct 12 12:00 HITS.pool.root.1
2025-10-12 15:00:17 (9440): Guest Log: -rwxrwxrwx. 1 root root     12094 Oct 12 07:41 init_data.xml
2025-10-12 15:00:17 (9440): Guest Log: -rwxrwxrwx. 1 root root    569681 Oct 10 09:52 input.tar.gz
2025-10-12 15:00:17 (9440): Guest Log: -rwxrwxrwx. 1 root root   2437120 Oct 12 12:00 result.tar.gz
2025-10-12 15:00:17 (9440): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 09:52 start_atlas.sh
2025-10-12 15:00:17 (9440): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 15:00:17 (9440): VM Completion File Detected.
2025-10-12 15:00:17 (9440): Powering off VM.
2025-10-12 15:00:19 (9440): Successfully stopped VM.
2025-10-12 15:00:19 (9440): Deregistering VM. (boinc_b735b4dd05b49390, slot#0)
2025-10-12 15:00:19 (9440): Removing network bandwidth throttle group from VM.
2025-10-12 15:00:19 (9440): Removing VM from VirtualBox.
2025-10-12 15:00:24 (9440): called boinc_finish(0)

</stderr_txt>
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