Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:04:58 (11960): wrapper (7.7.26015): starting
06:04:58 (11960): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 06:04:58] Arguments: --nthreads 12
[2025-10-10 06:04:58] Threads: 12
[2025-10-10 06:04:58] Checking for CVMFS
[2025-10-10 06:04:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 06:04:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 06:04:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 06:04:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 06:04:59] 2.11.2.0 2916 219812 99024 151541 2 57 16293428 20275201 1 130560 1 105065324 99.984 13307755 12436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 06:04:59] CVMFS is ok
[2025-10-10 06:04:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 06:04:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 06:04:59] Further information can be found at the LHC@home message board.
[2025-10-10 06:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 06:04:59] Checking for apptainer binary...
[2025-10-10 06:04:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 06:04:59] Running /usr/bin/apptainer --version
[2025-10-10 06:04:59] apptainer version 1.3.2-1.el7
[2025-10-10 06:04:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 06:05:00] c-205-23.aglt2.org
[2025-10-10 06:05:00] apptainer works
[2025-10-10 06:05:00] Set ATHENA_PROC_NUMBER=12
[2025-10-10 06:05:00] Set ATHENA_CORE_NUMBER=12
[2025-10-10 06:05:00] Starting ATLAS job with PandaID=6837376991
[2025-10-10 06:05:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:17:39]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:17:39]  status_code=0
[2025-10-10 07:17:39]  storage_token=
[2025-10-10 07:17:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837376991/log.46676269._028753.job.log.tgz.1
[2025-10-10 07:17:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/0e/log.46676269._028753.job.log.tgz.1
[2025-10-10 07:17:39]  workdir=None
[2025-10-10 07:17:39] ]
[2025-10-10 07:17:39] 2025-10-10 11:16:58,755 | INFO     | transferring file log.46676269._028753.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837376991/log.46676269._028753.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 07:17:39] 2025-10-10 11:16:58,755 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837376991/log.46676269._028753.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._028753.job
[2025-10-10 07:17:39] 2025-10-10 11:16:58,776 | INFO     | adding to output.list: log.46676269._028753.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/0e/log.46676269._028753.job.log.tg
[2025-10-10 07:17:39] 2025-10-10 11:16:58,777 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 07:17:39] 2025-10-10 11:16:58,777 | INFO     | summary of transferred files:
[2025-10-10 07:17:39] 2025-10-10 11:16:58,778 | INFO     |  -- lfn=log.46676269._028753.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 07:17:39] 2025-10-10 11:16:58,778 | INFO     | stage-out finished correctly
[2025-10-10 07:17:39] 2025-10-10 11:16:58,904 | INFO     | PID=16718 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 07:17:39] 2025-10-10 11:16:59,905 | INFO     | time since job start (4304s) is within the limit (172800.0s)
[2025-10-10 07:17:39] 2025-10-10 11:16:59,905 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 07:17:39] 2025-10-10 11:17:01,167 | INFO     | monitor loop #321: job 0:6837376991 is in state 'finished'
[2025-10-10 07:17:39] 2025-10-10 11:17:01,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:17:39] 2025-10-10 11:17:01,414 | INFO     | job 6837376991 has state=finished
[2025-10-10 07:17:39] 2025-10-10 11:17:01,414 | INFO     | preparing for final server update for job 6837376991 in state='finished'
[2025-10-10 07:17:39] 2025-10-10 11:17:01,414 | INFO     | this job has now completed (state=finished)
[2025-10-10 07:17:39] 2025-10-10 11:17:01,415 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 07:17:39] 2025-10-10 11:17:01,415 | INFO     | log transfer has been attempted: DONE
[2025-10-10 07:17:39] 2025-10-10 11:17:01,415 | INFO     | job 6837376991 has finished - writing final server update
[2025-10-10 07:17:39] 2025-10-10 11:17:01,415 | INFO     | total number of processed events: 400 (read)
[2025-10-10 07:17:39] 2025-10-10 11:17:01,416 | INFO     | executing command: lscpu
[2025-10-10 07:17:39] 2025-10-10 11:17:01,443 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 07:17:39] 2025-10-10 11:17:01,911 | INFO     | time since job start (4306s) is within the limit (172800.0s)
[2025-10-10 07:17:39] 2025-10-10 11:17:03,670 | INFO     | monitor loop #322: job 0:6837376991 is in state 'finished'
[2025-10-10 07:17:39] 2025-10-10 11:17:03,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:17:39] 2025-10-10 11:17:03,916 | INFO     | time since job start (4308s) is within the limit (172800.0s)
[2025-10-10 07:17:39] 2025-10-10 11:17:05,921 | INFO     | time since job start (4310s) is within the limit (172800.0s)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,173 | INFO     | monitor loop #323: job 0:6837376991 is in state 'finished'
[2025-10-10 07:17:39] 2025-10-10 11:17:06,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,546 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 07:17:39] 2025-10-10 11:17:06,550 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-10 07:17:39] 2025-10-10 11:17:06,552 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837376991/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,553 | INFO     | extracted standard info from prmon json
[2025-10-10 07:17:39] 2025-10-10 11:17:06,553 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:17:39] 2025-10-10 11:17:06,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:17:39] 2025-10-10 11:17:06,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:17:39] 2025-10-10 11:17:06,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:17:39] 2025-10-10 11:17:06,556 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:17:39] 2025-10-10 11:17:06,556 | INFO     | sum of square deviations: 77515872.0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,556 | INFO     | sum of deviations: 569325932.0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,557 | INFO     | mean x: 1760092940.0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,557 | INFO     | mean y: 2678555.380952381
[2025-10-10 07:17:39] 2025-10-10 11:17:06,557 | INFO     | -- intersect: -12924564957.691055
[2025-10-10 07:17:39] 2025-10-10 11:17:06,557 | INFO     | intersect: -12924564957.691055
[2025-10-10 07:17:39] 2025-10-10 11:17:06,557 | INFO     | chi2: 0.0013777253235039736
[2025-10-10 07:17:39] 2025-10-10 11:17:06,558 | INFO     | -- intersect: -12924564957.691055
[2025-10-10 07:17:39] 2025-10-10 11:17:06,558 | INFO     | current memory leak: 7.34 B/s (using 63 data points, chi2=0.00)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,558 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,558 | INFO     | ..............................
[2025-10-10 07:17:39] 2025-10-10 11:17:06,558 | INFO     | . Timing measurements:
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | . get job = 0 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | . initial setup = 2 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | . payload setup = 7 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | . stage-in = 0 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | . payload execution = 4275 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | . stage-out = 0 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | . log creation = 0 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,559 | INFO     | ..............................
[2025-10-10 07:17:39] 2025-10-10 11:17:06,643 | INFO     | 
[2025-10-10 07:17:39] 2025-10-10 11:17:06,643 | INFO     | job summary report
[2025-10-10 07:17:39] 2025-10-10 11:17:06,643 | INFO     | --------------------------------------------------
[2025-10-10 07:17:39] 2025-10-10 11:17:06,643 | INFO     | PanDA job id: 6837376991
[2025-10-10 07:17:39] 2025-10-10 11:17:06,643 | INFO     | task id: 46676269
[2025-10-10 07:17:39] 2025-10-10 11:17:06,643 | INFO     | errors: (none)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | pilot state: finished 
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | transexitcode: 0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | exeerrorcode: 0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | exeerrordiag: 
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | exitcode: 0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | exitmsg: OK
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | cpuconsumptiontime: 44967 s
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | nevents: 400
[2025-10-10 07:17:39] 2025-10-10 11:17:06,644 | INFO     | neventsw: 0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | pid: 23115
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | pgrp: 23115
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | corecount: 12
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | event service: False
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | sizes: {0: 2348855, 5: 2349117, 11: 2349173, 4285: 2375193, 4287: 2384191, 4288: 2384247, 4295: 2384569}
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | --------------------------------------------------
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | 
[2025-10-10 07:17:39] 2025-10-10 11:17:06,645 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 07:17:39] 2025-10-10 11:17:06,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,670 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,670 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,670 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,672 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,672 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:17:39] 2025-10-10 11:17:06,673 | INFO     | job 6837376991 has completed (purged errors)
[2025-10-10 07:17:39] 2025-10-10 11:17:06,673 | INFO     | overall cleanup function is called
[2025-10-10 07:17:39] 2025-10-10 11:17:07,681 | INFO     | --- collectZombieJob: --- 10, [23115]
[2025-10-10 07:17:39] 2025-10-10 11:17:07,681 | INFO     | zombie collector waiting for pid 23115
[2025-10-10 07:17:39] 2025-10-10 11:17:07,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:17:39] 2025-10-10 11:17:07,681 | INFO     | collected zombie processes
[2025-10-10 07:17:39] 2025-10-10 11:17:07,682 | INFO     | will attempt to kill all subprocesses of pid=23115
[2025-10-10 07:17:39] 2025-10-10 11:17:07,772 | INFO     | process IDs to be killed: [23115] (in reverse order)
[2025-10-10 07:17:39] 2025-10-10 11:17:07,822 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:17:39] 2025-10-10 11:17:07,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:17:39] 2025-10-10 11:17:07,827 | INFO     | did not find any defunct processes belonging to 23115
[2025-10-10 07:17:39] 2025-10-10 11:17:07,830 | INFO     | did not find any defunct processes belonging to 23115
[2025-10-10 07:17:39] 2025-10-10 11:17:07,830 | INFO     | ready for new job
[2025-10-10 07:17:39] 2025-10-10 11:17:07,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:17:39] 2025-10-10 11:17:07,831 | INFO     | ***************************************
[2025-10-10 07:17:39] 2025-10-10 11:17:07,831 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:17:39] 2025-10-10 11:17:07,831 | INFO     | ***************************************
[2025-10-10 07:17:39] 2025-10-10 11:17:07,832 | INFO     | 
[2025-10-10 07:17:39] 2025-10-10 11:17:07,832 | INFO     | architecture information:
[2025-10-10 07:17:39] 2025-10-10 11:17:07,833 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:17:39] 2025-10-10 11:17:07,847 | INFO     | cat /etc/os-release:
[2025-10-10 07:17:39] NAME="CentOS Linux"
[2025-10-10 07:17:39] VERSION="7 (Core)"
[2025-10-10 07:17:39] ID="centos"
[2025-10-10 07:17:39] ID_LIKE="rhel fedora"
[2025-10-10 07:17:39] VERSION_ID="7"
[2025-10-10 07:17:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:17:39] ANSI_COLOR="0;31"
[2025-10-10 07:17:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:17:39] HOME_URL="https://www.centos.org/"
[2025-10-10 07:17:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:17:39] 
[2025-10-10 07:17:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:17:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:17:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:17:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:17:39] 
[2025-10-10 07:17:39] 2025-10-10 11:17:07,848 | INFO     | ***************************************
[2025-10-10 07:17:39] 2025-10-10 11:17:08,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 07:17:39] 2025-10-10 11:17:08,367 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-10-10 07:17:39] 2025-10-10 11:17:08,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:17:39] 2025-10-10 11:17:08,368 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:17:39] 2025-10-10 11:17:08,368 | INFO     | update_server=False
[2025-10-10 07:17:39] 2025-10-10 11:17:08,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:17:39] 2025-10-10 11:17:08,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:17:39] 2025-10-10 11:17:08,544 | INFO     | all data control threads have been joined
[2025-10-10 07:17:39] 2025-10-10 11:17:08,692 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 07:17:39] 2025-10-10 11:17:08,692 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 07:17:39] 2025-10-10 11:17:08,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:17:39] 2025-10-10 11:17:08,693 | INFO     | will abort loop
[2025-10-10 07:17:39] 2025-10-10 11:17:08,728 | INFO     | all job control threads have been joined
[2025-10-10 07:17:39] 2025-10-10 11:17:09,110 | INFO     | all payload control threads have been joined
[2025-10-10 07:17:39] 2025-10-10 11:17:09,374 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:09,374 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:09,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:17:39] 2025-10-10 11:17:09,386 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:09,476 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:09,550 | INFO     | [data] control thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:09,698 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:09,732 | INFO     | [job] control thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:09,788 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:10,016 | INFO     | [job] validate thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:10,098 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:10,116 | INFO     | [payload] control thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:10,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:17:39] 2025-10-10 11:17:10,512 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:10,528 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:11,383 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:14,502 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:19,129 | INFO     | job.realtimelogging is not enabled
[2025-10-10 07:17:39] 2025-10-10 11:17:20,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:17:39] 2025-10-10 11:17:21,586 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:17:39] 2025-10-10 11:17:23,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139927100430144)>', '<ExcThread(monitor, started 139926049900288)>']
[2025-10-10 07:17:39] 2025-10-10 11:17:28,688 | INFO     | all workflow threads have been joined
[2025-10-10 07:17:39] 2025-10-10 11:17:28,689 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:17:39] 2025-10-10 11:17:28,689 | INFO     | traces error code: 0
[2025-10-10 07:17:39] 2025-10-10 11:17:28,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:17:39] 2025-10-10 11:17:39,122 | INFO     | PID=16718 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 07:17:39] 2025-10-10 11:17:39,123 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:17:39] 2025-10-10 11:17:39,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:17:39] 2025-10-10 11:17:39,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:17:39] 2025-10-10 11:17:39,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:17:39] 2025-10-10 11:17:39,124 | INFO     | [monitor] control thread has ended
[2025-10-10 07:17:39] 2025-10-10 11:17:39,209 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:17:39] 2025-10-10 11:17:39,213 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:17:39] 2025-10-10 11:17:39,217 [wrapper] pilotpid: 16718
[2025-10-10 07:17:39] 2025-10-10 11:17:39,221 [wrapper] Pilot exit status: 0
[2025-10-10 07:17:39] 2025-10-10 11:17:39,236 [wrapper] pandaids: 6837376991
[2025-10-10 07:17:39] 2025-10-10 11:17:39,277 [wrapper] cleanup supervisor_pilot 28652 16719
[2025-10-10 07:17:39] 2025-10-10 11:17:39,281 [wrapper] Test setup, not cleaning
[2025-10-10 07:17:39] 2025-10-10 11:17:39,285 [wrapper] apfmon messages muted
[2025-10-10 07:17:39] 2025-10-10 11:17:39,289 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:17:39] 2025-10-10 11:17:39,293 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:17:39]  *** Error codes and diagnostics ***
[2025-10-10 07:17:39]     "exeErrorCode": 0,
[2025-10-10 07:17:39]     "exeErrorDiag": "",
[2025-10-10 07:17:39]     "pilotErrorCode": 0,
[2025-10-10 07:17:39]     "pilotErrorDiag": "",
[2025-10-10 07:17:39]  *** Listing of results directory ***
[2025-10-10 07:17:39] total 410348
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 20:12 pilot3.tar.gz
[2025-10-10 07:17:39] -rwx------ 1 boincer umatlas     36292 Oct  9 20:18 runpilot2-wrapper.sh
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 20:18 queuedata.json
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas       100 Oct 10 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:17:39] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 06:04 run_atlas
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas       105 Oct 10 06:04 job.xml
[2025-10-10 07:17:39] -rw-r--r-- 2 boincer umatlas 220516402 Oct 10 06:04 EVNT.46676267._001017.pool.root.1
[2025-10-10 07:17:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 06:04 start_atlas.sh
[2025-10-10 07:17:39] drwxrwx--x 2 boincer umatlas      4096 Oct 10 06:04 shared
[2025-10-10 07:17:39] -rw-r--r-- 2 boincer umatlas    569680 Oct 10 06:04 input.tar.gz
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas         0 Oct 10 06:04 boinc_lockfile
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas      2549 Oct 10 06:05 pandaJob.out
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas    975511 Oct 10 06:05 agis_schedconf.cvmfs.json
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas   1560580 Oct 10 06:05 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:17:39] drwx------ 5 boincer umatlas      4096 Oct 10 06:05 pilot3
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas      5952 Oct 10 07:10 init_data.xml
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas 193750116 Oct 10 07:16 HITS.46676269._028753.pool.root.1
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas       530 Oct 10 07:16 boinc_task_state.xml
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas      1049 Oct 10 07:16 memory_monitor_summary.json
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas    382080 Oct 10 07:16 log.46676269._028753.job.log.tgz.1
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas      7850 Oct 10 07:17 heartbeat.json
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 07:17 boinc_mmap_file
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas        27 Oct 10 07:17 wrapper_checkpoint.txt
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas        95 Oct 10 07:17 pilot_heartbeat.json
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas       745 Oct 10 07:17 pilotlog.txt
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas    628239 Oct 10 07:17 log.46676269._028753.job.log.1
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas       357 Oct 10 07:17 output.list
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas       620 Oct 10 07:17 runtime_log
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas   1034240 Oct 10 07:17 result.tar.gz
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas      8705 Oct 10 07:17 runtime_log.err
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas       659 Oct 10 07:17 DAzMDmc1FR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFkbNDmVc9XEo.diag
[2025-10-10 07:17:39] -rw-r--r-- 1 boincer umatlas     22145 Oct 10 07:17 stderr.txt
[2025-10-10 07:17:39] HITS file was successfully produced:
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas 193750116 Oct 10 07:16 shared/HITS.pool.root.1
[2025-10-10 07:17:39]  *** Contents of shared directory: ***
[2025-10-10 07:17:39] total 406156
[2025-10-10 07:17:39] -rw-r--r-- 2 boincer umatlas 220516402 Oct 10 06:04 ATLAS.root_0
[2025-10-10 07:17:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 06:04 start_atlas.sh
[2025-10-10 07:17:39] -rw-r--r-- 2 boincer umatlas    569680 Oct 10 06:04 input.tar.gz
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas 193750116 Oct 10 07:16 HITS.pool.root.1
[2025-10-10 07:17:39] -rw------- 1 boincer umatlas   1034240 Oct 10 07:17 result.tar.gz
07:17:40 (11960): run_atlas exited; CPU time 44935.812190
07:17:40 (11960): called boinc_finish(0)

</stderr_txt>
]]>

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