Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:56:48 (102017): wrapper (7.7.26015): starting
18:56:48 (102017): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 18:56:48] Arguments: --nthreads 4
[2025-10-10 18:56:48] Threads: 4
[2025-10-10 18:56:48] Checking for CVMFS
[2025-10-10 18:56:48] No cvmfs_config command found, will try listing directly
[2025-10-10 18:56:48] CVMFS is ok
[2025-10-10 18:56:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:56:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:56:48] Further information can be found at the LHC@home message board.
[2025-10-10 18:56:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:56:48] Checking for apptainer binary...
[2025-10-10 18:56:48] which: no apptainer in ((null))
[2025-10-10 18:56:48] apptainer is not installed, using version from CVMFS
[2025-10-10 18:56:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:56:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-10-10 18:56:48] apptainer works
[2025-10-10 18:56:48] Set ATHENA_PROC_NUMBER=4
[2025-10-10 18:56:48] Set ATHENA_CORE_NUMBER=4
[2025-10-10 18:56:48] Starting ATLAS job with PandaID=6837400260
[2025-10-10 18:56:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 22:10:01]  *** The last 200 lines of the pilot log: ***
[2025-10-10 22:10:01] 2025-10-10 20:04:46,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 22:10:01] 2025-10-10 20:04:46,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 22:10:01] 2025-10-10 20:04:46,791 | INFO     | fitting pss+swap vs Time
[2025-10-10 22:10:01] 2025-10-10 20:04:46,791 | INFO     | sum of square deviations: 1963274020.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,792 | INFO     | sum of deviations: -5371119662.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,792 | INFO     | mean x: 1760121057.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,792 | INFO     | mean y: 2331402.3135135137
[2025-10-10 22:10:01] 2025-10-10 20:04:46,793 | INFO     | -- intersect: 4817665747.110131
[2025-10-10 22:10:01] 2025-10-10 20:04:46,793 | INFO     | intersect: 4817665747.110131
[2025-10-10 22:10:01] 2025-10-10 20:04:46,793 | INFO     | chi2: 2.169892929994634
[2025-10-10 22:10:01] 2025-10-10 20:04:46,794 | INFO     | sum of square deviations: 1808350185.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,795 | INFO     | sum of deviations: 6228499062.000003
[2025-10-10 22:10:01] 2025-10-10 20:04:46,795 | INFO     | mean x: 1760120904.5
[2025-10-10 22:10:01] 2025-10-10 20:04:46,795 | INFO     | mean y: 2342572.355555556
[2025-10-10 22:10:01] 2025-10-10 20:04:46,795 | INFO     | -- intersect: -6060040418.295588
[2025-10-10 22:10:01] 2025-10-10 20:04:46,795 | INFO     | intersect: -6060040418.295588
[2025-10-10 22:10:01] 2025-10-10 20:04:46,796 | INFO     | chi2: 1.3893133752665279
[2025-10-10 22:10:01] 2025-10-10 20:04:46,796 | INFO     | current chi2=1.3893133752665279 (change=35.97318300539541 %)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,796 | INFO     | sum of square deviations: 1661798600.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,797 | INFO     | sum of deviations: 6129291102.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,797 | INFO     | mean x: 1760120752.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,797 | INFO     | mean y: 2342469.1085714283
[2025-10-10 22:10:01] 2025-10-10 20:04:46,798 | INFO     | -- intersect: -6489594919.501064
[2025-10-10 22:10:01] 2025-10-10 20:04:46,798 | INFO     | intersect: -6489594919.501064
[2025-10-10 22:10:01] 2025-10-10 20:04:46,798 | INFO     | chi2: 1.3901002065095875
[2025-10-10 22:10:01] 2025-10-10 20:04:46,798 | INFO     | current chi2=1.3901002065095875 (change=-0.056634540274883946 %)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,798 | INFO     | right removable region: 174
[2025-10-10 22:10:01] 2025-10-10 20:04:46,799 | INFO     | sum of square deviations: 1808350185.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,800 | INFO     | sum of deviations: -25310300255.000004
[2025-10-10 22:10:01] 2025-10-10 20:04:46,800 | INFO     | mean x: 1760121209.5
[2025-10-10 22:10:01] 2025-10-10 20:04:46,800 | INFO     | mean y: 2350682.4777777777
[2025-10-10 22:10:01] 2025-10-10 20:04:46,800 | INFO     | -- intersect: 24637621365.760155
[2025-10-10 22:10:01] 2025-10-10 20:04:46,800 | INFO     | intersect: 24637621365.760155
[2025-10-10 22:10:01] 2025-10-10 20:04:46,801 | INFO     | chi2: 0.9341486070469243
[2025-10-10 22:10:01] 2025-10-10 20:04:46,801 | INFO     | current chi2=0.9341486070469243 (change=56.94955294180186 %)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,801 | INFO     | sum of square deviations: 1661798600.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,802 | INFO     | sum of deviations: -18484579351.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,803 | INFO     | mean x: 1760121362.0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,803 | INFO     | mean y: 2343572.1142857145
[2025-10-10 22:10:01] 2025-10-10 20:04:46,803 | INFO     | -- intersect: 19580590288.220074
[2025-10-10 22:10:01] 2025-10-10 20:04:46,803 | INFO     | intersect: 19580590288.220074
[2025-10-10 22:10:01] 2025-10-10 20:04:46,803 | INFO     | chi2: 0.8992332824811599
[2025-10-10 22:10:01] 2025-10-10 20:04:46,803 | INFO     | current chi2=0.8992332824811599 (change=3.737662755408951 %)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,804 | INFO     | left removable region: 20
[2025-10-10 22:10:01] 2025-10-10 20:04:46,804 | INFO     | sum of square deviations: 1132458442.5
[2025-10-10 22:10:01] 2025-10-10 20:04:46,805 | INFO     | sum of deviations: 2466694698.0000005
[2025-10-10 22:10:01] 2025-10-10 20:04:46,805 | INFO     | mean x: 1760121331.5
[2025-10-10 22:10:01] 2025-10-10 20:04:46,805 | INFO     | mean y: 2344280.103896104
[2025-10-10 22:10:01] 2025-10-10 20:04:46,805 | INFO     | -- intersect: -3831511156.271423
[2025-10-10 22:10:01] 2025-10-10 20:04:46,805 | INFO     | intersect: -3831511156.271423
[2025-10-10 22:10:01] 2025-10-10 20:04:46,806 | INFO     | chi2: 0.0008595790846222672
[2025-10-10 22:10:01] 2025-10-10 20:04:46,806 | INFO     | -- intersect: -3831511156.271423
[2025-10-10 22:10:01] 2025-10-10 20:04:46,806 | INFO     | current memory leak: 2.18 B/s (using 154 data points, chi2=0.00)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,806 | INFO     | could have reported an average CPU frequency of 2614 MHz (10 samples)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | ..............................
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . Timing measurements:
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . get job = 0 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . initial setup = 1 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . payload setup = 5 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . stage-in = 0 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . payload execution = 11234 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . stage-out = 1 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,807 | INFO     | . log creation = 0 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,808 | INFO     | ..............................
[2025-10-10 22:10:01] 2025-10-10 20:04:46,916 | INFO     | 
[2025-10-10 22:10:01] 2025-10-10 20:04:46,917 | INFO     | job summary report
[2025-10-10 22:10:01] 2025-10-10 20:04:46,917 | INFO     | --------------------------------------------------
[2025-10-10 22:10:01] 2025-10-10 20:04:46,917 | INFO     | PanDA job id: 6837400260
[2025-10-10 22:10:01] 2025-10-10 20:04:46,917 | INFO     | task id: 46676269
[2025-10-10 22:10:01] 2025-10-10 20:04:46,917 | INFO     | errors: (none)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,917 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | pilot state: finished 
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | transexitcode: 0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | exeerrorcode: 0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | exeerrordiag: 
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | exitcode: 0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | exitmsg: OK
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | cpuconsumptiontime: 43449 s
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | nevents: 400
[2025-10-10 22:10:01] 2025-10-10 20:04:46,918 | INFO     | neventsw: 0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | pid: 112765
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | pgrp: 112765
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | corecount: 4
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | event service: False
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | sizes: {0: 2348697, 1: 2348896, 5: 2349158, 12: 2349214, 11243: 2378550, 11244: 2378549, 11245: 2387809, 11252: 2387947}
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | --------------------------------------------------
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | 
[2025-10-10 22:10:01] 2025-10-10 20:04:46,919 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-10-10 22:10:01] 2025-10-10 20:04:46,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,938 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,938 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,938 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,940 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,940 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 22:10:01] 2025-10-10 20:04:46,940 | INFO     | job 6837400260 has completed (purged errors)
[2025-10-10 22:10:01] 2025-10-10 20:04:46,941 | INFO     | overall cleanup function is called
[2025-10-10 22:10:01] 2025-10-10 20:04:47,948 | INFO     | --- collectZombieJob: --- 10, [112765]
[2025-10-10 22:10:01] 2025-10-10 20:04:47,948 | INFO     | zombie collector waiting for pid 112765
[2025-10-10 22:10:01] 2025-10-10 20:04:47,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 22:10:01] 2025-10-10 20:04:47,948 | INFO     | collected zombie processes
[2025-10-10 22:10:01] 2025-10-10 20:04:47,949 | INFO     | will attempt to kill all subprocesses of pid=112765
[2025-10-10 22:10:01] 2025-10-10 20:04:48,259 | INFO     | process IDs to be killed: [112765] (in reverse order)
[2025-10-10 22:10:01] 2025-10-10 20:04:48,340 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 22:10:01] 2025-10-10 20:04:48,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 22:10:01] 2025-10-10 20:04:48,348 | INFO     | did not find any defunct processes belonging to 112765
[2025-10-10 22:10:01] 2025-10-10 20:04:48,356 | INFO     | did not find any defunct processes belonging to 112765
[2025-10-10 22:10:01] 2025-10-10 20:04:48,356 | INFO     | ready for new job
[2025-10-10 22:10:01] 2025-10-10 20:04:48,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 22:10:01] 2025-10-10 20:04:48,358 | INFO     | ***************************************
[2025-10-10 22:10:01] 2025-10-10 20:04:48,358 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 22:10:01] 2025-10-10 20:04:48,358 | INFO     | ***************************************
[2025-10-10 22:10:01] 2025-10-10 20:04:48,359 | INFO     | 
[2025-10-10 22:10:01] 2025-10-10 20:04:48,361 | INFO     | architecture information:
[2025-10-10 22:10:01] 2025-10-10 20:04:48,361 | INFO     | executing command: cat /etc/os-release
[2025-10-10 22:10:01] 2025-10-10 20:04:48,375 | INFO     | cat /etc/os-release:
[2025-10-10 22:10:01] NAME="CentOS Linux"
[2025-10-10 22:10:01] VERSION="7 (Core)"
[2025-10-10 22:10:01] ID="centos"
[2025-10-10 22:10:01] ID_LIKE="rhel fedora"
[2025-10-10 22:10:01] VERSION_ID="7"
[2025-10-10 22:10:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 22:10:01] ANSI_COLOR="0;31"
[2025-10-10 22:10:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 22:10:01] HOME_URL="https://www.centos.org/"
[2025-10-10 22:10:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 22:10:01] 
[2025-10-10 22:10:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 22:10:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 22:10:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 22:10:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 22:10:01] 
[2025-10-10 22:10:01] 2025-10-10 20:04:48,375 | INFO     | ***************************************
[2025-10-10 22:10:01] 2025-10-10 20:04:48,877 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-10-10 22:10:01] 2025-10-10 20:04:48,891 | INFO     | sufficient remaining disk space (1677780320256 B)
[2025-10-10 22:10:01] 2025-10-10 20:04:48,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 22:10:01] 2025-10-10 20:04:48,891 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 22:10:01] 2025-10-10 20:04:48,891 | INFO     | update_server=False
[2025-10-10 22:10:01] 2025-10-10 20:04:48,892 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 22:10:01] 2025-10-10 20:04:48,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 22:10:01] 2025-10-10 20:04:48,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:10:01] 2025-10-10 20:04:49,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:10:01] 2025-10-10 20:04:49,127 | INFO     | aborting loop
[2025-10-10 22:10:01] 2025-10-10 20:04:49,527 | INFO     | all job control threads have been joined
[2025-10-10 22:10:01] 2025-10-10 20:04:49,661 | INFO     | all data control threads have been joined
[2025-10-10 22:10:01] 2025-10-10 20:04:49,896 | INFO     | [job] queue monitor thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:49,897 | INFO     | [job] retrieve thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,010 | INFO     | all payload control threads have been joined
[2025-10-10 22:10:01] 2025-10-10 20:04:50,133 | INFO     | [job] job monitor thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,273 | INFO     | [job] validate thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,319 | INFO     | [data] copytool_in thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,323 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,515 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,524 | INFO     | [payload] failed_post thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,530 | INFO     | [job] control thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,666 | INFO     | [data] control thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,850 | INFO     | [payload] validate_post thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,898 | INFO     | [data] copytool_out thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:50,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 22:10:01] 2025-10-10 20:04:50,951 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:51,015 | INFO     | [payload] control thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:54,916 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:04:59,448 | INFO     | job.realtimelogging is not enabled
[2025-10-10 22:10:01] 2025-10-10 20:05:00,453 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 22:10:01] 2025-10-10 20:05:16,655 | INFO     | [monitor] cgroup control has ended
[2025-10-10 22:10:01] 2025-10-10 20:05:17,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22861564094272)>', '<ExcThread(monitor, started 22861320247040)>']
[2025-10-10 22:10:01] 2025-10-10 20:05:19,065 | INFO     | PID=106004 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 22:10:01] 2025-10-10 20:05:19,065 | INFO     | .. there are 4 such processes running
[2025-10-10 22:10:01] 2025-10-10 20:05:19,066 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 22:10:01] 2025-10-10 20:05:19,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 22:10:01] 2025-10-10 20:05:19,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 22:10:01] 2025-10-10 20:05:19,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 22:10:01] 2025-10-10 20:05:19,067 | INFO     | [monitor] control thread has ended
[2025-10-10 22:10:01] 2025-10-10 20:05:22,518 | INFO     | all workflow threads have been joined
[2025-10-10 22:10:01] 2025-10-10 20:05:22,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 22:10:01] 2025-10-10 20:05:22,519 | INFO     | traces error code: 0
[2025-10-10 22:10:01] 2025-10-10 20:05:22,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 22:10:01] 2025-10-10 20:05:22,638 [wrapper] ==== pilot stdout END ====
[2025-10-10 22:10:01] 2025-10-10 20:05:22,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 22:10:01] 2025-10-10 20:05:22,643 [wrapper] pilotpid: 106004
[2025-10-10 22:10:01] 2025-10-10 20:05:22,646 [wrapper] Pilot exit status: 0
[2025-10-10 22:10:01] 2025-10-10 20:05:22,654 [wrapper] pandaids: 6837400260
[2025-10-10 22:10:01] 2025-10-10 20:05:22,704 [wrapper] cleanup supervisor_pilot  292834 106005
[2025-10-10 22:10:01] 2025-10-10 20:05:22,706 [wrapper] Test setup, not cleaning
[2025-10-10 22:10:01] 2025-10-10 20:05:22,708 [wrapper] apfmon messages muted
[2025-10-10 22:10:01] 2025-10-10 20:05:22,711 [wrapper] ==== wrapper stdout END ====
[2025-10-10 22:10:01] 2025-10-10 20:05:22,713 [wrapper] ==== wrapper stderr END ====
[2025-10-10 22:10:01]  *** Error codes and diagnostics ***
[2025-10-10 22:10:01]     "exeErrorCode": 0,
[2025-10-10 22:10:01]     "exeErrorDiag": "",
[2025-10-10 22:10:01]     "pilotErrorCode": 0,
[2025-10-10 22:10:01]     "pilotErrorDiag": "",
[2025-10-10 22:10:01]  *** Listing of results directory ***
[2025-10-10 22:10:01] total 416520
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc    557409 Oct 10 05:38 pilot3.tar.gz
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc      5112 Oct 10 05:54 queuedata.json
[2025-10-10 22:10:01] -rwx------ 1 boinc boinc     36292 Oct 10 05:55 runpilot2-wrapper.sh
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc       100 Oct 10 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 22:10:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 18:40 run_atlas
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc       105 Oct 10 18:40 job.xml
[2025-10-10 22:10:01] -rw-r--r-- 2 boinc boinc 221035819 Oct 10 18:56 EVNT.46676267._001294.pool.root.1
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc      6418 Oct 10 18:56 init_data.xml
[2025-10-10 22:10:01] drwxrwx--x 2 boinc boinc      4096 Oct 10 18:56 shared
[2025-10-10 22:10:01] -rw-r--r-- 2 boinc boinc    569685 Oct 10 18:56 input.tar.gz
[2025-10-10 22:10:01] -rw-r--r-- 2 boinc boinc     15120 Oct 10 18:56 start_atlas.sh
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc         0 Oct 10 18:56 boinc_lockfile
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc      2550 Oct 10 18:56 pandaJob.out
[2025-10-10 22:10:01] -rw------- 1 boinc boinc    975525 Oct 10 18:56 agis_schedconf.cvmfs.json
[2025-10-10 22:10:01] drwx------ 5 boinc boinc      4096 Oct 10 18:57 pilot3
[2025-10-10 22:10:01] -rw------- 1 boinc boinc 197618623 Oct 10 22:03 HITS.46676269._031755.pool.root.1
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc       528 Oct 10 22:04 boinc_task_state.xml
[2025-10-10 22:10:01] -rw------- 1 boinc boinc      1033 Oct 10 22:04 memory_monitor_summary.json
[2025-10-10 22:10:01] -rw------- 1 boinc boinc   1560580 Oct 10 22:04 agis_ddmendpoints.agis.ALL.json
[2025-10-10 22:10:01] -rw------- 1 boinc boinc    366275 Oct 10 22:04 log.46676269._031755.job.log.tgz.1
[2025-10-10 22:10:01] -rw------- 1 boinc boinc      7844 Oct 10 22:04 heartbeat.json
[2025-10-10 22:10:01] -rw------- 1 boinc boinc        95 Oct 10 22:05 pilot_heartbeat.json
[2025-10-10 22:10:01] -rw------- 1 boinc boinc      4905 Oct 10 22:05 pilotlog.txt
[2025-10-10 22:10:01] -rw------- 1 boinc boinc   1613704 Oct 10 22:05 log.46676269._031755.job.log.1
[2025-10-10 22:10:01] -rw------- 1 boinc boinc       357 Oct 10 22:05 output.list
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc       620 Oct 10 22:05 runtime_log
[2025-10-10 22:10:01] -rw------- 1 boinc boinc   1996800 Oct 10 22:05 result.tar.gz
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc      9070 Oct 10 22:05 runtime_log.err
[2025-10-10 22:10:01] -rw------- 1 boinc boinc       664 Oct 10 22:05 9EUMDmuOJR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgHPMDmZgWoXm.diag
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc      8192 Oct 10 22:10 boinc_mmap_file
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc        26 Oct 10 22:10 wrapper_checkpoint.txt
[2025-10-10 22:10:01] -rw-r--r-- 1 boinc boinc     20662 Oct 10 22:10 stderr.txt
[2025-10-10 22:10:01] HITS file was successfully produced:
[2025-10-10 22:10:01] -rw------- 1 boinc boinc 197618623 Oct 10 22:03 shared/HITS.pool.root.1
[2025-10-10 22:10:01]  *** Contents of shared directory: ***
[2025-10-10 22:10:01] total 411380
[2025-10-10 22:10:01] -rw-r--r-- 2 boinc boinc 221035819 Oct 10 18:56 ATLAS.root_0
[2025-10-10 22:10:01] -rw-r--r-- 2 boinc boinc    569685 Oct 10 18:56 input.tar.gz
[2025-10-10 22:10:01] -rw-r--r-- 2 boinc boinc     15120 Oct 10 18:56 start_atlas.sh
[2025-10-10 22:10:01] -rw------- 1 boinc boinc 197618623 Oct 10 22:03 HITS.pool.root.1
[2025-10-10 22:10:01] -rw------- 1 boinc boinc   1996800 Oct 10 22:05 result.tar.gz
22:10:03 (102017): run_atlas exited; CPU time 43871.277589
22:10:03 (102017): called boinc_finish(0)

</stderr_txt>
]]>

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