Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:23 (1656708): wrapper (7.7.26015): starting
05:01:23 (1656708): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 05:01:23] Arguments: --nthreads 8
[2025-10-10 05:01:23] Threads: 8
[2025-10-10 05:01:23] Checking for CVMFS
[2025-10-10 05:01:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 05:01:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 05:01:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 05:01:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 05:01:25] 2.13.2.0 1459556 693 129704 151539 3 886 32086444 40960000 28589 16776704 0 7439534 99.805 4061258 33623 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 05:01:25] CVMFS is ok
[2025-10-10 05:01:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 05:01:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 05:01:25] Further information can be found at the LHC@home message board.
[2025-10-10 05:01:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 05:01:25] Checking for apptainer binary...
[2025-10-10 05:01:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 05:01:25] Running /usr/bin/apptainer --version
[2025-10-10 05:01:25] apptainer version 1.4.3-1.el9
[2025-10-10 05:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 05:01:27] c8-16-1.aglt2.org
[2025-10-10 05:01:27] apptainer works
[2025-10-10 05:01:28] Set ATHENA_PROC_NUMBER=8
[2025-10-10 05:01:28] Set ATHENA_CORE_NUMBER=8
[2025-10-10 05:01:28] Starting ATLAS job with PandaID=6837376576
[2025-10-10 05:01:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 06:37:46]  *** The last 200 lines of the pilot log: ***
[2025-10-10 06:37:46] 2025-10-10 10:36:45,550 | INFO     | executing command: lscpu
[2025-10-10 06:37:46] 2025-10-10 10:36:45,746 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 06:37:46] 2025-10-10 10:36:46,484 | INFO     | time since job start (5660s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:36:47,979 | INFO     | monitor loop #375: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:36:47,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:36:48,490 | INFO     | time since job start (5662s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:36:50,494 | INFO     | monitor loop #376: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:36:50,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:36:50,498 | INFO     | time since job start (5664s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:36:52,505 | INFO     | time since job start (5666s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:36:52,999 | INFO     | monitor loop #377: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:36:53,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:36:55,042 | INFO     | PID=1684501 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 06:37:46] 2025-10-10 10:36:55,042 | INFO     | .. there are 35 such processes running
[2025-10-10 06:37:46] 2025-10-10 10:36:55,504 | INFO     | monitor loop #378: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:36:55,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:36:56,055 | INFO     | time since job start (5670s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:36:58,009 | INFO     | monitor loop #379: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:36:58,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:36:58,066 | INFO     | time since job start (5672s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:37:00,088 | INFO     | time since job start (5674s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:37:00,514 | INFO     | monitor loop #380: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:37:00,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:37:02,095 | INFO     | time since job start (5676s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:37:03,019 | INFO     | monitor loop #381: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:37:03,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:37:04,102 | INFO     | time since job start (5678s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:37:05,524 | INFO     | monitor loop #382: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:37:05,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:37:06,109 | INFO     | time since job start (5680s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:37:08,045 | INFO     | monitor loop #383: job 0:6837376576 is in state 'finished'
[2025-10-10 06:37:46] 2025-10-10 10:37:08,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 06:37:46] 2025-10-10 10:37:08,123 | INFO     | time since job start (5682s) is within the limit (172800.0s)
[2025-10-10 06:37:46] 2025-10-10 10:37:08,777 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 06:37:46] 2025-10-10 10:37:08,803 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3798.6559921875
[2025-10-10 06:37:46] 2025-10-10 10:37:08,819 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6837376576/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 06:37:46] 2025-10-10 10:37:08,820 | INFO     | extracted standard info from prmon json
[2025-10-10 06:37:46] 2025-10-10 10:37:08,820 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 06:37:46] 2025-10-10 10:37:08,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 06:37:46] 2025-10-10 10:37:08,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 06:37:46] 2025-10-10 10:37:08,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 06:37:46] 2025-10-10 10:37:08,822 | INFO     | fitting pss+swap vs Time
[2025-10-10 06:37:46] 2025-10-10 10:37:08,822 | INFO     | sum of square deviations: 183769762.809524
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | sum of deviations: 928568823.1666667
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | mean x: 1760089898.547619
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | mean y: 2422374.5833333335
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | -- intersect: -8891122356.471836
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | intersect: -8891122356.471836
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | chi2: 0.008269186704560411
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | -- intersect: -8891122356.471836
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | current memory leak: 5.05 B/s (using 84 data points, chi2=0.01)
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | could have reported an average CPU frequency of 3797 MHz (7 samples)
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | ..............................
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | . Timing measurements:
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | . get job = 0 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,823 | INFO     | . initial setup = 3 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,824 | INFO     | . payload setup = 30 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,824 | INFO     | . stage-in = 0 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,824 | INFO     | . payload execution = 5563 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,824 | INFO     | . stage-out = 1 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,824 | INFO     | . log creation = 0 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,824 | INFO     | ..............................
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | 
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | job summary report
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | --------------------------------------------------
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | PanDA job id: 6837376576
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | task id: 46676269
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | errors: (none)
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | pilot state: finished 
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | transexitcode: 0
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | exeerrorcode: 0
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | exeerrordiag: 
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | exitcode: 0
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | exitmsg: OK
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | cpuconsumptiontime: 23045 s
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | nevents: 400
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | neventsw: 0
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | pid: 1707085
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | pgrp: 1707085
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | corecount: 8
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | event service: False
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | sizes: {0: 2348855, 11: 2348855, 22: 2349173, 33: 2349173, 5598: 2375902, 5600: 2384900, 5602: 2385084, 5627: 2385278}
[2025-10-10 06:37:46] 2025-10-10 10:37:08,922 | INFO     | --------------------------------------------------
[2025-10-10 06:37:46] 2025-10-10 10:37:08,923 | INFO     | 
[2025-10-10 06:37:46] 2025-10-10 10:37:08,923 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-10 06:37:46] 2025-10-10 10:37:09,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 06:37:46] 2025-10-10 10:37:09,117 | INFO     | job 6837376576 has completed (purged errors)
[2025-10-10 06:37:46] 2025-10-10 10:37:09,118 | INFO     | overall cleanup function is called
[2025-10-10 06:37:46] 2025-10-10 10:37:10,126 | INFO     | --- collectZombieJob: --- 10, [1707085]
[2025-10-10 06:37:46] 2025-10-10 10:37:10,127 | INFO     | zombie collector waiting for pid 1707085
[2025-10-10 06:37:46] 2025-10-10 10:37:10,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 06:37:46] 2025-10-10 10:37:10,127 | INFO     | collected zombie processes
[2025-10-10 06:37:46] 2025-10-10 10:37:10,127 | INFO     | will attempt to kill all subprocesses of pid=1707085
[2025-10-10 06:37:46] 2025-10-10 10:37:11,401 | INFO     | process IDs to be killed: [1707085] (in reverse order)
[2025-10-10 06:37:46] 2025-10-10 10:37:11,636 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 06:37:46] 2025-10-10 10:37:11,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 06:37:46] 2025-10-10 10:37:11,683 | INFO     | did not find any defunct processes belonging to 1707085
[2025-10-10 06:37:46] 2025-10-10 10:37:11,836 | INFO     | did not find any defunct processes belonging to 1707085
[2025-10-10 06:37:46] 2025-10-10 10:37:11,894 | INFO     | ready for new job
[2025-10-10 06:37:46] 2025-10-10 10:37:11,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 06:37:46] 2025-10-10 10:37:11,926 | INFO     | ***************************************
[2025-10-10 06:37:46] 2025-10-10 10:37:11,927 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 06:37:46] 2025-10-10 10:37:11,927 | INFO     | ***************************************
[2025-10-10 06:37:46] 2025-10-10 10:37:11,927 | INFO     | 
[2025-10-10 06:37:46] 2025-10-10 10:37:11,976 | INFO     | architecture information:
[2025-10-10 06:37:46] 2025-10-10 10:37:11,985 | INFO     | executing command: cat /etc/os-release
[2025-10-10 06:37:46] 2025-10-10 10:37:12,029 | INFO     | cat /etc/os-release:
[2025-10-10 06:37:46] NAME="CentOS Linux"
[2025-10-10 06:37:46] VERSION="7 (Core)"
[2025-10-10 06:37:46] ID="centos"
[2025-10-10 06:37:46] ID_LIKE="rhel fedora"
[2025-10-10 06:37:46] VERSION_ID="7"
[2025-10-10 06:37:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 06:37:46] ANSI_COLOR="0;31"
[2025-10-10 06:37:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 06:37:46] HOME_URL="https://www.centos.org/"
[2025-10-10 06:37:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 06:37:46] 
[2025-10-10 06:37:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 06:37:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 06:37:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 06:37:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 06:37:46] 
[2025-10-10 06:37:46] 2025-10-10 10:37:12,029 | INFO     | ***************************************
[2025-10-10 06:37:46] 2025-10-10 10:37:12,534 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-10 06:37:46] 2025-10-10 10:37:12,578 | INFO     | sufficient remaining disk space (168319516672 B)
[2025-10-10 06:37:46] 2025-10-10 10:37:12,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 06:37:46] 2025-10-10 10:37:12,580 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 06:37:46] 2025-10-10 10:37:12,580 | INFO     | update_server=False
[2025-10-10 06:37:46] 2025-10-10 10:37:12,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 06:37:46] 2025-10-10 10:37:12,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 06:37:46] 2025-10-10 10:37:12,733 | INFO     | all job control threads have been joined
[2025-10-10 06:37:46] 2025-10-10 10:37:12,973 | INFO     | all payload control threads have been joined
[2025-10-10 06:37:46] 2025-10-10 10:37:12,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 06:37:46] 2025-10-10 10:37:13,072 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 06:37:46] 2025-10-10 10:37:13,073 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 06:37:46] 2025-10-10 10:37:13,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:37:46] 2025-10-10 10:37:13,073 | INFO     | will abort loop
[2025-10-10 06:37:46] 2025-10-10 10:37:13,476 | INFO     | all data control threads have been joined
[2025-10-10 06:37:46] 2025-10-10 10:37:13,586 | INFO     | [job] retrieve thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:13,751 | INFO     | [job] control thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:13,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:37:46] 2025-10-10 10:37:13,979 | INFO     | [payload] control thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,036 | INFO     | [job] validate thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,084 | INFO     | [job] job monitor thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,291 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,482 | INFO     | [data] control thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,510 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,525 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,596 | INFO     | [data] copytool_in thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:14,959 | INFO     | [job] queue monitor thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:15,016 | INFO     | [data] copytool_out thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:15,074 | INFO     | [payload] validate_post thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:15,075 | INFO     | [payload] failed_post thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:16,588 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:23,560 | INFO     | job.realtimelogging is not enabled
[2025-10-10 06:37:46] 2025-10-10 10:37:24,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 06:37:46] 2025-10-10 10:37:36,070 | INFO     | [monitor] cgroup control has ended
[2025-10-10 06:37:46] 2025-10-10 10:37:36,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682250172224)>', '<ExcThread(monitor, started 139681882674944)>']
[2025-10-10 06:37:46] 2025-10-10 10:37:41,670 | INFO     | all workflow threads have been joined
[2025-10-10 06:37:46] 2025-10-10 10:37:41,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 06:37:46] 2025-10-10 10:37:41,671 | INFO     | traces error code: 0
[2025-10-10 06:37:46] 2025-10-10 10:37:41,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 06:37:46] 2025-10-10 10:37:45,252 | INFO     | PID=1684501 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 06:37:46] 2025-10-10 10:37:45,252 | INFO     | .. there are 35 such processes running
[2025-10-10 06:37:46] 2025-10-10 10:37:45,252 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 06:37:46] 2025-10-10 10:37:45,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 06:37:46] 2025-10-10 10:37:45,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 06:37:46] 2025-10-10 10:37:45,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 06:37:46] 2025-10-10 10:37:45,253 | INFO     | [monitor] control thread has ended
[2025-10-10 06:37:46] 2025-10-10 10:37:45,385 [wrapper] ==== pilot stdout END ====
[2025-10-10 06:37:46] 2025-10-10 10:37:45,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 06:37:46] 2025-10-10 10:37:45,400 [wrapper] pilotpid: 1684501
[2025-10-10 06:37:46] 2025-10-10 10:37:45,404 [wrapper] Pilot exit status: 0
[2025-10-10 06:37:46] 2025-10-10 10:37:45,850 [wrapper] pandaids: 6837376576
[2025-10-10 06:37:46] 2025-10-10 10:37:46,125 [wrapper] cleanup supervisor_pilot 2104372 1684502
[2025-10-10 06:37:46] 2025-10-10 10:37:46,128 [wrapper] Test setup, not cleaning
[2025-10-10 06:37:46] 2025-10-10 10:37:46,131 [wrapper] apfmon messages muted
[2025-10-10 06:37:46] 2025-10-10 10:37:46,135 [wrapper] ==== wrapper stdout END ====
[2025-10-10 06:37:46] 2025-10-10 10:37:46,147 [wrapper] ==== wrapper stderr END ====
[2025-10-10 06:37:46]  *** Error codes and diagnostics ***
[2025-10-10 06:37:46]     "exeErrorCode": 0,
[2025-10-10 06:37:46]     "exeErrorDiag": "",
[2025-10-10 06:37:46]     "pilotErrorCode": 0,
[2025-10-10 06:37:46]     "pilotErrorDiag": "",
[2025-10-10 06:37:46]  *** Listing of results directory ***
[2025-10-10 06:37:47] total 413016
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 20:11 queuedata.json
[2025-10-10 06:37:47] -rwx------. 1 boincer umatlas     36292 Oct  9 20:12 runpilot2-wrapper.sh
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 20:12 pilot3.tar.gz
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas       100 Oct 10 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 06:37:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 05:01 run_atlas
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas       105 Oct 10 05:01 job.xml
[2025-10-10 06:37:47] -rw-r--r--. 2 boincer umatlas 220314340 Oct 10 05:01 EVNT.46676267._001010.pool.root.1
[2025-10-10 06:37:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 05:01 start_atlas.sh
[2025-10-10 06:37:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 05:01 shared
[2025-10-10 06:37:47] -rw-r--r--. 2 boincer umatlas    569675 Oct 10 05:01 input.tar.gz
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas         0 Oct 10 05:01 boinc_lockfile
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 05:01 pandaJob.out
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas    975462 Oct 10 05:02 agis_schedconf.cvmfs.json
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas   1560580 Oct 10 05:02 agis_ddmendpoints.agis.ALL.json
[2025-10-10 06:37:47] drwx------. 5 boincer umatlas      4096 Oct 10 05:02 pilot3
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas 196482989 Oct 10 06:36 HITS.46676269._028658.pool.root.1
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas       529 Oct 10 06:36 boinc_task_state.xml
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas      1055 Oct 10 06:36 memory_monitor_summary.json
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas    346171 Oct 10 06:36 log.46676269._028658.job.log.tgz.1
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 06:36 init_data.xml
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas      7795 Oct 10 06:37 heartbeat.json
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas        95 Oct 10 06:37 pilot_heartbeat.json
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas       823 Oct 10 06:37 pilotlog.txt
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 06:37 boinc_mmap_file
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas        27 Oct 10 06:37 wrapper_checkpoint.txt
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas    766610 Oct 10 06:37 log.46676269._028658.job.log.1
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas       357 Oct 10 06:37 output.list
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas       620 Oct 10 06:37 runtime_log
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas   1136640 Oct 10 06:37 result.tar.gz
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas      8698 Oct 10 06:37 runtime_log.err
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas       656 Oct 10 06:37 3tiLDm0uFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWjbNDm5x3fDm.diag
[2025-10-10 06:37:47] -rw-r--r--. 1 boincer umatlas     22327 Oct 10 06:37 stderr.txt
[2025-10-10 06:37:47] HITS file was successfully produced:
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas 196482989 Oct 10 06:36 shared/HITS.pool.root.1
[2025-10-10 06:37:47]  *** Contents of shared directory: ***
[2025-10-10 06:37:47] total 408724
[2025-10-10 06:37:47] -rw-r--r--. 2 boincer umatlas 220314340 Oct 10 05:01 ATLAS.root_0
[2025-10-10 06:37:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 05:01 start_atlas.sh
[2025-10-10 06:37:47] -rw-r--r--. 2 boincer umatlas    569675 Oct 10 05:01 input.tar.gz
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas 196482989 Oct 10 06:36 HITS.pool.root.1
[2025-10-10 06:37:47] -rw-------. 1 boincer umatlas   1136640 Oct 10 06:37 result.tar.gz
06:37:48 (1656708): run_atlas exited; CPU time 23178.195436
06:37:48 (1656708): called boinc_finish(0)

</stderr_txt>
]]>

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