Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 15:35:39 (4244): vboxwrapper version 26210
2025-10-10 15:35:39 (4244): BOINC client version: 8.2.4
2025-10-10 15:35:40 (4244): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2025-10-10 15:35:40 (4244): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 15:35:41 (4244): Create VM. (boinc_225818c1661037b5, slot#0)
2025-10-10 15:35:41 (4244): Setting Memory Size for VM. (4400MB)
2025-10-10 15:35:42 (4244): Setting CPU Count for VM. (4)
2025-10-10 15:35:42 (4244): Setting Chipset Options for VM.
2025-10-10 15:35:42 (4244): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 15:35:42 (4244): Setting Boot Options for VM.
2025-10-10 15:35:43 (4244): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 15:35:43 (4244): Enabling VM Network Access.
2025-10-10 15:35:43 (4244): Disabling USB Support for VM.
2025-10-10 15:35:44 (4244): Disabling COM Port Support for VM.
2025-10-10 15:35:44 (4244): Disabling LPT Port Support for VM.
2025-10-10 15:35:44 (4244): Disabling Audio Support for VM.
2025-10-10 15:35:44 (4244): Disabling Clipboard Support for VM.
2025-10-10 15:35:45 (4244): Disabling Drag and Drop Support for VM.
2025-10-10 15:35:45 (4244): Adding storage controller(s) to VM.
2025-10-10 15:35:45 (4244): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 15:35:47 (4244): Adding VirtualBox Guest Additions to VM.
2025-10-10 15:35:48 (4244): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 15:35:48 (4244): forwarding host port 60150 to guest port 80
2025-10-10 15:35:48 (4244): Enabling remote desktop for VM.
2025-10-10 15:35:49 (4244): Enabling shared directory for VM.
2025-10-10 15:35:49 (4244): Starting VM using VBoxManage interface. (boinc_225818c1661037b5, slot#0)
2025-10-10 15:35:56 (4244): Successfully started VM. (PID = '19724')
2025-10-10 15:35:56 (4244): Reporting VM Process ID to BOINC.
2025-10-10 15:35:56 (4244): Guest Log: BIOS: VirtualBox 7.0.8
2025-10-10 15:35:56 (4244): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 15:35:56 (4244): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 15:35:56 (4244): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 15:35:56 (4244): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 15:35:56 (4244): Detected: Web Application Enabled (http://localhost:60150)
2025-10-10 15:35:56 (4244): Detected: Remote Desktop Enabled (localhost:60151)
2025-10-10 15:35:56 (4244): Preference change detected
2025-10-10 15:35:56 (4244): Setting CPU throttle for VM. (65%)
2025-10-10 15:35:57 (4244): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 500 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 15:35:58 (4244): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 15:35:58 (4244): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 15:36:01 (4244): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 15:36:01 (4244): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 15:36:01 (4244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 15:36:10 (4244): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 15:36:10 (4244): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 15:36:16 (4244): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.000132 main     Log opened 2025-10-10T15:36:14.518459000Z
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.000212 main     OS Product: Linux
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.000244 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.000269 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.000294 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.000295 main     Process ID: 1303
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.000295 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 15:36:16 (4244): Guest Log: 00:00:00.002126 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 15:36:16 (4244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 15:36:16 (4244): Guest Log: [INFO] Mounting shared directory
2025-10-10 15:36:16 (4244): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 15:36:21 (4244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 15:36:21 (4244): Guest Log: [INFO] Detected branch: prod
2025-10-10 15:36:21 (4244): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 15:36:21 (4244): Guest Log: Copying input files
2025-10-10 15:36:22 (4244): Guest Log: Copied input files into RunAtlas.
2025-10-10 15:36:22 (4244): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 15:36:22 (4244): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 15:36:22 (4244): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 15:36:22 (4244): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 15:36:26 (4244): Guest Log: 00:00:10.003951 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 070 013 000ns (GuestNow=1 760 103 386 451 613 000 ns GuestLast=1 760 110 574 521 626 000 ns fSetTimeLastLoop=true )
2025-10-10 15:36:31 (4244): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 15:36:31 (4244): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 15:36:31 (4244): Guest Log: 2.6.3.0 1579 0 30156 151547 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 15:36:32 (4244): Guest Log: copied the webapp to /var/www
2025-10-10 15:36:32 (4244): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-10 15:36:32 (4244): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-10 15:36:32 (4244): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 15:36:32 (4244): Guest Log:  *** Starting ATLAS job. (PandaID=6837399455 taskID=46676269) ***
2025-10-10 17:15:59 (4244): Status Report: Elapsed Time: '6000.000000'
2025-10-10 17:15:59 (4244): Status Report: CPU Time: '16423.046875'
2025-10-10 18:56:02 (4244): Status Report: Elapsed Time: '12000.000000'
2025-10-10 18:56:02 (4244): Status Report: CPU Time: '34437.609375'
2025-10-10 19:58:18 (4244): Guest Log:  *** Job finished ***
2025-10-10 19:58:18 (4244): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:57:47,923 | INFO     | [job] control thread has finished
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:57:49,878 | INFO     | [data] queue_monitor thread has finished
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:12,222 | INFO     | [monitor] cgroup control has ended
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:12,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078099842880)>', '<ExcThread(monitor, started 140077506213632)>']
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:13,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:13,006 | INFO     | [monitor] control thread has ended
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:17,953 | INFO     | all workflow threads have been joined
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:17,953 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:17,953 | INFO     | traces error code: 0
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:17,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,036 [wrapper] ==== pilot stdout END ====
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,040 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,044 [wrapper] pilotpid: 5989
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,048 [wrapper] Pilot exit status: 0
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,102 [wrapper] pandaids: 6837399455
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,132 [wrapper] cleanup supervisor_pilot 14058 5990
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,149 [wrapper] Test setup, not cleaning
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,154 [wrapper] apfmon messages muted
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,158 [wrapper] ==== wrapper stdout END ====
2025-10-10 19:58:18 (4244): Guest Log: 2025-10-10 17:58:18,162 [wrapper] ==== wrapper stderr END ====
2025-10-10 19:58:18 (4244): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 19:58:18 (4244): Guest Log:     "exeErrorCode": 0,
2025-10-10 19:58:18 (4244): Guest Log:     "exeErrorDiag": "",
2025-10-10 19:58:18 (4244): Guest Log:     "pilotErrorCode": 0,
2025-10-10 19:58:18 (4244): Guest Log:     "pilotErrorDiag": "",
2025-10-10 19:58:18 (4244): Guest Log:  *** Listing of results directory ***
2025-10-10 19:58:18 (4244): Guest Log: total 200172
2025-10-10 19:58:18 (4244): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 03:28 queuedata.json
2025-10-10 19:58:18 (4244): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 03:28 pilot3.tar.gz
2025-10-10 19:58:18 (4244): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 03:29 runpilot2-wrapper.sh
2025-10-10 19:58:18 (4244): Guest Log: -rwxr-xr-x. 1 atlas atlas      8740 Oct 10 13:36 init_data.xml
2025-10-10 19:58:18 (4244): Guest Log: -rwxr-xr-x. 1 atlas atlas    569680 Oct 10 13:36 input.tar.gz
2025-10-10 19:58:18 (4244): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 13:36 start_atlas.sh
2025-10-10 19:58:18 (4244): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 13:36 EVNT.46676267._001281.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 19:58:18 (4244): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 10 13:36 pandaJob.out
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas    975525 Oct 10 13:38 agis_schedconf.cvmfs.json
2025-10-10 19:58:18 (4244): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 13:38 pilot3
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas 196471110 Oct 10 17:57 HITS.46676269._031421.pool.root.1
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 17:57 pilot_heartbeat.json
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 10 17:57 memory_monitor_summary.json
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 17:57 agis_ddmendpoints.agis.ALL.json
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas    394104 Oct 10 17:57 log.46676269._031421.job.log.tgz.1
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas      7826 Oct 10 17:57 heartbeat.json
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 10 17:58 pilotlog.txt
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas   1939715 Oct 10 17:58 log.46676269._031421.job.log.1
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 17:58 output.list
2025-10-10 19:58:18 (4244): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 17:58 runtime_log
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas   2355200 Oct 10 17:58 result.tar.gz
2025-10-10 19:58:18 (4244): Guest Log: -rw-r--r--. 1 atlas atlas      8655 Oct 10 17:58 runtime_log.err
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas       663 Oct 10 17:58 RjGNDmwzIR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiAcNDmDU4G8n.diag
2025-10-10 19:58:18 (4244): Guest Log: Looking for outputfile HITS.46676269._031421.pool.root.1
2025-10-10 19:58:18 (4244): Guest Log: HITS file was successfully produced
2025-10-10 19:58:18 (4244): Guest Log: -rw-------. 1 atlas atlas 196471110 Oct 10 17:57 /home/atlas/RunAtlas/HITS.46676269._031421.pool.root.1
2025-10-10 19:58:20 (4244): Guest Log: Successfully finished the ATLAS job!
2025-10-10 19:58:20 (4244): Guest Log: Copying the results back to the shared directory!
2025-10-10 19:58:20 (4244): Guest Log:  *** Contents of shared directory: ***
2025-10-10 19:58:20 (4244): Guest Log: total 409740
2025-10-10 19:58:20 (4244): Guest Log: -rwxrwxrwx. 1 root root 220140842 Oct 10 13:35 ATLAS.root_0
2025-10-10 19:58:20 (4244): Guest Log: -rwxrwxrwx. 1 root root 196471110 Oct 10 17:58 HITS.pool.root.1
2025-10-10 19:58:20 (4244): Guest Log: -rwxrwxrwx. 1 root root      8740 Oct 10 13:35 init_data.xml
2025-10-10 19:58:20 (4244): Guest Log: -rwxrwxrwx. 1 root root    569680 Oct 10 08:59 input.tar.gz
2025-10-10 19:58:20 (4244): Guest Log: -rwxrwxrwx. 1 root root   2355200 Oct 10 17:58 result.tar.gz
2025-10-10 19:58:20 (4244): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 08:59 start_atlas.sh
2025-10-10 19:58:20 (4244): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 19:58:20 (4244): VM Completion File Detected.
2025-10-10 19:58:20 (4244): Powering off VM.
2025-10-10 19:58:21 (4244): Successfully stopped VM.
2025-10-10 19:58:21 (4244): Deregistering VM. (boinc_225818c1661037b5, slot#0)
2025-10-10 19:58:21 (4244): Removing network bandwidth throttle group from VM.
2025-10-10 19:58:21 (4244): Removing VM from VirtualBox.
2025-10-10 19:58:27 (4244): called boinc_finish(0)

</stderr_txt>
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